RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
SHPRH-206ENST00000438092 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.33
SHPRH-206ENST00000438092 NACADO15069 1562 aa12.96□□□□□ -0.33
SHPRH-206ENST00000438092 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.34
SHPRH-206ENST00000438092 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
SHPRH-206ENST00000438092 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
SHPRH-206ENST00000438092 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
SHPRH-206ENST00000438092 TERF2IPQ9NYB0 399 aa12.95□□□□□ -0.34
SHPRH-206ENST00000438092 PES1O00541 588 aaKnown RBP12.93□□□□□ -0.34
SHPRH-206ENST00000438092 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-206ENST00000438092 RILPL2Q969X0 211 aa12.93□□□□□ -0.34
SHPRH-206ENST00000438092 EIF2S2P20042 333 aaKnown RBP12.92□□□□□ -0.34
SHPRH-206ENST00000438092 L1TD1Q5T7N2 865 aaKnown RBP12.92□□□□□ -0.34
SHPRH-206ENST00000438092 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-206ENST00000438092 A0A0U1RQG5 324 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-206ENST00000438092 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
SHPRH-206ENST00000438092 C1orf141Q5JVX7 400 aa12.9□□□□□ -0.34
SHPRH-206ENST00000438092 TCERG1O14776 1098 aaKnown RBP12.9□□□□□ -0.34
SHPRH-206ENST00000438092 GBP4Q96PP9 640 aa12.9□□□□□ -0.34
SHPRH-206ENST00000438092 ANKRD30AQ9BXX3 1397 aa12.9□□□□□ -0.35
SHPRH-206ENST00000438092 EIF3AQ14152 1382 aaKnown RBP12.89□□□□□ -0.35
SHPRH-206ENST00000438092 MINK1Q8N4C8 1332 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-206ENST00000438092 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
SHPRH-206ENST00000438092 BAZ1AQ9NRL2 1556 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-206ENST00000438092 HMMRO75330 724 aa12.88□□□□□ -0.35
SHPRH-206ENST00000438092 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
SHPRH-206ENST00000438092 PMFBP1Q8TBY8 1022 aa12.87□□□□□ -0.35
SHPRH-206ENST00000438092 RBM19Q9Y4C8 960 aaKnown RBP12.87□□□□□ -0.35
SHPRH-206ENST00000438092 TPM4P67936 248 aa12.87□□□□□ -0.35
SHPRH-206ENST00000438092 SF3A1Q15459 793 aaKnown RBP12.87□□□□□ -0.35
SHPRH-206ENST00000438092 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
SHPRH-206ENST00000438092 RALBP1Q15311 655 aa12.86□□□□□ -0.35
SHPRH-206ENST00000438092 CENPJQ9HC77 1338 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-206ENST00000438092 PLIN1O60240 522 aa12.86□□□□□ -0.35
SHPRH-206ENST00000438092 L3MBTL2Q969R5 705 aa12.86□□□□□ -0.35
SHPRH-206ENST00000438092 NUTM2GQ5VZR2 741 aa12.85□□□□□ -0.35
SHPRH-206ENST00000438092 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
SHPRH-206ENST00000438092 FHOD3Q2V2M9 1422 aa12.85□□□□□ -0.35
SHPRH-206ENST00000438092 ANKRD45Q5TZF3 282 aa12.84□□□□□ -0.35
SHPRH-206ENST00000438092 COG3Q96JB2 828 aa12.84□□□□□ -0.35
SHPRH-206ENST00000438092 KIF16BQ96L93 1317 aa12.84□□□□□ -0.35
SHPRH-206ENST00000438092 H3BQV1 296 aa12.84□□□□□ -0.35
SHPRH-206ENST00000438092 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
SHPRH-206ENST00000438092 PSME1Q06323 249 aa12.84□□□□□ -0.35
SHPRH-206ENST00000438092 PANK3Q9H999 370 aa12.84□□□□□ -0.35
SHPRH-206ENST00000438092 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.35
SHPRH-206ENST00000438092 PDS5BQ9NTI5 1447 aa12.83□□□□□ -0.36
SHPRH-206ENST00000438092 TEFQ10587 303 aa12.83□□□□□ -0.36
SHPRH-206ENST00000438092 TPD52L1Q16890 204 aaPredicted RBP12.83□□□□□ -0.36
SHPRH-206ENST00000438092 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
SHPRH-206ENST00000438092 APPP05067 770 aa12.83□□□□□ -0.36
SHPRH-206ENST00000438092 CEP89Q96ST8 783 aa12.83□□□□□ -0.36
SHPRH-206ENST00000438092 TCEAL9Q9UHQ7 104 aa12.83□□□□□ -0.36
SHPRH-206ENST00000438092 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
SHPRH-206ENST00000438092 FOSBP53539 338 aa12.82□□□□□ -0.36
SHPRH-206ENST00000438092 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
SHPRH-206ENST00000438092 VPS37DQ86XT2 251 aa12.82□□□□□ -0.36
SHPRH-206ENST00000438092 CCDC88BA6NC98 1476 aa12.82□□□□□ -0.36
SHPRH-206ENST00000438092 DHX16O60231 1041 aaKnown RBP12.82□□□□□ -0.36
SHPRH-206ENST00000438092 SYAP1Q96A49 352 aaPredicted RBP12.81□□□□□ -0.36
SHPRH-206ENST00000438092 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
SHPRH-206ENST00000438092 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
SHPRH-206ENST00000438092 AKAP17AQ02040 695 aaKnown RBP12.8□□□□□ -0.36
SHPRH-206ENST00000438092 FAM184AQ8NB25 1140 aa12.8□□□□□ -0.36
SHPRH-206ENST00000438092 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
SHPRH-206ENST00000438092 FYB1O15117 783 aa12.8□□□□□ -0.36
SHPRH-206ENST00000438092 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
SHPRH-206ENST00000438092 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
SHPRH-206ENST00000438092 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
SHPRH-206ENST00000438092 KDM4AO75164 1064 aa12.8□□□□□ -0.36
SHPRH-206ENST00000438092 USP35Q9P2H5 1018 aa12.8□□□□□ -0.36
SHPRH-206ENST00000438092 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
SHPRH-206ENST00000438092 CWC22Q9HCG8 908 aaKnown RBP12.79□□□□□ -0.36
SHPRH-206ENST00000438092 MTMR7Q9Y216 660 aa12.79□□□□□ -0.36
SHPRH-206ENST00000438092 NOL10Q9BSC4 688 aaKnown RBP12.79□□□□□ -0.36
SHPRH-206ENST00000438092 CCDC34Q96HJ3 373 aa12.79□□□□□ -0.36
SHPRH-206ENST00000438092 FAM177BA6PVY3 158 aa12.79□□□□□ -0.36
SHPRH-206ENST00000438092 CHMP4AQ9BY43 222 aa12.78□□□□□ -0.36
SHPRH-206ENST00000438092 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
SHPRH-206ENST00000438092 HDAC5Q9UQL6 1122 aa12.78□□□□□ -0.36
SHPRH-206ENST00000438092 KRI1Q8N9T8 703 aaKnown RBP12.78□□□□□ -0.36
SHPRH-206ENST00000438092 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.36
SHPRH-206ENST00000438092 VPS8Q8N3P4 1428 aa12.77□□□□□ -0.36
SHPRH-206ENST00000438092 AIMP1Q12904 312 aaKnown RBP12.77□□□□□ -0.37
SHPRH-206ENST00000438092 FMN1Q68DA7 1419 aa12.77□□□□□ -0.37
SHPRH-206ENST00000438092 ST18O60284 1047 aa12.76□□□□□ -0.37
SHPRH-206ENST00000438092 HMOX1P09601 288 aa12.76□□□□□ -0.37
SHPRH-206ENST00000438092 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
SHPRH-206ENST00000438092 NEXNQ0ZGT2 675 aa12.75□□□□□ -0.37
SHPRH-206ENST00000438092 GOLGA6L3A6NEY3 463 aa12.75□□□□□ -0.37
SHPRH-206ENST00000438092 TPM3P06753 285 aa12.75□□□□□ -0.37
SHPRH-206ENST00000438092 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
SHPRH-206ENST00000438092 CSPP1Q1MSJ5 1256 aa12.75□□□□□ -0.37
SHPRH-206ENST00000438092 SYNE3Q6ZMZ3 975 aa12.74□□□□□ -0.37
SHPRH-206ENST00000438092 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
SHPRH-206ENST00000438092 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-206ENST00000438092 WIZO95785 1651 aa12.74□□□□□ -0.37
SHPRH-206ENST00000438092 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
SHPRH-206ENST00000438092 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
SHPRH-206ENST00000438092 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms