RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 FAM135AQ9P2D6 1515 aa35.4■■■■□ 3.26
HMG20B-205ENST00000435022 PLA2R1Q13018 1463 aa35.39■■■■□ 3.26
HMG20B-205ENST00000435022 NCKAP5LQ9HCH0 1330 aa35.37■■■■□ 3.25
HMG20B-205ENST00000435022 TCOF1Q13428 1488 aaKnown RBP35.37■■■■□ 3.25
HMG20B-205ENST00000435022 MIA2Q96PC5 1412 aa35.37■■■■□ 3.25
HMG20B-205ENST00000435022 PZPP20742 1482 aa35.35■■■■□ 3.25
HMG20B-205ENST00000435022 DNMT1P26358 1616 aaKnown RBP35.35■■■■□ 3.25
HMG20B-205ENST00000435022 RNF17Q9BXT8 1623 aaKnown RBP35.35■■■■□ 3.25
HMG20B-205ENST00000435022 A2ML1A8K2U0 1454 aa35.35■■■■□ 3.25
HMG20B-205ENST00000435022 FBXO31Q5XUX0 539 aaPredicted RBP35.34■■■■□ 3.25
HMG20B-205ENST00000435022 TSPY4P0CV99 314 aa35.32■■■■□ 3.24
HMG20B-205ENST00000435022 TSPY10P0CW01 314 aa35.32■■■■□ 3.24
HMG20B-205ENST00000435022 MROH1Q8NDA8 1641 aa35.3■■■■□ 3.24
HMG20B-205ENST00000435022 TNRQ92752 1358 aa35.28■■■■□ 3.24
HMG20B-205ENST00000435022 EIF2AK4Q9P2K8 1649 aaKnown RBP35.27■■■■□ 3.24
HMG20B-205ENST00000435022 WASHC2CQ9Y4E1 1318 aa35.26■■■■□ 3.23
HMG20B-205ENST00000435022 CROCC2H7BZ55 1655 aa35.24■■■■□ 3.23
HMG20B-205ENST00000435022 ABCC3O15438 1527 aa35.24■■■■□ 3.23
HMG20B-205ENST00000435022 PTPN23Q9H3S7 1636 aa35.22■■■■□ 3.23
HMG20B-205ENST00000435022 PKD2Q13563 968 aa35.22■■■■□ 3.23
HMG20B-205ENST00000435022 ZNF335Q9H4Z2 1342 aaPredicted RBP35.22■■■■□ 3.23
HMG20B-205ENST00000435022 NEURL4Q96JN8 1562 aa35.21■■■■□ 3.23
HMG20B-205ENST00000435022 ZC3H13Q5T200 1668 aaKnown RBP35.21■■■■□ 3.23
HMG20B-205ENST00000435022 IQSEC2Q5JU85 1478 aa35.2■■■■□ 3.23
HMG20B-205ENST00000435022 ABCC5O15440 1437 aa35.18■■■■□ 3.22
HMG20B-205ENST00000435022 POLR1AO95602 1720 aaPredicted RBP35.18■■■■□ 3.22
HMG20B-205ENST00000435022 DUOX2Q9NRD8 1548 aa35.16■■■■□ 3.22
HMG20B-205ENST00000435022 CEP152O94986 1710 aa35.16■■■■□ 3.22
HMG20B-205ENST00000435022 SHANK2Q9UPX8 1470 aa35.16■■■■□ 3.22
HMG20B-205ENST00000435022 SPATA31D1Q6ZQQ2 1576 aa35.14■■■■□ 3.22
HMG20B-205ENST00000435022 FGD6Q6ZV73 1430 aa35.13■■■■□ 3.21
HMG20B-205ENST00000435022 NLRP1Q9C000 1473 aa35.12■■■■□ 3.21
HMG20B-205ENST00000435022 DAPK1P53355 1430 aa35.09■■■■□ 3.21
HMG20B-205ENST00000435022 KIF15Q9NS87 1388 aa35.09■■■■□ 3.21
HMG20B-205ENST00000435022 ERVK-7P63135 1459 aa35.09■■■■□ 3.21
HMG20B-205ENST00000435022 PRDM15P57071 1507 aaPredicted RBP35.08■■■■□ 3.21
HMG20B-205ENST00000435022 UGGT1Q9NYU2 1555 aa35.08■■■■□ 3.21
HMG20B-205ENST00000435022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.07■■■■□ 3.23e-6■□□□□ 10.4
HMG20B-205ENST00000435022 APLP2Q06481 763 aa35.05■■■■□ 3.2
HMG20B-205ENST00000435022 ERBINQ96RT1 1412 aa35.03■■■■□ 3.2
HMG20B-205ENST00000435022 DEPDC5O75140 1603 aa35.02■■■■□ 3.2
HMG20B-205ENST00000435022 RRP7BPQ9NSQ0 103 aa35■■■■□ 3.19
HMG20B-205ENST00000435022 MED14O60244 1454 aa34.97■■■■□ 3.19
HMG20B-205ENST00000435022 CFAP65Q6ZU64 1925 aaKnown RBP34.96■■■■□ 3.19
HMG20B-205ENST00000435022 VWDEQ8N2E2 1590 aa34.96■■■■□ 3.19
HMG20B-205ENST00000435022 THEMISQ8N1K5 641 aaPredicted RBP34.95■■■■□ 3.19
HMG20B-205ENST00000435022 UBR1Q8IWV7 1749 aa34.94■■■■□ 3.18
HMG20B-205ENST00000435022 ARHGAP31Q2M1Z3 1444 aa34.93■■■■□ 3.18
HMG20B-205ENST00000435022 ANKLE2Q86XL3 938 aa34.92■■■■□ 3.18
HMG20B-205ENST00000435022 NPHP4O75161 1426 aaPredicted RBP34.91■■■■□ 3.18
HMG20B-205ENST00000435022 IQGAP1P46940 1657 aa34.9■■■■□ 3.18
HMG20B-205ENST00000435022 CHIC2Q9UKJ5 165 aa34.89■■■■□ 3.18
HMG20B-205ENST00000435022 CPS1P31327 1500 aa34.87■■■■□ 3.17
HMG20B-205ENST00000435022 ADGRL2O95490 1459 aa34.86■■■■□ 3.17
HMG20B-205ENST00000435022 ANKRD30AQ9BXX3 1397 aa34.86■■■■□ 3.17
HMG20B-205ENST00000435022 UBAP1LF5GYI3 381 aa34.85■■■■□ 3.17
HMG20B-205ENST00000435022 LMTK2Q8IWU2 1503 aa34.84■■■■□ 3.17
HMG20B-205ENST00000435022 STRCP1A6NGW2 1772 aa34.83■■■■□ 3.17
HMG20B-205ENST00000435022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.82■■■■□ 3.167e-7■■□□□ 13.5
HMG20B-205ENST00000435022 ARHGAP23Q9P227 1491 aa34.8■■■■□ 3.16
HMG20B-205ENST00000435022 PIK3C2BO00750 1634 aa34.79■■■■□ 3.16
HMG20B-205ENST00000435022 SLIT1O75093 1534 aa34.78■■■■□ 3.16
HMG20B-205ENST00000435022 ALKQ9UM73 1620 aa34.76■■■■□ 3.15
HMG20B-205ENST00000435022 DISP3Q9P2K9 1392 aa34.75■■■■□ 3.15
HMG20B-205ENST00000435022 SYNMO15061 1565 aa34.75■■■■□ 3.15
HMG20B-205ENST00000435022 SCAF11Q99590 1463 aaKnown RBP34.75■■■■□ 3.15
HMG20B-205ENST00000435022 EFCAB6Q5THR3 1501 aa34.74■■■■□ 3.15
HMG20B-205ENST00000435022 KANK1Q14678 1352 aa34.74■■■■□ 3.15
HMG20B-205ENST00000435022 LTKP29376 864 aa34.72■■■■□ 3.15
HMG20B-205ENST00000435022 FAM50AQ14320 339 aaKnown RBP34.72■■■■□ 3.15
HMG20B-205ENST00000435022 ILDR2Q71H61 639 aa34.68■■■■□ 3.14
HMG20B-205ENST00000435022 NOS1P29475 1434 aa34.67■■■■□ 3.14
HMG20B-205ENST00000435022 KDM5AP29375 1690 aaKnown RBP34.66■■■■□ 3.14
HMG20B-205ENST00000435022 LRRC7Q96NW7 1537 aa34.66■■■■□ 3.14
HMG20B-205ENST00000435022 ANKRD50Q9ULJ7 1429 aa34.65■■■■□ 3.14
HMG20B-205ENST00000435022 TMEM2Q9UHN6 1383 aa34.62■■■■□ 3.13
HMG20B-205ENST00000435022 IDI1Q13907 227 aa34.62■■■■□ 3.13
HMG20B-205ENST00000435022 TXNDC2Q86VQ3 553 aa34.61■■■■□ 3.13
HMG20B-205ENST00000435022 PIP4K2BP78356 416 aa34.58■■■■□ 3.13
HMG20B-205ENST00000435022 UNC13BO14795 1591 aa34.57■■■■□ 3.13
HMG20B-205ENST00000435022 ADGRB3O60242 1522 aa34.57■■■■□ 3.12
HMG20B-205ENST00000435022 TET3O43151 1660 aa34.57■■■■□ 3.12
HMG20B-205ENST00000435022 TOM1O60784 492 aa34.56■■■■□ 3.12
HMG20B-205ENST00000435022 HSPA1LP34931 641 aa34.55■■■■□ 3.12
HMG20B-205ENST00000435022 XIRP1Q702N8 1843 aaKnown RBP34.55■■■■□ 3.12
HMG20B-205ENST00000435022 SCAF1Q9H7N4 1312 aaKnown RBP34.54■■■■□ 3.12
HMG20B-205ENST00000435022 RPRD2Q5VT52 1461 aaKnown RBP34.52■■■■□ 3.12
HMG20B-205ENST00000435022 GCC2Q8IWJ2 1684 aa34.5■■■■□ 3.11
HMG20B-205ENST00000435022 EID1Q9Y6B2 187 aa34.49■■■■□ 3.11
HMG20B-205ENST00000435022 ROCK1Q13464 1354 aa34.48■■■■□ 3.11
HMG20B-205ENST00000435022 MYO5BQ9ULV0 1848 aa34.47■■■■□ 3.11
HMG20B-205ENST00000435022 STAG3Q9UJ98 1225 aa34.47■■■■□ 3.11
HMG20B-205ENST00000435022 E9PCH4 1651 aa34.45■■■■□ 3.11
HMG20B-205ENST00000435022 PPARGC1BQ86YN6 1023 aaKnown RBP34.44■■■■□ 3.1
HMG20B-205ENST00000435022 IQGAP3Q86VI3 1631 aa34.42■■■■□ 3.1
HMG20B-205ENST00000435022 SLC52A1Q9NWF4 448 aa34.41■■■■□ 3.1
HMG20B-205ENST00000435022 TMEM131LA2VDJ0 1609 aa34.41■■■■□ 3.1
HMG20B-205ENST00000435022 MED1Q15648 1581 aaPredicted RBP34.4■■■■□ 3.1
HMG20B-205ENST00000435022 ZFYVE9O95405 1425 aa34.4■■■■□ 3.1
HMG20B-205ENST00000435022 SLC26A8Q96RN1 970 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms