RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.32
HMGCL-204ENST00000436439 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.32
HMGCL-204ENST00000436439 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.31
HMGCL-204ENST00000436439 FAM135AQ9P2D6 1515 aa17■□□□□ 0.31
HMGCL-204ENST00000436439 A2ML1A8K2U0 1454 aa17■□□□□ 0.31
HMGCL-204ENST00000436439 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
HMGCL-204ENST00000436439 PZPP20742 1482 aa16.99■□□□□ 0.31
HMGCL-204ENST00000436439 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
HMGCL-204ENST00000436439 POLR1AO95602 1720 aaPredicted RBP16.98■□□□□ 0.31
HMGCL-204ENST00000436439 MYOM3Q5VTT5 1437 aa16.98■□□□□ 0.31
HMGCL-204ENST00000436439 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
HMGCL-204ENST00000436439 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
HMGCL-204ENST00000436439 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.31
HMGCL-204ENST00000436439 PKD2Q13563 968 aa16.96■□□□□ 0.31
HMGCL-204ENST00000436439 EIF2AK4Q9P2K8 1649 aaKnown RBP16.96■□□□□ 0.31
HMGCL-204ENST00000436439 MIA2Q96PC5 1412 aa16.96■□□□□ 0.31
HMGCL-204ENST00000436439 TNRQ92752 1358 aa16.96■□□□□ 0.3
HMGCL-204ENST00000436439 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
HMGCL-204ENST00000436439 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
HMGCL-204ENST00000436439 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
HMGCL-204ENST00000436439 MROH1Q8NDA8 1641 aa16.95■□□□□ 0.3
HMGCL-204ENST00000436439 NEURL4Q96JN8 1562 aa16.95■□□□□ 0.3
HMGCL-204ENST00000436439 CEP152O94986 1710 aa16.95■□□□□ 0.3
HMGCL-204ENST00000436439 ZC3H13Q5T200 1668 aaKnown RBP16.95■□□□□ 0.3
HMGCL-204ENST00000436439 ABCC3O15438 1527 aa16.93■□□□□ 0.3
HMGCL-204ENST00000436439 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
HMGCL-204ENST00000436439 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
HMGCL-204ENST00000436439 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
HMGCL-204ENST00000436439 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.29
HMGCL-204ENST00000436439 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
HMGCL-204ENST00000436439 NLRP1Q9C000 1473 aa16.88■□□□□ 0.29
HMGCL-204ENST00000436439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.29
HMGCL-204ENST00000436439 APLP2Q06481 763 aa16.88■□□□□ 0.29
HMGCL-204ENST00000436439 ABCC5O15440 1437 aa16.88■□□□□ 0.29
HMGCL-204ENST00000436439 DEPDC5O75140 1603 aa16.86■□□□□ 0.29
HMGCL-204ENST00000436439 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
HMGCL-204ENST00000436439 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
HMGCL-204ENST00000436439 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
HMGCL-204ENST00000436439 DAPK1P53355 1430 aa16.84■□□□□ 0.29
HMGCL-204ENST00000436439 KIF15Q9NS87 1388 aa16.84■□□□□ 0.29
HMGCL-204ENST00000436439 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.29
HMGCL-204ENST00000436439 UBR1Q8IWV7 1749 aa16.83■□□□□ 0.29
HMGCL-204ENST00000436439 VWDEQ8N2E2 1590 aa16.83■□□□□ 0.28
HMGCL-204ENST00000436439 IQGAP1P46940 1657 aa16.83■□□□□ 0.28
HMGCL-204ENST00000436439 THEMISQ8N1K5 641 aaPredicted RBP16.82■□□□□ 0.28
HMGCL-204ENST00000436439 MED14O60244 1454 aa16.82■□□□□ 0.28
HMGCL-204ENST00000436439 UBAP1LF5GYI3 381 aa16.81■□□□□ 0.28
HMGCL-204ENST00000436439 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
HMGCL-204ENST00000436439 RRP7BPQ9NSQ0 103 aa16.81■□□□□ 0.28
HMGCL-204ENST00000436439 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
HMGCL-204ENST00000436439 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
HMGCL-204ENST00000436439 DISP3Q9P2K9 1392 aa16.8■□□□□ 0.28
HMGCL-204ENST00000436439 NPHP4O75161 1426 aaPredicted RBP16.8■□□□□ 0.28
HMGCL-204ENST00000436439 CPS1P31327 1500 aa16.79■□□□□ 0.28
HMGCL-204ENST00000436439 ARHGAP31Q2M1Z3 1444 aa16.77■□□□□ 0.27
HMGCL-204ENST00000436439 ILDR2Q71H61 639 aa16.77■□□□□ 0.27
HMGCL-204ENST00000436439 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.27
HMGCL-204ENST00000436439 PIK3C2BO00750 1634 aa16.76■□□□□ 0.27
HMGCL-204ENST00000436439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGCL-204ENST00000436439 ALKQ9UM73 1620 aa16.73■□□□□ 0.27
HMGCL-204ENST00000436439 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
HMGCL-204ENST00000436439 SLIT1O75093 1534 aa16.72■□□□□ 0.27
HMGCL-204ENST00000436439 LMTK2Q8IWU2 1503 aa16.72■□□□□ 0.27
HMGCL-204ENST00000436439 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
HMGCL-204ENST00000436439 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
HMGCL-204ENST00000436439 ADGRL2O95490 1459 aa16.71■□□□□ 0.27
HMGCL-204ENST00000436439 SCAF11Q99590 1463 aaKnown RBP16.7■□□□□ 0.26
HMGCL-204ENST00000436439 SYNMO15061 1565 aa16.7■□□□□ 0.26
HMGCL-204ENST00000436439 TRIM26Q12899 539 aaPredicted RBP16.7■□□□□ 0.26
HMGCL-204ENST00000436439 LTKP29376 864 aa16.69■□□□□ 0.26
HMGCL-204ENST00000436439 PIP4K2BP78356 416 aa16.69■□□□□ 0.26
HMGCL-204ENST00000436439 KANK1Q14678 1352 aa16.69■□□□□ 0.26
HMGCL-204ENST00000436439 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
HMGCL-204ENST00000436439 EFCAB6Q5THR3 1501 aa16.68■□□□□ 0.26
HMGCL-204ENST00000436439 LRRC7Q96NW7 1537 aa16.68■□□□□ 0.26
HMGCL-204ENST00000436439 XIRP1Q702N8 1843 aaKnown RBP16.68■□□□□ 0.26
HMGCL-204ENST00000436439 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
HMGCL-204ENST00000436439 TOM1O60784 492 aa16.66■□□□□ 0.26
HMGCL-204ENST00000436439 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
HMGCL-204ENST00000436439 HSPA1LP34931 641 aa16.65■□□□□ 0.26
HMGCL-204ENST00000436439 TXNDC2Q86VQ3 553 aa16.65■□□□□ 0.26
HMGCL-204ENST00000436439 NOS1P29475 1434 aa16.64■□□□□ 0.25
HMGCL-204ENST00000436439 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
HMGCL-204ENST00000436439 IDI1Q13907 227 aa16.64■□□□□ 0.25
HMGCL-204ENST00000436439 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
HMGCL-204ENST00000436439 ANKRD50Q9ULJ7 1429 aa16.63■□□□□ 0.25
HMGCL-204ENST00000436439 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
HMGCL-204ENST00000436439 TET3O43151 1660 aa16.62■□□□□ 0.25
HMGCL-204ENST00000436439 ADGRB3O60242 1522 aa16.61■□□□□ 0.25
HMGCL-204ENST00000436439 MED1Q15648 1581 aaPredicted RBP16.61■□□□□ 0.25
HMGCL-204ENST00000436439 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
HMGCL-204ENST00000436439 UNC13BO14795 1591 aa16.6■□□□□ 0.25
HMGCL-204ENST00000436439 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
HMGCL-204ENST00000436439 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
HMGCL-204ENST00000436439 SOCS7O14512 581 aa16.59■□□□□ 0.25
HMGCL-204ENST00000436439 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.24
HMGCL-204ENST00000436439 E9PCH4 1651 aa16.57■□□□□ 0.24
HMGCL-204ENST00000436439 TMEM131LA2VDJ0 1609 aa16.55■□□□□ 0.24
HMGCL-204ENST00000436439 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
HMGCL-204ENST00000436439 IQGAP3Q86VI3 1631 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms