RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 EMILIN3Q9NT22 766 aa14.11□□□□□ -0.15
PTPRK-212ENST00000434424 JPH4Q96JJ6 628 aa14.1□□□□□ -0.15
PTPRK-212ENST00000434424 SLC4A5Q9BY07 1137 aa14.1□□□□□ -0.15
PTPRK-212ENST00000434424 LMOD2Q6P5Q4 547 aa14.08□□□□□ -0.16
PTPRK-212ENST00000434424 ADAM33Q9BZ11 813 aa14.08□□□□□ -0.16
PTPRK-212ENST00000434424 BHMG1C9JSJ3 638 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-212ENST00000434424 PTPREP23469 700 aa14.07□□□□□ -0.16
PTPRK-212ENST00000434424 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.07□□□□□ -0.16
PTPRK-212ENST00000434424 KCNV2Q8TDN2 545 aa14.07□□□□□ -0.16
PTPRK-212ENST00000434424 ZBED2Q9BTP6 218 aa14.07□□□□□ -0.16
PTPRK-212ENST00000434424 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
PTPRK-212ENST00000434424 ZDHHC16Q969W1 377 aa14.05□□□□□ -0.16
PTPRK-212ENST00000434424 MAP3K9P80192 1104 aa14.04□□□□□ -0.16
PTPRK-212ENST00000434424 C14orf37Q86TY3 774 aa14.02□□□□□ -0.17
PTPRK-212ENST00000434424 PCDHGA10Q9Y5H3 936 aa14□□□□□ -0.17
PTPRK-212ENST00000434424 PTPN5P54829 565 aa13.98□□□□□ -0.17
PTPRK-212ENST00000434424 THSD4Q6ZMP0 1018 aa13.95□□□□□ -0.18
PTPRK-212ENST00000434424 COL9A1P20849 921 aa13.93□□□□□ -0.18
PTPRK-212ENST00000434424 CAMK2BQ13554 666 aa13.93□□□□□ -0.18
PTPRK-212ENST00000434424 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
PTPRK-212ENST00000434424 PPP1R3GB7ZBB8 358 aa13.91□□□□□ -0.18
PTPRK-212ENST00000434424 BRPF1P55201 1214 aaPredicted RBP13.9□□□□□ -0.18
PTPRK-212ENST00000434424 PROX2Q3B8N5 592 aa13.9□□□□□ -0.18
PTPRK-212ENST00000434424 WNT2BQ93097 391 aa13.9□□□□□ -0.18
PTPRK-212ENST00000434424 PHF14O94880 888 aa13.89□□□□□ -0.19
PTPRK-212ENST00000434424 ARHGEF1Q92888 912 aaKnown RBP13.89□□□□□ -0.19
PTPRK-212ENST00000434424 TYW1BQ6NUM6 668 aa13.88□□□□□ -0.19
PTPRK-212ENST00000434424 NBPF3Q9H094 633 aa13.87□□□□□ -0.19
PTPRK-212ENST00000434424 GOLGA8CPA6NN73 597 aa13.86□□□□□ -0.19
PTPRK-212ENST00000434424 DPYSL4O14531 572 aa13.86□□□□□ -0.19
PTPRK-212ENST00000434424 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
PTPRK-212ENST00000434424 RABGEF1Q9UJ41 708 aa13.85□□□□□ -0.19
PTPRK-212ENST00000434424 HOMEZQ8IX15 550 aa13.84□□□□□ -0.19
PTPRK-212ENST00000434424 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
PTPRK-212ENST00000434424 DAXXQ9UER7 740 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-212ENST00000434424 E2F4Q16254 413 aa13.82□□□□□ -0.2
PTPRK-212ENST00000434424 NEUROD2Q15784 382 aa13.81□□□□□ -0.2
PTPRK-212ENST00000434424 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
PTPRK-212ENST00000434424 C6orf132Q5T0Z8 1188 aa13.8□□□□□ -0.2
PTPRK-212ENST00000434424 EPAS1Q99814 870 aa13.78□□□□□ -0.2
PTPRK-212ENST00000434424 KIAA1468Q9P260 1216 aa13.78□□□□□ -0.2
PTPRK-212ENST00000434424 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
PTPRK-212ENST00000434424 DDX12PQ92771 950 aa13.75□□□□□ -0.21
PTPRK-212ENST00000434424 SLC24A3Q9HC58 644 aa13.75□□□□□ -0.21
PTPRK-212ENST00000434424 SEMA3EO15041 775 aa13.74□□□□□ -0.21
PTPRK-212ENST00000434424 BCAMP50895 628 aa13.74□□□□□ -0.21
PTPRK-212ENST00000434424 ANKK1Q8NFD2 765 aa13.74□□□□□ -0.21
PTPRK-212ENST00000434424 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
PTPRK-212ENST00000434424 LAPTM4BQ86VI4 370 aa13.73□□□□□ -0.21
PTPRK-212ENST00000434424 ONECUT3O60422 494 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-212ENST00000434424 A0A0G2JS52 829 aa13.71□□□□□ -0.21
PTPRK-212ENST00000434424 ZFRQ96KR1 1074 aaKnown RBP13.71□□□□□ -0.21
PTPRK-212ENST00000434424 SEPT9Q9UHD8 586 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-212ENST00000434424 SOWAHBA6NEL2 793 aa13.7□□□□□ -0.22
PTPRK-212ENST00000434424 TRIM6-TRIM34B2RNG4 842 aa13.7□□□□□ -0.22
PTPRK-212ENST00000434424 SMYD5Q6GMV2 418 aa13.7□□□□□ -0.22
PTPRK-212ENST00000434424 PDIA6Q15084 440 aa13.69□□□□□ -0.22
PTPRK-212ENST00000434424 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-212ENST00000434424 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
PTPRK-212ENST00000434424 RGS20O76081 388 aa13.65□□□□□ -0.22
PTPRK-212ENST00000434424 ITGBL1O95965 494 aaPredicted RBP13.65□□□□□ -0.22
PTPRK-212ENST00000434424 ZMYND10O75800 440 aa13.64□□□□□ -0.23
PTPRK-212ENST00000434424 WBP1LQ9NX94 342 aa13.64□□□□□ -0.23
PTPRK-212ENST00000434424 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
PTPRK-212ENST00000434424 TSKSQ9UJT2 592 aa13.63□□□□□ -0.23
PTPRK-212ENST00000434424 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
PTPRK-212ENST00000434424 SPDYE16A6NNV3 312 aaPredicted RBP13.6□□□□□ -0.23
PTPRK-212ENST00000434424 MAP3K7O43318 606 aa13.6□□□□□ -0.23
PTPRK-212ENST00000434424 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
PTPRK-212ENST00000434424 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
PTPRK-212ENST00000434424 ARIH1Q9Y4X5 557 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-212ENST00000434424 FAM198AQ9UFP1 575 aa13.56□□□□□ -0.24
PTPRK-212ENST00000434424 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
PTPRK-212ENST00000434424 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-212ENST00000434424 C3orf80F5H4A9 247 aa13.54□□□□□ -0.24
PTPRK-212ENST00000434424 PACS2Q86VP3 889 aa13.53□□□□□ -0.24
PTPRK-212ENST00000434424 LRCH3Q96II8 777 aa13.53□□□□□ -0.24
PTPRK-212ENST00000434424 TSR3Q9UJK0 312 aaKnown RBP13.53□□□□□ -0.24
PTPRK-212ENST00000434424 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
PTPRK-212ENST00000434424 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
PTPRK-212ENST00000434424 GRXCR2A6NFK2 248 aa13.51□□□□□ -0.25
PTPRK-212ENST00000434424 SMAPO00193 183 aa13.51□□□□□ -0.25
PTPRK-212ENST00000434424 PRSS12P56730 875 aa13.5□□□□□ -0.25
PTPRK-212ENST00000434424 AK7Q96M32 723 aa13.5□□□□□ -0.25
PTPRK-212ENST00000434424 IRX2Q9BZI1 471 aaPredicted RBP13.5□□□□□ -0.25
PTPRK-212ENST00000434424 OSBPP22059 807 aa13.49□□□□□ -0.25
PTPRK-212ENST00000434424 KCNC4Q03721 635 aa13.48□□□□□ -0.25
PTPRK-212ENST00000434424 CDHR5Q9HBB8 845 aa13.47□□□□□ -0.25
PTPRK-212ENST00000434424 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
PTPRK-212ENST00000434424 KRI1Q8N9T8 703 aaKnown RBP13.45□□□□□ -0.26
PTPRK-212ENST00000434424 GPIHBP1Q8IV16 184 aa13.44□□□□□ -0.26
PTPRK-212ENST00000434424 CERKQ8TCT0 537 aa13.44□□□□□ -0.26
PTPRK-212ENST00000434424 TATDN2Q93075 761 aa13.42□□□□□ -0.26
PTPRK-212ENST00000434424 PPP4CP60510 307 aa13.41□□□□□ -0.26
PTPRK-212ENST00000434424 GPBP1L1Q9HC44 474 aaPredicted RBP13.41□□□□□ -0.26
PTPRK-212ENST00000434424 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
PTPRK-212ENST00000434424 PNMA3Q9UL41 463 aa13.4□□□□□ -0.26
PTPRK-212ENST00000434424 TJAP1Q5JTD0 557 aa13.39□□□□□ -0.27
PTPRK-212ENST00000434424 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
PTPRK-212ENST00000434424 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms