RNA–Protein interactions for RNA: ENST00000435564.5

PDE1A-205, Transcript of phosphodiesterase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE1A, Length 4,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-205ENST00000435564 RBM19Q9Y4C8 960 aaKnown RBP4.82□□□□□ -1.64
PDE1A-205ENST00000435564 C14orf37Q86TY3 774 aa4.82□□□□□ -1.64
PDE1A-205ENST00000435564 FAM43AQ8N2R8 423 aa4.82□□□□□ -1.64
PDE1A-205ENST00000435564 KIAA0754O94854 1291 aa4.82□□□□□ -1.64
PDE1A-205ENST00000435564 PPEF1O14829 653 aaPredicted RBP4.81□□□□□ -1.64
PDE1A-205ENST00000435564 RNF20Q5VTR2 975 aa4.81□□□□□ -1.64
PDE1A-205ENST00000435564 SPATA24Q86W54 205 aa4.81□□□□□ -1.64
PDE1A-205ENST00000435564 LAMC3Q9Y6N6 1575 aa4.81□□□□□ -1.64
PDE1A-205ENST00000435564 CSRNP3Q8WYN3 585 aa4.81□□□□□ -1.64
PDE1A-205ENST00000435564 TMCO5BA8MYB1 307 aa4.81□□□□□ -1.64
PDE1A-205ENST00000435564 KCNJ4P48050 445 aa4.81□□□□□ -1.64
PDE1A-205ENST00000435564 CTR9Q6PD62 1173 aa4.81□□□□□ -1.64
PDE1A-205ENST00000435564 HDAC5Q9UQL6 1122 aa4.81□□□□□ -1.64
PDE1A-205ENST00000435564 GOLGA6L19H0YKK7 550 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 NF2P35240 595 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 CALCOCO1Q9P1Z2 691 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 ZCCHC6Q5VYS8 1495 aaKnown RBP4.8□□□□□ -1.64
PDE1A-205ENST00000435564 ARID3CA6NKF2 412 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 EIF4G2P78344 907 aaKnown RBP eCLIP4.8□□□□□ -1.64
PDE1A-205ENST00000435564 RABEP1Q15276 862 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 CCDC9Q9Y3X0 531 aaKnown RBP4.8□□□□□ -1.64
PDE1A-205ENST00000435564 GOLGA6L10A0A0M3HER8 536 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 DDX10Q13206 875 aaKnown RBP4.8□□□□□ -1.64
PDE1A-205ENST00000435564 GNL2Q13823 731 aaKnown RBP4.8□□□□□ -1.64
PDE1A-205ENST00000435564 ANKRD18AQ8IVF6 992 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 ANKRD20A12PQ8NF67 263 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 CCDC173Q0VFZ6 552 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 TAF7LQ5H9L4 462 aa4.8□□□□□ -1.64
PDE1A-205ENST00000435564 ZNF772Q68DY9 489 aaPredicted RBP4.8□□□□□ -1.64
PDE1A-205ENST00000435564 SEPT11Q9NVA2 429 aaKnown RBP4.8□□□□□ -1.64
PDE1A-205ENST00000435564 SUPT16HQ9Y5B9 1047 aaKnown RBP4.8□□□□□ -1.64
PDE1A-205ENST00000435564 CCER2I3L3R5 266 aa4.79□□□□□ -1.64
PDE1A-205ENST00000435564 DDX11Q96FC9 970 aa4.79□□□□□ -1.64
PDE1A-205ENST00000435564 TEX14Q8IWB6 1497 aa4.79□□□□□ -1.64
PDE1A-205ENST00000435564 FANCIQ9NVI1 1328 aa4.79□□□□□ -1.64
PDE1A-205ENST00000435564 GIGYF1O75420 1035 aaPredicted RBP4.79□□□□□ -1.64
PDE1A-205ENST00000435564 EIF3JO75822 258 aaKnown RBP4.79□□□□□ -1.64
PDE1A-205ENST00000435564 SF3B2Q13435 895 aaKnown RBP4.79□□□□□ -1.64
PDE1A-205ENST00000435564 HSP90AB3PQ58FF7 597 aa4.79□□□□□ -1.64
PDE1A-205ENST00000435564 KIAA1211Q6ZU35 1233 aa4.79□□□□□ -1.64
PDE1A-205ENST00000435564 CCDC39Q9UFE4 941 aa4.79□□□□□ -1.64
PDE1A-205ENST00000435564 THOC2Q8NI27 1593 aaKnown RBP4.78□□□□□ -1.64
PDE1A-205ENST00000435564 CFAP57Q96MR6 1250 aa4.78□□□□□ -1.64
PDE1A-205ENST00000435564 FAM13BQ9NYF5 915 aa4.78□□□□□ -1.64
PDE1A-205ENST00000435564 KIAA1328Q86T90 577 aa4.78□□□□□ -1.64
PDE1A-205ENST00000435564 EZRP15311 586 aaKnown RBP4.78□□□□□ -1.64
PDE1A-205ENST00000435564 LMOD2Q6P5Q4 547 aa4.78□□□□□ -1.64
PDE1A-205ENST00000435564 FAM114A1Q8IWE2 563 aa4.78□□□□□ -1.64
PDE1A-205ENST00000435564 TXLNBQ8N3L3 684 aa4.78□□□□□ -1.64
PDE1A-205ENST00000435564 UBE2Q2Q8WVN8 375 aa4.78□□□□□ -1.64
PDE1A-205ENST00000435564 ANO8Q9HCE9 1232 aaPredicted RBP4.78□□□□□ -1.64
PDE1A-205ENST00000435564 NUDCQ9Y266 331 aa4.78□□□□□ -1.64
PDE1A-205ENST00000435564 ERLIN1O75477 346 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 HOOK1Q9UJC3 728 aaKnown RBP4.77□□□□□ -1.65
PDE1A-205ENST00000435564 POGZQ7Z3K3 1410 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 HMGB3O15347 200 aaKnown RBP4.77□□□□□ -1.65
PDE1A-205ENST00000435564 MRE11P49959 708 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 PMFBP1Q8TBY8 1022 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 CCDC47Q96A33 483 aaKnown RBP4.77□□□□□ -1.65
PDE1A-205ENST00000435564 FEZ1Q99689 392 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 CLGNO14967 610 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 U2SURPO15042 1029 aaKnown RBP4.77□□□□□ -1.65
PDE1A-205ENST00000435564 ST18O60284 1047 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 PRM3Q9NNZ6 103 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.77□□□□□ -1.65
PDE1A-205ENST00000435564 TIMELESSQ9UNS1 1208 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 LOC105371045A0A1W2PR82 267 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 BECN2A8MW95 431 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 RWDD1Q9H446 243 aaPredicted RBP4.77□□□□□ -1.65
PDE1A-205ENST00000435564 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.77□□□□□ -1.65
PDE1A-205ENST00000435564 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
PDE1A-205ENST00000435564 V9GYY5 206 aaPredicted RBP4.77□□□□□ -1.65
PDE1A-205ENST00000435564 IPO8O15397 1037 aaKnown RBP4.76□□□□□ -1.65
PDE1A-205ENST00000435564 LETM1O95202 739 aaPredicted RBP4.76□□□□□ -1.65
PDE1A-205ENST00000435564 SH3BGRP55822 239 aaPredicted RBP4.76□□□□□ -1.65
PDE1A-205ENST00000435564 WDR66Q8TBY9 1149 aa4.76□□□□□ -1.65
PDE1A-205ENST00000435564 FAM69CQ0P6D2 419 aa4.76□□□□□ -1.65
PDE1A-205ENST00000435564 MICALCLQ6ZW33 695 aa4.76□□□□□ -1.65
PDE1A-205ENST00000435564 DNAJC2Q99543 621 aaKnown RBP4.76□□□□□ -1.65
PDE1A-205ENST00000435564 ERLIN2O94905 339 aa4.76□□□□□ -1.65
PDE1A-205ENST00000435564 IRX3P78415 501 aaPredicted RBP4.76□□□□□ -1.65
PDE1A-205ENST00000435564 TTLL5Q6EMB2 1281 aa4.76□□□□□ -1.65
PDE1A-205ENST00000435564 PCF11O94913 1555 aaKnown RBP4.76□□□□□ -1.65
PDE1A-205ENST00000435564 SEPT6Q14141 434 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 GBP3Q9H0R5 595 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 PPM1EQ8WY54 764 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 NAP1L2Q9ULW6 460 aaPredicted RBP4.75□□□□□ -1.65
PDE1A-205ENST00000435564 PTPRKQ15262 1439 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 ARID3AQ99856 593 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 STK31Q9BXU1 1019 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 TMX4Q9H1E5 349 aaPredicted RBP4.75□□□□□ -1.65
PDE1A-205ENST00000435564 SHTN1A0MZ66 631 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 RALBP1Q15311 655 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 MIER1Q8N108 512 aa4.75□□□□□ -1.65
PDE1A-205ENST00000435564 KIF2AO00139 706 aaPredicted RBP4.74□□□□□ -1.65
PDE1A-205ENST00000435564 CCDC175P0C221 793 aa4.74□□□□□ -1.65
PDE1A-205ENST00000435564 RGS3P49796 1198 aa4.74□□□□□ -1.65
PDE1A-205ENST00000435564 GOLGA6L9A6NEM1 432 aa4.74□□□□□ -1.65
PDE1A-205ENST00000435564 MAPK8IP3Q9UPT6 1336 aa4.74□□□□□ -1.65
PDE1A-205ENST00000435564 KIF3BO15066 747 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms