RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 RIOK3O14730 519 aaKnown RBP11.58□□□□□ -0.56
TOP3B-208ENST00000437929 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-208ENST00000437929 ARHGEF12Q9NZN5 1544 aa11.57□□□□□ -0.56
TOP3B-208ENST00000437929 C9orf84Q5VXU9 1444 aa11.56□□□□□ -0.56
TOP3B-208ENST00000437929 PLCH2O75038 1416 aa11.55□□□□□ -0.56
TOP3B-208ENST00000437929 STRCQ7RTU9 1775 aa11.55□□□□□ -0.56
TOP3B-208ENST00000437929 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
TOP3B-208ENST00000437929 CFAP44Q96MT7 982 aa11.55□□□□□ -0.56
TOP3B-208ENST00000437929 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
TOP3B-208ENST00000437929 ATP10AO60312 1499 aa11.55□□□□□ -0.56
TOP3B-208ENST00000437929 SOCS7O14512 581 aa11.54□□□□□ -0.56
TOP3B-208ENST00000437929 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-208ENST00000437929 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
TOP3B-208ENST00000437929 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.56
TOP3B-208ENST00000437929 SPATA31D1Q6ZQQ2 1576 aa11.52□□□□□ -0.57
TOP3B-208ENST00000437929 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.57
TOP3B-208ENST00000437929 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
TOP3B-208ENST00000437929 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
TOP3B-208ENST00000437929 MYT1LQ9UL68 1186 aa11.51□□□□□ -0.57
TOP3B-208ENST00000437929 KIF14Q15058 1648 aa11.5□□□□□ -0.57
TOP3B-208ENST00000437929 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
TOP3B-208ENST00000437929 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
TOP3B-208ENST00000437929 AFAP1Q8N556 730 aa11.49□□□□□ -0.57
TOP3B-208ENST00000437929 ZNF518AQ6AHZ1 1483 aa11.49□□□□□ -0.57
TOP3B-208ENST00000437929 STK25O00506 426 aa11.48□□□□□ -0.57
TOP3B-208ENST00000437929 EEA1Q15075 1411 aa11.48□□□□□ -0.57
TOP3B-208ENST00000437929 ARHGAP5Q13017 1502 aa11.48□□□□□ -0.57
TOP3B-208ENST00000437929 DIP2CQ9Y2E4 1556 aa11.48□□□□□ -0.57
TOP3B-208ENST00000437929 C3P01024 1663 aa11.47□□□□□ -0.57
TOP3B-208ENST00000437929 ABCA6Q8N139 1617 aa11.47□□□□□ -0.57
TOP3B-208ENST00000437929 KDM5CP41229 1560 aa11.47□□□□□ -0.57
TOP3B-208ENST00000437929 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
TOP3B-208ENST00000437929 PTPRTO14522 1441 aa11.45□□□□□ -0.58
TOP3B-208ENST00000437929 LTBP4Q8N2S1 1624 aa11.45□□□□□ -0.58
TOP3B-208ENST00000437929 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.44□□□□□ -0.58
TOP3B-208ENST00000437929 ZFP91Q96JP5 570 aaPredicted RBP11.44□□□□□ -0.58
TOP3B-208ENST00000437929 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
TOP3B-208ENST00000437929 CDK11AQ9UQ88 783 aaPredicted RBP11.43□□□□□ -0.58
TOP3B-208ENST00000437929 STK24Q9Y6E0 443 aa11.43□□□□□ -0.58
TOP3B-208ENST00000437929 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
TOP3B-208ENST00000437929 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
TOP3B-208ENST00000437929 TROQ12816 1431 aaPredicted RBP11.43□□□□□ -0.58
TOP3B-208ENST00000437929 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
TOP3B-208ENST00000437929 REREQ9P2R6 1566 aa11.42□□□□□ -0.58
TOP3B-208ENST00000437929 BCL11BQ9C0K0 894 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-208ENST00000437929 CDC42BPBQ9Y5S2 1711 aa11.42□□□□□ -0.58
TOP3B-208ENST00000437929 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
TOP3B-208ENST00000437929 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
TOP3B-208ENST00000437929 LRRIQ1Q96JM4 1722 aa11.41□□□□□ -0.58
TOP3B-208ENST00000437929 UBTFP17480 764 aaKnown RBP11.41□□□□□ -0.58
TOP3B-208ENST00000437929 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
TOP3B-208ENST00000437929 CLIP1P30622 1438 aa11.41□□□□□ -0.58
TOP3B-208ENST00000437929 NCOA1Q15788 1441 aa11.41□□□□□ -0.58
TOP3B-208ENST00000437929 MLH3Q9UHC1 1453 aa11.4□□□□□ -0.58
TOP3B-208ENST00000437929 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
TOP3B-208ENST00000437929 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
TOP3B-208ENST00000437929 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
TOP3B-208ENST00000437929 ABCC1P33527 1531 aa11.4□□□□□ -0.59
TOP3B-208ENST00000437929 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.59
TOP3B-208ENST00000437929 CAMSAP1Q5T5Y3 1602 aa11.39□□□□□ -0.59
TOP3B-208ENST00000437929 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
TOP3B-208ENST00000437929 AGLP35573 1532 aa11.39□□□□□ -0.59
TOP3B-208ENST00000437929 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
TOP3B-208ENST00000437929 KIDINS220Q9ULH0 1771 aa11.38□□□□□ -0.59
TOP3B-208ENST00000437929 IQSEC2Q5JU85 1478 aa11.38□□□□□ -0.59
TOP3B-208ENST00000437929 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-208ENST00000437929 NCKAP5LQ9HCH0 1330 aa11.37□□□□□ -0.59
TOP3B-208ENST00000437929 SGIP1Q9BQI5 828 aa11.37□□□□□ -0.59
TOP3B-208ENST00000437929 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
TOP3B-208ENST00000437929 CNTLNQ9NXG0 1405 aa11.35□□□□□ -0.59
TOP3B-208ENST00000437929 NKX1-1Q15270 411 aaPredicted RBP11.35□□□□□ -0.59
TOP3B-208ENST00000437929 PDAP1Q13442 181 aaKnown RBP11.34□□□□□ -0.59
TOP3B-208ENST00000437929 ZNF777Q9ULD5 760 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-208ENST00000437929 SUPT6HQ7KZ85 1726 aaKnown RBP11.34□□□□□ -0.59
TOP3B-208ENST00000437929 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
TOP3B-208ENST00000437929 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
TOP3B-208ENST00000437929 ZMYM3Q14202 1370 aa11.33□□□□□ -0.6
TOP3B-208ENST00000437929 CDC42BPAQ5VT25 1732 aa11.33□□□□□ -0.6
TOP3B-208ENST00000437929 MAP3K13O43283 966 aa11.33□□□□□ -0.6
TOP3B-208ENST00000437929 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
TOP3B-208ENST00000437929 MYO3AQ8NEV4 1616 aa11.33□□□□□ -0.6
TOP3B-208ENST00000437929 NPATQ14207 1427 aa11.33□□□□□ -0.6
TOP3B-208ENST00000437929 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
TOP3B-208ENST00000437929 SYCP2Q9BX26 1530 aa11.32□□□□□ -0.6
TOP3B-208ENST00000437929 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
TOP3B-208ENST00000437929 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
TOP3B-208ENST00000437929 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
TOP3B-208ENST00000437929 PSEN1P49768 467 aa11.31□□□□□ -0.6
TOP3B-208ENST00000437929 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
TOP3B-208ENST00000437929 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
TOP3B-208ENST00000437929 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-208ENST00000437929 CEP170BQ9Y4F5 1589 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-208ENST00000437929 HNRNPMP52272 730 aaKnown RBP eCLIP11.3□□□□□ -0.62e-6■■■■■ 28.8
TOP3B-208ENST00000437929 CCDC18Q5T9S5 1454 aa11.3□□□□□ -0.6
TOP3B-208ENST00000437929 SPAG9O60271 1321 aaKnown RBP11.29□□□□□ -0.6
TOP3B-208ENST00000437929 CASKIN1Q8WXD9 1431 aa11.28□□□□□ -0.6
TOP3B-208ENST00000437929 PLA2R1Q13018 1463 aa11.28□□□□□ -0.6
TOP3B-208ENST00000437929 TCOF1Q13428 1488 aaKnown RBP11.28□□□□□ -0.6
TOP3B-208ENST00000437929 GGT6Q6P531 493 aa11.28□□□□□ -0.6
TOP3B-208ENST00000437929 ATP7AQ04656 1500 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms