RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 TSPY4P0CV99 314 aa22.68■■□□□ 1.22
LINC01006-204ENST00000435354 TSPY10P0CW01 314 aa22.68■■□□□ 1.22
LINC01006-204ENST00000435354 FAM135AQ9P2D6 1515 aa22.67■■□□□ 1.22
LINC01006-204ENST00000435354 PZPP20742 1482 aa22.63■■□□□ 1.21
LINC01006-204ENST00000435354 PLA2R1Q13018 1463 aa22.63■■□□□ 1.21
LINC01006-204ENST00000435354 LTBP4Q8N2S1 1624 aa22.63■■□□□ 1.21
LINC01006-204ENST00000435354 RNF17Q9BXT8 1623 aaKnown RBP22.63■■□□□ 1.21
LINC01006-204ENST00000435354 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
LINC01006-204ENST00000435354 FBXO31Q5XUX0 539 aaPredicted RBP22.62■■□□□ 1.21
LINC01006-204ENST00000435354 A2ML1A8K2U0 1454 aa22.61■■□□□ 1.21
LINC01006-204ENST00000435354 TCOF1Q13428 1488 aaKnown RBP22.6■■□□□ 1.21
LINC01006-204ENST00000435354 WASHC2CQ9Y4E1 1318 aa22.6■■□□□ 1.21
LINC01006-204ENST00000435354 DNMT1P26358 1616 aaKnown RBP22.6■■□□□ 1.21
LINC01006-204ENST00000435354 EIF2AK4Q9P2K8 1649 aaKnown RBP22.59■■□□□ 1.21
LINC01006-204ENST00000435354 TNRQ92752 1358 aa22.59■■□□□ 1.21
LINC01006-204ENST00000435354 PTPN23Q9H3S7 1636 aa22.57■■□□□ 1.2
LINC01006-204ENST00000435354 APLP2Q06481 763 aa22.57■■□□□ 1.2
LINC01006-204ENST00000435354 CROCC2H7BZ55 1655 aa22.57■■□□□ 1.2
LINC01006-204ENST00000435354 MROH1Q8NDA8 1641 aa22.57■■□□□ 1.2
LINC01006-204ENST00000435354 PKD2Q13563 968 aa22.56■■□□□ 1.2
LINC01006-204ENST00000435354 ABCC3O15438 1527 aa22.56■■□□□ 1.2
LINC01006-204ENST00000435354 ABCC5O15440 1437 aa22.56■■□□□ 1.2
LINC01006-204ENST00000435354 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
LINC01006-204ENST00000435354 DUOX2Q9NRD8 1548 aa22.54■■□□□ 1.2
LINC01006-204ENST00000435354 ZC3H13Q5T200 1668 aaKnown RBP22.54■■□□□ 1.2
LINC01006-204ENST00000435354 FGD6Q6ZV73 1430 aa22.53■■□□□ 1.2
LINC01006-204ENST00000435354 ZNF335Q9H4Z2 1342 aaPredicted RBP22.51■■□□□ 1.19
LINC01006-204ENST00000435354 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
LINC01006-204ENST00000435354 DAPK1P53355 1430 aa22.49■■□□□ 1.19
LINC01006-204ENST00000435354 IQSEC2Q5JU85 1478 aa22.49■■□□□ 1.19
LINC01006-204ENST00000435354 NLRP1Q9C000 1473 aa22.49■■□□□ 1.19
LINC01006-204ENST00000435354 CEP152O94986 1710 aa22.49■■□□□ 1.19
LINC01006-204ENST00000435354 POLR1AO95602 1720 aaPredicted RBP22.49■■□□□ 1.19
LINC01006-204ENST00000435354 NEURL4Q96JN8 1562 aa22.49■■□□□ 1.19
LINC01006-204ENST00000435354 SPATA31D1Q6ZQQ2 1576 aa22.47■■□□□ 1.19
LINC01006-204ENST00000435354 RRP7BPQ9NSQ0 103 aa22.46■■□□□ 1.19
LINC01006-204ENST00000435354 ERBINQ96RT1 1412 aa22.46■■□□□ 1.19
LINC01006-204ENST00000435354 PRDM15P57071 1507 aaPredicted RBP22.46■■□□□ 1.19
LINC01006-204ENST00000435354 ERVK-7P63135 1459 aa22.45■■□□□ 1.18
LINC01006-204ENST00000435354 UGGT1Q9NYU2 1555 aa22.45■■□□□ 1.18
LINC01006-204ENST00000435354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.43■■□□□ 1.18
LINC01006-204ENST00000435354 CFAP65Q6ZU64 1925 aaKnown RBP22.43■■□□□ 1.18
LINC01006-204ENST00000435354 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
LINC01006-204ENST00000435354 THEMISQ8N1K5 641 aaPredicted RBP22.41■■□□□ 1.18
LINC01006-204ENST00000435354 ANKLE2Q86XL3 938 aa22.38■■□□□ 1.17
LINC01006-204ENST00000435354 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
LINC01006-204ENST00000435354 ARHGAP31Q2M1Z3 1444 aa22.38■■□□□ 1.17
LINC01006-204ENST00000435354 ANKRD30AQ9BXX3 1397 aa22.38■■□□□ 1.17
LINC01006-204ENST00000435354 MED14O60244 1454 aa22.36■■□□□ 1.17
LINC01006-204ENST00000435354 UBR1Q8IWV7 1749 aa22.35■■□□□ 1.17
LINC01006-204ENST00000435354 NPHP4O75161 1426 aaPredicted RBP22.34■■□□□ 1.17
LINC01006-204ENST00000435354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.34■■□□□ 1.17
LINC01006-204ENST00000435354 ADGRL2O95490 1459 aa22.34■■□□□ 1.17
LINC01006-204ENST00000435354 VWDEQ8N2E2 1590 aa22.33■■□□□ 1.17
LINC01006-204ENST00000435354 IQGAP1P46940 1657 aa22.33■■□□□ 1.16
LINC01006-204ENST00000435354 FAM50AQ14320 339 aaKnown RBP22.31■■□□□ 1.16
LINC01006-204ENST00000435354 LMTK2Q8IWU2 1503 aa22.31■■□□□ 1.16
LINC01006-204ENST00000435354 CPS1P31327 1500 aa22.3■■□□□ 1.16
LINC01006-204ENST00000435354 KANK1Q14678 1352 aa22.29■■□□□ 1.16
LINC01006-204ENST00000435354 UBAP1LF5GYI3 381 aa22.29■■□□□ 1.16
LINC01006-204ENST00000435354 PIK3C2BO00750 1634 aa22.26■■□□□ 1.15
LINC01006-204ENST00000435354 ARHGAP23Q9P227 1491 aa22.26■■□□□ 1.15
LINC01006-204ENST00000435354 SLIT1O75093 1534 aa22.25■■□□□ 1.15
LINC01006-204ENST00000435354 SCAF11Q99590 1463 aaKnown RBP22.24■■□□□ 1.15
LINC01006-204ENST00000435354 EFCAB6Q5THR3 1501 aa22.24■■□□□ 1.15
LINC01006-204ENST00000435354 STRCP1A6NGW2 1772 aa22.24■■□□□ 1.15
LINC01006-204ENST00000435354 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
LINC01006-204ENST00000435354 SYNMO15061 1565 aa22.23■■□□□ 1.15
LINC01006-204ENST00000435354 LTKP29376 864 aa22.21■■□□□ 1.15
LINC01006-204ENST00000435354 NOS1P29475 1434 aa22.2■■□□□ 1.14
LINC01006-204ENST00000435354 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.14
LINC01006-204ENST00000435354 IDI1Q13907 227 aa22.18■■□□□ 1.14
LINC01006-204ENST00000435354 TXNDC2Q86VQ3 553 aa22.18■■□□□ 1.14
LINC01006-204ENST00000435354 DISP3Q9P2K9 1392 aa22.17■■□□□ 1.14
LINC01006-204ENST00000435354 TMEM2Q9UHN6 1383 aa22.17■■□□□ 1.14
LINC01006-204ENST00000435354 ALKQ9UM73 1620 aa22.17■■□□□ 1.14
LINC01006-204ENST00000435354 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
LINC01006-204ENST00000435354 UNC13BO14795 1591 aa22.15■■□□□ 1.14
LINC01006-204ENST00000435354 TET3O43151 1660 aa22.14■■□□□ 1.14
LINC01006-204ENST00000435354 RPRD2Q5VT52 1461 aaKnown RBP22.14■■□□□ 1.13
LINC01006-204ENST00000435354 ROCK1Q13464 1354 aa22.13■■□□□ 1.13
LINC01006-204ENST00000435354 ADGRB3O60242 1522 aa22.13■■□□□ 1.13
LINC01006-204ENST00000435354 TOM1O60784 492 aa22.12■■□□□ 1.13
LINC01006-204ENST00000435354 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
LINC01006-204ENST00000435354 STAG3Q9UJ98 1225 aa22.12■■□□□ 1.13
LINC01006-204ENST00000435354 EID1Q9Y6B2 187 aa22.12■■□□□ 1.13
LINC01006-204ENST00000435354 PIP4K2BP78356 416 aa22.11■■□□□ 1.13
LINC01006-204ENST00000435354 GCC2Q8IWJ2 1684 aa22.11■■□□□ 1.13
LINC01006-204ENST00000435354 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
LINC01006-204ENST00000435354 ILDR2Q71H61 639 aa22.08■■□□□ 1.13
LINC01006-204ENST00000435354 SLC52A1Q9NWF4 448 aa22.08■■□□□ 1.13
LINC01006-204ENST00000435354 HSPA1LP34931 641 aa22.07■■□□□ 1.12
LINC01006-204ENST00000435354 XIRP1Q702N8 1843 aaKnown RBP22.06■■□□□ 1.12
LINC01006-204ENST00000435354 MYO5BQ9ULV0 1848 aa22.06■■□□□ 1.12
LINC01006-204ENST00000435354 E9PCH4 1651 aa22.06■■□□□ 1.12
LINC01006-204ENST00000435354 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
LINC01006-204ENST00000435354 ITGAEP38570 1179 aa22.04■■□□□ 1.12
LINC01006-204ENST00000435354 TMEM131LA2VDJ0 1609 aa22.02■■□□□ 1.12
LINC01006-204ENST00000435354 ZFYVE9O95405 1425 aa22.02■■□□□ 1.12
LINC01006-204ENST00000435354 SLC26A8Q96RN1 970 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms