RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 KIF14Q15058 1648 aa7.27□□□□□ -1.25
LINC01239-202ENST00000436786 TROQ12816 1431 aaPredicted RBP7.27□□□□□ -1.25
LINC01239-202ENST00000436786 ATP10AO60312 1499 aa7.26□□□□□ -1.25
LINC01239-202ENST00000436786 SPNS2Q8IVW8 549 aa7.26□□□□□ -1.25
LINC01239-202ENST00000436786 AFAP1Q8N556 730 aa7.26□□□□□ -1.25
LINC01239-202ENST00000436786 MYO5CQ9NQX4 1742 aa7.26□□□□□ -1.25
LINC01239-202ENST00000436786 PHF12Q96QT6 1004 aa7.26□□□□□ -1.25
LINC01239-202ENST00000436786 STAG3Q9UJ98 1225 aa7.26□□□□□ -1.25
LINC01239-202ENST00000436786 C9orf84Q5VXU9 1444 aa7.25□□□□□ -1.25
LINC01239-202ENST00000436786 ARHGAP5Q13017 1502 aa7.25□□□□□ -1.25
LINC01239-202ENST00000436786 CLIP1P30622 1438 aa7.25□□□□□ -1.25
LINC01239-202ENST00000436786 LRRIQ1Q96JM4 1722 aa7.24□□□□□ -1.25
LINC01239-202ENST00000436786 CEBPAP49715 358 aaPredicted RBP7.24□□□□□ -1.25
LINC01239-202ENST00000436786 MYT1LQ9UL68 1186 aa7.24□□□□□ -1.25
LINC01239-202ENST00000436786 ZNF518AQ6AHZ1 1483 aa7.24□□□□□ -1.25
LINC01239-202ENST00000436786 ARHGEF12Q9NZN5 1544 aa7.23□□□□□ -1.25
LINC01239-202ENST00000436786 CASKIN1Q8WXD9 1431 aa7.23□□□□□ -1.25
LINC01239-202ENST00000436786 FER1L4A9Z1Z3 1794 aa7.23□□□□□ -1.25
LINC01239-202ENST00000436786 KDM5CP41229 1560 aa7.22□□□□□ -1.25
LINC01239-202ENST00000436786 TRAPPC8Q9Y2L5 1435 aa7.21□□□□□ -1.25
LINC01239-202ENST00000436786 CDC42BPBQ9Y5S2 1711 aa7.21□□□□□ -1.26
LINC01239-202ENST00000436786 CCDC18Q5T9S5 1454 aa7.21□□□□□ -1.26
LINC01239-202ENST00000436786 MLH3Q9UHC1 1453 aa7.21□□□□□ -1.26
LINC01239-202ENST00000436786 DIP2CQ9Y2E4 1556 aa7.21□□□□□ -1.26
LINC01239-202ENST00000436786 CREBZFQ9NS37 354 aa7.2□□□□□ -1.26
LINC01239-202ENST00000436786 CERKQ8TCT0 537 aa7.19□□□□□ -1.26
LINC01239-202ENST00000436786 PREX2Q70Z35 1606 aa7.19□□□□□ -1.26
LINC01239-202ENST00000436786 ABCA6Q8N139 1617 aa7.19□□□□□ -1.26
LINC01239-202ENST00000436786 ABCC1P33527 1531 aa7.19□□□□□ -1.26
LINC01239-202ENST00000436786 ZNF777Q9ULD5 760 aaPredicted RBP7.19□□□□□ -1.26
LINC01239-202ENST00000436786 REREQ9P2R6 1566 aa7.19□□□□□ -1.26
LINC01239-202ENST00000436786 FYCO1Q9BQS8 1478 aa7.18□□□□□ -1.26
LINC01239-202ENST00000436786 PREX1Q8TCU6 1659 aa7.18□□□□□ -1.26
LINC01239-202ENST00000436786 ITSN2Q9NZM3 1697 aa7.18□□□□□ -1.26
LINC01239-202ENST00000436786 ESF1Q9H501 851 aaKnown RBP7.18□□□□□ -1.26
LINC01239-202ENST00000436786 AGLP35573 1532 aa7.18□□□□□ -1.26
LINC01239-202ENST00000436786 HNRNPMP52272 730 aaKnown RBP eCLIP7.17□□□□□ -1.26
LINC01239-202ENST00000436786 UHRF1BP1Q6BDS2 1440 aa7.17□□□□□ -1.26
LINC01239-202ENST00000436786 CDC42BPAQ5VT25 1732 aa7.17□□□□□ -1.26
LINC01239-202ENST00000436786 GPATCH8Q9UKJ3 1502 aaKnown RBP7.17□□□□□ -1.26
LINC01239-202ENST00000436786 MS4A3Q96HJ5 214 aa7.16□□□□□ -1.26
LINC01239-202ENST00000436786 TMEM121BQ9BXQ6 578 aaPredicted RBP7.16□□□□□ -1.26
LINC01239-202ENST00000436786 KIDINS220Q9ULH0 1771 aa7.16□□□□□ -1.26
LINC01239-202ENST00000436786 SPAG9O60271 1321 aaKnown RBP7.16□□□□□ -1.26
LINC01239-202ENST00000436786 SLC4A1APQ9BWU0 796 aaKnown RBP7.16□□□□□ -1.26
LINC01239-202ENST00000436786 SAMD9LQ8IVG5 1584 aa7.16□□□□□ -1.26
LINC01239-202ENST00000436786 CFDP1Q9UEE9 299 aaPredicted RBP7.15□□□□□ -1.26
LINC01239-202ENST00000436786 C3P01024 1663 aa7.15□□□□□ -1.26
LINC01239-202ENST00000436786 STRCQ7RTU9 1775 aa7.15□□□□□ -1.26
LINC01239-202ENST00000436786 SYCP2Q9BX26 1530 aa7.15□□□□□ -1.27
LINC01239-202ENST00000436786 CCNB3Q8WWL7 1395 aa7.14□□□□□ -1.27
LINC01239-202ENST00000436786 CNTLNQ9NXG0 1405 aa7.14□□□□□ -1.27
LINC01239-202ENST00000436786 KIAA1107Q9UPP5 1409 aa7.14□□□□□ -1.27
LINC01239-202ENST00000436786 ZMYM3Q14202 1370 aa7.13□□□□□ -1.27
LINC01239-202ENST00000436786 MTUS2Q5JR59 1369 aa7.13□□□□□ -1.27
LINC01239-202ENST00000436786 ZNF644Q9H582 1327 aaPredicted RBP7.13□□□□□ -1.27
LINC01239-202ENST00000436786 ST18O60284 1047 aa7.13□□□□□ -1.27
LINC01239-202ENST00000436786 PLEKHH2Q8IVE3 1493 aa7.12□□□□□ -1.27
LINC01239-202ENST00000436786 PTPRTO14522 1441 aa7.12□□□□□ -1.27
LINC01239-202ENST00000436786 ATP7AQ04656 1500 aa7.12□□□□□ -1.27
LINC01239-202ENST00000436786 A2MP01023 1474 aa7.12□□□□□ -1.27
LINC01239-202ENST00000436786 SUPT6HQ7KZ85 1726 aaKnown RBP7.11□□□□□ -1.27
LINC01239-202ENST00000436786 SNPHO15079 494 aa7.11□□□□□ -1.27
LINC01239-202ENST00000436786 GGT6Q6P531 493 aa7.11□□□□□ -1.27
LINC01239-202ENST00000436786 SETD1BQ9UPS6 1966 aaKnown RBP7.11□□□□□ -1.27
LINC01239-202ENST00000436786 NPATQ14207 1427 aa7.11□□□□□ -1.27
LINC01239-202ENST00000436786 NCOA1Q15788 1441 aa7.11□□□□□ -1.27
LINC01239-202ENST00000436786 INO80Q9ULG1 1556 aaPredicted RBP7.11□□□□□ -1.27
LINC01239-202ENST00000436786 SEC24BO95487 1268 aa7.11□□□□□ -1.27
LINC01239-202ENST00000436786 ATN1P54259 1190 aaPredicted RBP7.11□□□□□ -1.27
LINC01239-202ENST00000436786 PLXNC1O60486 1568 aa7.1□□□□□ -1.27
LINC01239-202ENST00000436786 NCKAP5LQ9HCH0 1330 aa7.1□□□□□ -1.27
LINC01239-202ENST00000436786 MROH2AA6NES4 1674 aa7.1□□□□□ -1.27
LINC01239-202ENST00000436786 MBD5Q9P267 1494 aa7.1□□□□□ -1.27
LINC01239-202ENST00000436786 TIAM1Q13009 1591 aa7.09□□□□□ -1.27
LINC01239-202ENST00000436786 CLTCQ00610 1675 aaKnown RBP7.09□□□□□ -1.27
LINC01239-202ENST00000436786 CAMSAP1Q5T5Y3 1602 aa7.09□□□□□ -1.27
LINC01239-202ENST00000436786 PTPRKQ15262 1439 aa7.09□□□□□ -1.27
LINC01239-202ENST00000436786 CEP162Q5TB80 1403 aa7.09□□□□□ -1.27
LINC01239-202ENST00000436786 LTBP4Q8N2S1 1624 aa7.09□□□□□ -1.27
LINC01239-202ENST00000436786 EHBP1L1Q8N3D4 1523 aa7.08□□□□□ -1.28
LINC01239-202ENST00000436786 SLAIN1Q8ND83 568 aa7.07□□□□□ -1.28
LINC01239-202ENST00000436786 DHX29Q7Z478 1369 aaKnown RBP7.07□□□□□ -1.28
LINC01239-202ENST00000436786 RTEL1-TNFRSF6BF6WH68 1400 aa7.07□□□□□ -1.28
LINC01239-202ENST00000436786 ADGBQ8N7X0 1667 aa7.07□□□□□ -1.28
LINC01239-202ENST00000436786 MYO3AQ8NEV4 1616 aa7.07□□□□□ -1.28
LINC01239-202ENST00000436786 PKD2Q13563 968 aa7.06□□□□□ -1.28
LINC01239-202ENST00000436786 ZNF335Q9H4Z2 1342 aaPredicted RBP7.06□□□□□ -1.28
LINC01239-202ENST00000436786 NCOA2Q15596 1464 aa7.06□□□□□ -1.28
LINC01239-202ENST00000436786 KIF3BO15066 747 aa7.06□□□□□ -1.28
LINC01239-202ENST00000436786 CEP170BQ9Y4F5 1589 aaPredicted RBP7.05□□□□□ -1.28
LINC01239-202ENST00000436786 DISP3Q9P2K9 1392 aa7.05□□□□□ -1.28
LINC01239-202ENST00000436786 FBXO31Q5XUX0 539 aaPredicted RBP7.05□□□□□ -1.28
LINC01239-202ENST00000436786 CAMSAP2Q08AD1 1489 aa7.05□□□□□ -1.28
LINC01239-202ENST00000436786 PLA2R1Q13018 1463 aa7.05□□□□□ -1.28
LINC01239-202ENST00000436786 LOC105371045A0A1W2PR82 267 aa7.05□□□□□ -1.28
LINC01239-202ENST00000436786 TIE1P35590 1138 aa7.05□□□□□ -1.28
LINC01239-202ENST00000436786 RSPH4AQ5TD94 716 aa7.05□□□□□ -1.28
LINC01239-202ENST00000436786 ZNF142P52746 1687 aaPredicted RBP7.05□□□□□ -1.28
LINC01239-202ENST00000436786 TCOF1Q13428 1488 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms