RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 E9PSI1 815 aa27.86■■■□□ 2.05
TOP2B-204ENST00000435706 GOLGA6L1Q8N7Z2 621 aa27.85■■■□□ 2.05
TOP2B-204ENST00000435706 COG6Q9Y2V7 657 aa27.85■■■□□ 2.05
TOP2B-204ENST00000435706 PANK3Q9H999 370 aa27.85■■■□□ 2.05
TOP2B-204ENST00000435706 FAM43AQ8N2R8 423 aa27.85■■■□□ 2.05
TOP2B-204ENST00000435706 LMOD2Q6P5Q4 547 aa27.84■■■□□ 2.05
TOP2B-204ENST00000435706 STK26Q9P289 416 aa27.83■■■□□ 2.05
TOP2B-204ENST00000435706 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.83■■■□□ 2.05
TOP2B-204ENST00000435706 BCL2L13Q9BXK5 485 aa27.82■■■□□ 2.04
TOP2B-204ENST00000435706 ANO8Q9HCE9 1232 aaPredicted RBP27.82■■■□□ 2.04
TOP2B-204ENST00000435706 RRP7AQ9Y3A4 280 aaKnown RBP27.82■■■□□ 2.04
TOP2B-204ENST00000435706 USP47Q96K76 1375 aa27.79■■■□□ 2.04
TOP2B-204ENST00000435706 ZKSCAN2Q63HK3 967 aa27.79■■■□□ 2.04
TOP2B-204ENST00000435706 STK31Q9BXU1 1019 aa27.79■■■□□ 2.04
TOP2B-204ENST00000435706 HSP90B1P14625 803 aaKnown RBP27.79■■■□□ 2.04
TOP2B-204ENST00000435706 ANKRD45Q5TZF3 282 aa27.79■■■□□ 2.04
TOP2B-204ENST00000435706 FHOD3Q2V2M9 1422 aa27.79■■■□□ 2.04
TOP2B-204ENST00000435706 KIF16BQ96L93 1317 aa27.78■■■□□ 2.04
TOP2B-204ENST00000435706 BRPF3Q9ULD4 1205 aa27.77■■■□□ 2.04
TOP2B-204ENST00000435706 ZNF771Q7L3S4 317 aaPredicted RBP27.77■■■□□ 2.04
TOP2B-204ENST00000435706 IL27Q8NEV9 243 aa27.77■■■□□ 2.04
TOP2B-204ENST00000435706 GPATCH3Q96I76 525 aa27.76■■■□□ 2.03
TOP2B-204ENST00000435706 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.03
TOP2B-204ENST00000435706 SLC4A10Q6U841 1118 aa27.74■■■□□ 2.03
TOP2B-204ENST00000435706 MRE11P49959 708 aa27.72■■■□□ 2.03
TOP2B-204ENST00000435706 ATP6V1DQ9Y5K8 247 aa27.72■■■□□ 2.03
TOP2B-204ENST00000435706 FOXD4L6Q3SYB3 417 aaPredicted RBP27.71■■■□□ 2.03
TOP2B-204ENST00000435706 FOXD4L3Q6VB84 417 aaPredicted RBP27.71■■■□□ 2.03
TOP2B-204ENST00000435706 SPAG9O60271 1321 aaKnown RBP27.7■■■□□ 2.03
TOP2B-204ENST00000435706 PAK3O75914 559 aaPredicted RBP27.7■■■□□ 2.03
TOP2B-204ENST00000435706 CNTLNQ9NXG0 1405 aa27.7■■■□□ 2.02
TOP2B-204ENST00000435706 CCDC7Q96M83 1385 aa27.69■■■□□ 2.02
TOP2B-204ENST00000435706 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
TOP2B-204ENST00000435706 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
TOP2B-204ENST00000435706 APAF1O14727 1248 aa27.68■■■□□ 2.02
TOP2B-204ENST00000435706 LMOD3Q0VAK6 560 aa27.68■■■□□ 2.02
TOP2B-204ENST00000435706 NOC3LQ8WTT2 800 aaKnown RBP27.68■■■□□ 2.02
TOP2B-204ENST00000435706 CCDC34Q96HJ3 373 aa27.67■■■□□ 2.02
TOP2B-204ENST00000435706 WIZO95785 1651 aa27.67■■■□□ 2.02
TOP2B-204ENST00000435706 TERF2IPQ9NYB0 399 aa27.67■■■□□ 2.02
TOP2B-204ENST00000435706 GOLGA6L19H0YKK7 550 aa27.66■■■□□ 2.02
TOP2B-204ENST00000435706 GGT6Q6P531 493 aa27.64■■■□□ 2.01
TOP2B-204ENST00000435706 DDX19BQ9UMR2 479 aa27.63■■■□□ 2.01
TOP2B-204ENST00000435706 CHMP4AQ9BY43 222 aa27.63■■■□□ 2.01
TOP2B-204ENST00000435706 KIF7Q2M1P5 1343 aa27.63■■■□□ 2.01
TOP2B-204ENST00000435706 RILPL2Q969X0 211 aa27.62■■■□□ 2.01
TOP2B-204ENST00000435706 C22orf23Q9BZE7 217 aa27.62■■■□□ 2.01
TOP2B-204ENST00000435706 ZNF592Q92610 1267 aa27.62■■■□□ 2.01
TOP2B-204ENST00000435706 KIF3AQ9Y496 699 aa27.62■■■□□ 2.01
TOP2B-204ENST00000435706 HDAC5Q9UQL6 1122 aa27.61■■■□□ 2.01
TOP2B-204ENST00000435706 BECN2A8MW95 431 aa27.61■■■□□ 2.01
TOP2B-204ENST00000435706 HDGFP51858 240 aaKnown RBP27.61■■■□□ 2.01
TOP2B-204ENST00000435706 FRAT2O75474 233 aaPredicted RBP27.6■■■□□ 2.01
TOP2B-204ENST00000435706 SF3A1Q15459 793 aaKnown RBP27.6■■■□□ 2.01
TOP2B-204ENST00000435706 TPM3P06753 285 aa27.6■■■□□ 2.01
TOP2B-204ENST00000435706 R3HCC1Q9Y3T6 440 aaKnown RBP27.6■■■□□ 2.01
TOP2B-204ENST00000435706 REC8O95072 547 aa27.59■■■□□ 2.01
TOP2B-204ENST00000435706 NUCB2P80303 420 aa27.59■■■□□ 2.01
TOP2B-204ENST00000435706 MAP7D2Q96T17 732 aa27.59■■■□□ 2.01
TOP2B-204ENST00000435706 DZIP1LQ8IYY4 767 aaKnown RBP27.58■■■□□ 2.01
TOP2B-204ENST00000435706 PKNOX2Q96KN3 472 aa27.58■■■□□ 2.01
TOP2B-204ENST00000435706 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2.01
TOP2B-204ENST00000435706 HNRNPMP52272 730 aaKnown RBP eCLIP27.58■■■□□ 2.013e-7■■■■■ 33.3
TOP2B-204ENST00000435706 NGEFQ8N5V2 710 aa27.58■■■□□ 2.01
TOP2B-204ENST00000435706 NASPP49321 788 aaPredicted RBP27.57■■■□□ 2
TOP2B-204ENST00000435706 MCTP1Q6DN14 999 aa27.57■■■□□ 2
TOP2B-204ENST00000435706 TPM2P07951 284 aa27.57■■■□□ 2
TOP2B-204ENST00000435706 H3BQV1 296 aa27.56■■■□□ 2
TOP2B-204ENST00000435706 IFFO2Q5TF58 517 aa27.56■■■□□ 2
TOP2B-204ENST00000435706 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
TOP2B-204ENST00000435706 ELL2O00472 640 aaPredicted RBP27.56■■■□□ 2
TOP2B-204ENST00000435706 TRAK2O60296 914 aa27.56■■■□□ 2
TOP2B-204ENST00000435706 MTERF4Q7Z6M4 381 aaKnown RBP27.56■■■□□ 2
TOP2B-204ENST00000435706 NPHP1O15259 732 aa27.55■■■□□ 2
TOP2B-204ENST00000435706 CCAR2Q8N163 923 aaKnown RBP27.54■■■□□ 2
TOP2B-204ENST00000435706 GPS2Q13227 327 aa27.54■■■□□ 2
TOP2B-204ENST00000435706 WASHC2AQ641Q2 1341 aa27.54■■■□□ 2
TOP2B-204ENST00000435706 A0A0U1RQG5 324 aaPredicted RBP27.52■■■□□ 2
TOP2B-204ENST00000435706 SETQ01105 290 aaPredicted RBP27.52■■■□□ 2
TOP2B-204ENST00000435706 CREBRFQ8IUR6 639 aa27.51■■□□□ 1.99
TOP2B-204ENST00000435706 GORABQ5T7V8 394 aa27.51■■□□□ 1.99
TOP2B-204ENST00000435706 CCDC39Q9UFE4 941 aa27.5■■□□□ 1.99
TOP2B-204ENST00000435706 EFCAB2Q5VUJ9 269 aa27.5■■□□□ 1.99
TOP2B-204ENST00000435706 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
TOP2B-204ENST00000435706 FAM184AQ8NB25 1140 aa27.49■■□□□ 1.99
TOP2B-204ENST00000435706 AAMPQ13685 434 aa27.49■■□□□ 1.99
TOP2B-204ENST00000435706 TEX35Q5T0J7 233 aa27.49■■□□□ 1.99
TOP2B-204ENST00000435706 RSPH4AQ5TD94 716 aa27.48■■□□□ 1.99
TOP2B-204ENST00000435706 BACH2Q9BYV9 841 aa27.47■■□□□ 1.99
TOP2B-204ENST00000435706 TRAK1Q9UPV9 953 aa27.47■■□□□ 1.99
TOP2B-204ENST00000435706 CLSTN1O94985 981 aa27.47■■□□□ 1.99
TOP2B-204ENST00000435706 BRD4O60885 1362 aaPredicted RBP27.46■■□□□ 1.99
TOP2B-204ENST00000435706 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
TOP2B-204ENST00000435706 PANK1Q8TE04 598 aa27.45■■□□□ 1.99
TOP2B-204ENST00000435706 CHMP3Q9Y3E7 222 aa27.45■■□□□ 1.99
TOP2B-204ENST00000435706 PRKCSHP14314 528 aaPredicted RBP27.45■■□□□ 1.99
TOP2B-204ENST00000435706 KIF3BO15066 747 aa27.45■■□□□ 1.98
TOP2B-204ENST00000435706 UACAQ9BZF9 1416 aa27.45■■□□□ 1.98
TOP2B-204ENST00000435706 LNPKQ9C0E8 428 aa27.44■■□□□ 1.98
TOP2B-204ENST00000435706 DIAPH3Q9NSV4 1193 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms