RNA–Protein interactions for RNA: ENST00000435981.5

LINC01393-202, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 1 (best) BASIC

Gene LINC01393, Length 1,187 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-202ENST00000435981 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
LINC01393-202ENST00000435981 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
LINC01393-202ENST00000435981 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
LINC01393-202ENST00000435981 LCE2BO14633 110 aa13.17□□□□□ -0.3
LINC01393-202ENST00000435981 ZBED2Q9BTP6 218 aa13.17□□□□□ -0.3
LINC01393-202ENST00000435981 NBPF3Q9H094 633 aa13.17□□□□□ -0.3
LINC01393-202ENST00000435981 PTPREP23469 700 aa13.15□□□□□ -0.3
LINC01393-202ENST00000435981 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
LINC01393-202ENST00000435981 MAP3K9P80192 1104 aa13.14□□□□□ -0.31
LINC01393-202ENST00000435981 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
LINC01393-202ENST00000435981 SHROOM4Q9ULL8 1493 aa13.11□□□□□ -0.31
LINC01393-202ENST00000435981 NYAP1Q6ZVC0 841 aa13.09□□□□□ -0.31
LINC01393-202ENST00000435981 GFRA3O60609 400 aa13.08□□□□□ -0.32
LINC01393-202ENST00000435981 PCDHGA10Q9Y5H3 936 aa13.07□□□□□ -0.32
LINC01393-202ENST00000435981 KCNC4Q03721 635 aa13.05□□□□□ -0.32
LINC01393-202ENST00000435981 ANKK1Q8NFD2 765 aa13.05□□□□□ -0.32
LINC01393-202ENST00000435981 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
LINC01393-202ENST00000435981 CAMK2BQ13554 666 aa13.02□□□□□ -0.33
LINC01393-202ENST00000435981 COL9A1P20849 921 aa13□□□□□ -0.33
LINC01393-202ENST00000435981 PPP1R3GB7ZBB8 358 aa12.99□□□□□ -0.33
LINC01393-202ENST00000435981 NRG2O14511 850 aaPredicted RBP12.98□□□□□ -0.33
LINC01393-202ENST00000435981 DPYSL4O14531 572 aa12.98□□□□□ -0.33
LINC01393-202ENST00000435981 PHF14O94880 888 aa12.98□□□□□ -0.33
LINC01393-202ENST00000435981 PROX2Q3B8N5 592 aa12.98□□□□□ -0.33
LINC01393-202ENST00000435981 TYW1BQ6NUM6 668 aa12.97□□□□□ -0.33
LINC01393-202ENST00000435981 SOWAHBA6NEL2 793 aa12.96□□□□□ -0.33
LINC01393-202ENST00000435981 ZNF787Q6DD87 383 aa12.96□□□□□ -0.33
LINC01393-202ENST00000435981 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.33
LINC01393-202ENST00000435981 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
LINC01393-202ENST00000435981 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
LINC01393-202ENST00000435981 BCAMP50895 628 aa12.93□□□□□ -0.34
LINC01393-202ENST00000435981 LAPTM4BQ86VI4 370 aa12.93□□□□□ -0.34
LINC01393-202ENST00000435981 ZNF775Q96BV0 537 aaPredicted RBP12.9□□□□□ -0.34
LINC01393-202ENST00000435981 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
LINC01393-202ENST00000435981 EPAS1Q99814 870 aa12.88□□□□□ -0.35
LINC01393-202ENST00000435981 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
LINC01393-202ENST00000435981 DDX12PQ92771 950 aa12.87□□□□□ -0.35
LINC01393-202ENST00000435981 KIAA1468Q9P260 1216 aa12.86□□□□□ -0.35
LINC01393-202ENST00000435981 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
LINC01393-202ENST00000435981 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
LINC01393-202ENST00000435981 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
LINC01393-202ENST00000435981 SPRYD3Q8NCJ5 442 aa12.82□□□□□ -0.36
LINC01393-202ENST00000435981 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
LINC01393-202ENST00000435981 SEPT9Q9UHD8 586 aaPredicted RBP12.81□□□□□ -0.36
LINC01393-202ENST00000435981 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
LINC01393-202ENST00000435981 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
LINC01393-202ENST00000435981 PDIA6Q15084 440 aa12.8□□□□□ -0.36
LINC01393-202ENST00000435981 NBR1Q14596 966 aa12.78□□□□□ -0.36
LINC01393-202ENST00000435981 EN1Q05925 392 aaPredicted RBP12.77□□□□□ -0.37
LINC01393-202ENST00000435981 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
LINC01393-202ENST00000435981 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
LINC01393-202ENST00000435981 EIF4G1Q04637 1599 aaKnown RBP12.76□□□□□ -0.37
LINC01393-202ENST00000435981 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.75□□□□□ -0.37
LINC01393-202ENST00000435981 MAP3K7O43318 606 aa12.73□□□□□ -0.37
LINC01393-202ENST00000435981 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
LINC01393-202ENST00000435981 BAZ1AQ9NRL2 1556 aaPredicted RBP12.73□□□□□ -0.37
LINC01393-202ENST00000435981 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
LINC01393-202ENST00000435981 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
LINC01393-202ENST00000435981 E2F4Q16254 413 aa12.72□□□□□ -0.37
LINC01393-202ENST00000435981 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
LINC01393-202ENST00000435981 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
LINC01393-202ENST00000435981 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
LINC01393-202ENST00000435981 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
LINC01393-202ENST00000435981 CFAP44Q96MT7 982 aa12.71□□□□□ -0.37
LINC01393-202ENST00000435981 PDZRN3Q9UPQ7 1066 aa12.7□□□□□ -0.38
LINC01393-202ENST00000435981 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
LINC01393-202ENST00000435981 HPS5Q9UPZ3 1129 aa12.69□□□□□ -0.38
LINC01393-202ENST00000435981 CECR2Q9BXF3 1484 aa12.69□□□□□ -0.38
LINC01393-202ENST00000435981 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
LINC01393-202ENST00000435981 ARIH1Q9Y4X5 557 aaPredicted RBP12.68□□□□□ -0.38
LINC01393-202ENST00000435981 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
LINC01393-202ENST00000435981 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
LINC01393-202ENST00000435981 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
LINC01393-202ENST00000435981 GRXCR2A6NFK2 248 aa12.65□□□□□ -0.38
LINC01393-202ENST00000435981 TJAP1Q5JTD0 557 aa12.65□□□□□ -0.38
LINC01393-202ENST00000435981 PPP1R18Q6NYC8 613 aa12.64□□□□□ -0.39
LINC01393-202ENST00000435981 PACS2Q86VP3 889 aa12.64□□□□□ -0.39
LINC01393-202ENST00000435981 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
LINC01393-202ENST00000435981 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
LINC01393-202ENST00000435981 SMAPO00193 183 aa12.63□□□□□ -0.39
LINC01393-202ENST00000435981 WDR70Q9NW82 654 aa12.62□□□□□ -0.39
LINC01393-202ENST00000435981 PRSS12P56730 875 aa12.61□□□□□ -0.39
LINC01393-202ENST00000435981 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
LINC01393-202ENST00000435981 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
LINC01393-202ENST00000435981 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
LINC01393-202ENST00000435981 OSBPP22059 807 aa12.59□□□□□ -0.39
LINC01393-202ENST00000435981 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.59□□□□□ -0.39
LINC01393-202ENST00000435981 PPP4CP60510 307 aa12.57□□□□□ -0.4
LINC01393-202ENST00000435981 CERKQ8TCT0 537 aa12.57□□□□□ -0.4
LINC01393-202ENST00000435981 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
LINC01393-202ENST00000435981 SAMD7Q7Z3H4 446 aa12.56□□□□□ -0.4
LINC01393-202ENST00000435981 TATDN2Q93075 761 aa12.55□□□□□ -0.4
LINC01393-202ENST00000435981 PNMA3Q9UL41 463 aa12.55□□□□□ -0.4
LINC01393-202ENST00000435981 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
LINC01393-202ENST00000435981 TREML4Q6UXN2 200 aa12.53□□□□□ -0.4
LINC01393-202ENST00000435981 RSF1Q96T23 1441 aaPredicted RBP12.53□□□□□ -0.4
LINC01393-202ENST00000435981 NBPF26B4DH59 902 aa12.52□□□□□ -0.41
LINC01393-202ENST00000435981 MTRQ99707 1265 aa12.52□□□□□ -0.41
LINC01393-202ENST00000435981 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
LINC01393-202ENST00000435981 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms