RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 A2ML1A8K2U0 1454 aa17.56■□□□□ 0.4
SPTLC1P4-201ENST00000435997 PZPP20742 1482 aa17.56■□□□□ 0.4
SPTLC1P4-201ENST00000435997 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
SPTLC1P4-201ENST00000435997 PKD2Q13563 968 aa17.56■□□□□ 0.4
SPTLC1P4-201ENST00000435997 RSPH4AQ5TD94 716 aa17.56■□□□□ 0.4
SPTLC1P4-201ENST00000435997 NCKAP5LQ9HCH0 1330 aa17.54■□□□□ 0.4
SPTLC1P4-201ENST00000435997 MAP3K1Q13233 1512 aa17.53■□□□□ 0.4
SPTLC1P4-201ENST00000435997 DNMT1P26358 1616 aaKnown RBP17.53■□□□□ 0.4
SPTLC1P4-201ENST00000435997 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.4
SPTLC1P4-201ENST00000435997 KIF3BO15066 747 aa17.51■□□□□ 0.39
SPTLC1P4-201ENST00000435997 MAST1Q9Y2H9 1570 aa17.51■□□□□ 0.39
SPTLC1P4-201ENST00000435997 TNRQ92752 1358 aa17.51■□□□□ 0.39
SPTLC1P4-201ENST00000435997 RNF17Q9BXT8 1623 aaKnown RBP17.49■□□□□ 0.39
SPTLC1P4-201ENST00000435997 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
SPTLC1P4-201ENST00000435997 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
SPTLC1P4-201ENST00000435997 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
SPTLC1P4-201ENST00000435997 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
SPTLC1P4-201ENST00000435997 ABCC3O15438 1527 aa17.46■□□□□ 0.39
SPTLC1P4-201ENST00000435997 MYOM3Q5VTT5 1437 aa17.46■□□□□ 0.39
SPTLC1P4-201ENST00000435997 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
SPTLC1P4-201ENST00000435997 MROH1Q8NDA8 1641 aa17.44■□□□□ 0.38
SPTLC1P4-201ENST00000435997 EIF2AK4Q9P2K8 1649 aaKnown RBP17.44■□□□□ 0.38
SPTLC1P4-201ENST00000435997 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
SPTLC1P4-201ENST00000435997 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
SPTLC1P4-201ENST00000435997 TSPY4P0CV99 314 aa17.43■□□□□ 0.38
SPTLC1P4-201ENST00000435997 TSPY10P0CW01 314 aa17.43■□□□□ 0.38
SPTLC1P4-201ENST00000435997 SPATA31D1Q6ZQQ2 1576 aa17.43■□□□□ 0.38
SPTLC1P4-201ENST00000435997 ZC3H13Q5T200 1668 aaKnown RBP17.42■□□□□ 0.38
SPTLC1P4-201ENST00000435997 DISP3Q9P2K9 1392 aa17.41■□□□□ 0.38
SPTLC1P4-201ENST00000435997 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
SPTLC1P4-201ENST00000435997 MED14O60244 1454 aa17.41■□□□□ 0.38
SPTLC1P4-201ENST00000435997 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
SPTLC1P4-201ENST00000435997 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
SPTLC1P4-201ENST00000435997 CPS1P31327 1500 aa17.4■□□□□ 0.38
SPTLC1P4-201ENST00000435997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPTLC1P4-201ENST00000435997 ERVK-7P63135 1459 aa17.39■□□□□ 0.37
SPTLC1P4-201ENST00000435997 DEPDC5O75140 1603 aa17.39■□□□□ 0.37
SPTLC1P4-201ENST00000435997 DUOX2Q9NRD8 1548 aa17.38■□□□□ 0.37
SPTLC1P4-201ENST00000435997 VWDEQ8N2E2 1590 aa17.38■□□□□ 0.37
SPTLC1P4-201ENST00000435997 ILDR2Q71H61 639 aa17.38■□□□□ 0.37
SPTLC1P4-201ENST00000435997 PRDM15P57071 1507 aaPredicted RBP17.37■□□□□ 0.37
SPTLC1P4-201ENST00000435997 UBAP1LF5GYI3 381 aa17.36■□□□□ 0.37
SPTLC1P4-201ENST00000435997 ABCC5O15440 1437 aa17.36■□□□□ 0.37
SPTLC1P4-201ENST00000435997 ANKLE2Q86XL3 938 aa17.35■□□□□ 0.37
SPTLC1P4-201ENST00000435997 THEMISQ8N1K5 641 aaPredicted RBP17.35■□□□□ 0.37
SPTLC1P4-201ENST00000435997 NPHP4O75161 1426 aaPredicted RBP17.35■□□□□ 0.37
SPTLC1P4-201ENST00000435997 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
SPTLC1P4-201ENST00000435997 ARHGAP31Q2M1Z3 1444 aa17.33■□□□□ 0.36
SPTLC1P4-201ENST00000435997 KIF15Q9NS87 1388 aa17.33■□□□□ 0.36
SPTLC1P4-201ENST00000435997 MSH5O43196 834 aa17.33■□□□□ 0.36
SPTLC1P4-201ENST00000435997 CROCC2H7BZ55 1655 aa17.32■□□□□ 0.36
SPTLC1P4-201ENST00000435997 PTPN23Q9H3S7 1636 aa17.31■□□□□ 0.36
SPTLC1P4-201ENST00000435997 DAPK1P53355 1430 aa17.3■□□□□ 0.36
SPTLC1P4-201ENST00000435997 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
SPTLC1P4-201ENST00000435997 ALKQ9UM73 1620 aa17.3■□□□□ 0.36
SPTLC1P4-201ENST00000435997 FGD6Q6ZV73 1430 aa17.3■□□□□ 0.36
SPTLC1P4-201ENST00000435997 CEP152O94986 1710 aa17.29■□□□□ 0.36
SPTLC1P4-201ENST00000435997 ARHGAP23Q9P227 1491 aa17.29■□□□□ 0.36
SPTLC1P4-201ENST00000435997 SLIT1O75093 1534 aa17.27■□□□□ 0.36
SPTLC1P4-201ENST00000435997 SOCS7O14512 581 aa17.27■□□□□ 0.36
SPTLC1P4-201ENST00000435997 UBR1Q8IWV7 1749 aa17.27■□□□□ 0.35
SPTLC1P4-201ENST00000435997 SCAF11Q99590 1463 aaKnown RBP17.26■□□□□ 0.35
SPTLC1P4-201ENST00000435997 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
SPTLC1P4-201ENST00000435997 SYNMO15061 1565 aa17.25■□□□□ 0.35
SPTLC1P4-201ENST00000435997 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
SPTLC1P4-201ENST00000435997 TOM1O60784 492 aa17.23■□□□□ 0.35
SPTLC1P4-201ENST00000435997 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
SPTLC1P4-201ENST00000435997 STRCP1A6NGW2 1772 aa17.23■□□□□ 0.35
SPTLC1P4-201ENST00000435997 HSPA1LP34931 641 aa17.22■□□□□ 0.35
SPTLC1P4-201ENST00000435997 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
SPTLC1P4-201ENST00000435997 ANKRD30AQ9BXX3 1397 aa17.2■□□□□ 0.34
SPTLC1P4-201ENST00000435997 LTKP29376 864 aa17.2■□□□□ 0.34
SPTLC1P4-201ENST00000435997 MED1Q15648 1581 aaPredicted RBP17.19■□□□□ 0.34
SPTLC1P4-201ENST00000435997 TMEM2Q9UHN6 1383 aa17.18■□□□□ 0.34
SPTLC1P4-201ENST00000435997 EFCAB6Q5THR3 1501 aa17.18■□□□□ 0.34
SPTLC1P4-201ENST00000435997 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
SPTLC1P4-201ENST00000435997 APLP2Q06481 763 aa17.18■□□□□ 0.34
SPTLC1P4-201ENST00000435997 NOS1P29475 1434 aa17.18■□□□□ 0.34
SPTLC1P4-201ENST00000435997 PIK3C2BO00750 1634 aa17.18■□□□□ 0.34
SPTLC1P4-201ENST00000435997 KANK1Q14678 1352 aa17.17■□□□□ 0.34
SPTLC1P4-201ENST00000435997 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
SPTLC1P4-201ENST00000435997 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
SPTLC1P4-201ENST00000435997 TXNDC2Q86VQ3 553 aa17.14■□□□□ 0.33
SPTLC1P4-201ENST00000435997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPTLC1P4-201ENST00000435997 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
SPTLC1P4-201ENST00000435997 ADGRB3O60242 1522 aa17.12■□□□□ 0.33
SPTLC1P4-201ENST00000435997 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
SPTLC1P4-201ENST00000435997 IDI1Q13907 227 aa17.11■□□□□ 0.33
SPTLC1P4-201ENST00000435997 ANKRD50Q9ULJ7 1429 aa17.11■□□□□ 0.33
SPTLC1P4-201ENST00000435997 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
SPTLC1P4-201ENST00000435997 TET3O43151 1660 aa17.1■□□□□ 0.33
SPTLC1P4-201ENST00000435997 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.32
SPTLC1P4-201ENST00000435997 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
SPTLC1P4-201ENST00000435997 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
SPTLC1P4-201ENST00000435997 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
SPTLC1P4-201ENST00000435997 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
SPTLC1P4-201ENST00000435997 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
SPTLC1P4-201ENST00000435997 UNC13BO14795 1591 aa17.05■□□□□ 0.32
SPTLC1P4-201ENST00000435997 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
SPTLC1P4-201ENST00000435997 STAG3Q9UJ98 1225 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms