RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 KDM5DQ9BY66 1539 aa23.46■■□□□ 1.35
RPUSD3-208ENST00000433972 IQSEC2Q5JU85 1478 aa23.45■■□□□ 1.34
RPUSD3-208ENST00000433972 MIA2Q96PC5 1412 aa23.44■■□□□ 1.34
RPUSD3-208ENST00000433972 WASHC2CQ9Y4E1 1318 aa23.44■■□□□ 1.34
RPUSD3-208ENST00000433972 A2ML1A8K2U0 1454 aa23.42■■□□□ 1.34
RPUSD3-208ENST00000433972 NCKAP5LQ9HCH0 1330 aa23.41■■□□□ 1.34
RPUSD3-208ENST00000433972 APLP2Q06481 763 aa23.41■■□□□ 1.34
RPUSD3-208ENST00000433972 PZPP20742 1482 aa23.41■■□□□ 1.34
RPUSD3-208ENST00000433972 TCOF1Q13428 1488 aaKnown RBP23.4■■□□□ 1.34
RPUSD3-208ENST00000433972 MYOM3Q5VTT5 1437 aa23.4■■□□□ 1.34
RPUSD3-208ENST00000433972 TNRQ92752 1358 aa23.4■■□□□ 1.34
RPUSD3-208ENST00000433972 LTBP4Q8N2S1 1624 aa23.39■■□□□ 1.33
RPUSD3-208ENST00000433972 MAST1Q9Y2H9 1570 aa23.38■■□□□ 1.33
RPUSD3-208ENST00000433972 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
RPUSD3-208ENST00000433972 NLRP1Q9C000 1473 aa23.33■■□□□ 1.33
RPUSD3-208ENST00000433972 DNMT1P26358 1616 aaKnown RBP23.33■■□□□ 1.32
RPUSD3-208ENST00000433972 FBXO31Q5XUX0 539 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-208ENST00000433972 THEMISQ8N1K5 641 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-208ENST00000433972 ZNF335Q9H4Z2 1342 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-208ENST00000433972 EIF2AK4Q9P2K8 1649 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-208ENST00000433972 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-208ENST00000433972 ZC3H13Q5T200 1668 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-208ENST00000433972 ANKLE2Q86XL3 938 aa23.27■■□□□ 1.32
RPUSD3-208ENST00000433972 DUOX2Q9NRD8 1548 aa23.27■■□□□ 1.32
RPUSD3-208ENST00000433972 SHANK2Q9UPX8 1470 aa23.26■■□□□ 1.31
RPUSD3-208ENST00000433972 ABCC3O15438 1527 aa23.25■■□□□ 1.31
RPUSD3-208ENST00000433972 UGGT1Q9NYU2 1555 aa23.24■■□□□ 1.31
RPUSD3-208ENST00000433972 KIF15Q9NS87 1388 aa23.23■■□□□ 1.31
RPUSD3-208ENST00000433972 ERBINQ96RT1 1412 aa23.22■■□□□ 1.31
RPUSD3-208ENST00000433972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.21■■□□□ 1.31
RPUSD3-208ENST00000433972 SPATA31D1Q6ZQQ2 1576 aa23.2■■□□□ 1.3
RPUSD3-208ENST00000433972 UBAP1LF5GYI3 381 aa23.2■■□□□ 1.3
RPUSD3-208ENST00000433972 POLR1AO95602 1720 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-208ENST00000433972 PTPN23Q9H3S7 1636 aa23.19■■□□□ 1.3
RPUSD3-208ENST00000433972 ABCC5O15440 1437 aa23.19■■□□□ 1.3
RPUSD3-208ENST00000433972 CPS1P31327 1500 aa23.18■■□□□ 1.3
RPUSD3-208ENST00000433972 ERVK-7P63135 1459 aa23.18■■□□□ 1.3
RPUSD3-208ENST00000433972 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
RPUSD3-208ENST00000433972 NEURL4Q96JN8 1562 aa23.17■■□□□ 1.3
RPUSD3-208ENST00000433972 DAPK1P53355 1430 aa23.16■■□□□ 1.3
RPUSD3-208ENST00000433972 DISP3Q9P2K9 1392 aa23.16■■□□□ 1.3
RPUSD3-208ENST00000433972 RRP7BPQ9NSQ0 103 aa23.16■■□□□ 1.3
RPUSD3-208ENST00000433972 MED14O60244 1454 aa23.16■■□□□ 1.3
RPUSD3-208ENST00000433972 DEPDC5O75140 1603 aa23.15■■□□□ 1.3
RPUSD3-208ENST00000433972 KANK1Q14678 1352 aa23.15■■□□□ 1.3
RPUSD3-208ENST00000433972 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
RPUSD3-208ENST00000433972 PRDM15P57071 1507 aaPredicted RBP23.15■■□□□ 1.3
RPUSD3-208ENST00000433972 NPHP4O75161 1426 aaPredicted RBP23.15■■□□□ 1.3
RPUSD3-208ENST00000433972 ANKRD30AQ9BXX3 1397 aa23.14■■□□□ 1.3
RPUSD3-208ENST00000433972 CROCC2H7BZ55 1655 aa23.14■■□□□ 1.29
RPUSD3-208ENST00000433972 ARHGAP31Q2M1Z3 1444 aa23.14■■□□□ 1.29
RPUSD3-208ENST00000433972 TOM1O60784 492 aa23.11■■□□□ 1.29
RPUSD3-208ENST00000433972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.07■■□□□ 1.28
RPUSD3-208ENST00000433972 CEP152O94986 1710 aa23.07■■□□□ 1.28
RPUSD3-208ENST00000433972 IQGAP1P46940 1657 aa23.05■■□□□ 1.28
RPUSD3-208ENST00000433972 VWDEQ8N2E2 1590 aa23.05■■□□□ 1.28
RPUSD3-208ENST00000433972 CHIC2Q9UKJ5 165 aa23.04■■□□□ 1.28
RPUSD3-208ENST00000433972 EID1Q9Y6B2 187 aa23.03■■□□□ 1.28
RPUSD3-208ENST00000433972 SCAF11Q99590 1463 aaKnown RBP23.03■■□□□ 1.28
RPUSD3-208ENST00000433972 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
RPUSD3-208ENST00000433972 LMTK2Q8IWU2 1503 aa23.03■■□□□ 1.28
RPUSD3-208ENST00000433972 ADGRL2O95490 1459 aa23.01■■□□□ 1.27
RPUSD3-208ENST00000433972 STAG3Q9UJ98 1225 aa23.01■■□□□ 1.27
RPUSD3-208ENST00000433972 UBR1Q8IWV7 1749 aa23■■□□□ 1.27
RPUSD3-208ENST00000433972 SLIT1O75093 1534 aa23■■□□□ 1.27
RPUSD3-208ENST00000433972 FAM50AQ14320 339 aaKnown RBP23■■□□□ 1.27
RPUSD3-208ENST00000433972 ARHGAP23Q9P227 1491 aa22.99■■□□□ 1.27
RPUSD3-208ENST00000433972 TXNDC2Q86VQ3 553 aa22.99■■□□□ 1.27
RPUSD3-208ENST00000433972 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
RPUSD3-208ENST00000433972 SYNMO15061 1565 aa22.96■■□□□ 1.27
RPUSD3-208ENST00000433972 TMEM2Q9UHN6 1383 aa22.95■■□□□ 1.26
RPUSD3-208ENST00000433972 ANKRD50Q9ULJ7 1429 aa22.93■■□□□ 1.26
RPUSD3-208ENST00000433972 LTKP29376 864 aa22.93■■□□□ 1.26
RPUSD3-208ENST00000433972 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
RPUSD3-208ENST00000433972 ILDR2Q71H61 639 aa22.92■■□□□ 1.26
RPUSD3-208ENST00000433972 SLC52A1Q9NWF4 448 aa22.92■■□□□ 1.26
RPUSD3-208ENST00000433972 KDM5AP29375 1690 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-208ENST00000433972 LRRC7Q96NW7 1537 aa22.92■■□□□ 1.26
RPUSD3-208ENST00000433972 SOCS7O14512 581 aa22.91■■□□□ 1.26
RPUSD3-208ENST00000433972 HSPA1LP34931 641 aa22.91■■□□□ 1.26
RPUSD3-208ENST00000433972 RPRD2Q5VT52 1461 aaKnown RBP22.91■■□□□ 1.26
RPUSD3-208ENST00000433972 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
RPUSD3-208ENST00000433972 IDI1Q13907 227 aa22.9■■□□□ 1.26
RPUSD3-208ENST00000433972 NOS1P29475 1434 aa22.9■■□□□ 1.26
RPUSD3-208ENST00000433972 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
RPUSD3-208ENST00000433972 ADGRB3O60242 1522 aa22.85■■□□□ 1.25
RPUSD3-208ENST00000433972 ROCK1Q13464 1354 aa22.84■■□□□ 1.25
RPUSD3-208ENST00000433972 HDGFP51858 240 aaKnown RBP22.83■■□□□ 1.25
RPUSD3-208ENST00000433972 STRCP1A6NGW2 1772 aa22.81■■□□□ 1.24
RPUSD3-208ENST00000433972 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
RPUSD3-208ENST00000433972 TET3O43151 1660 aa22.78■■□□□ 1.24
RPUSD3-208ENST00000433972 KCNA6P17658 529 aa22.78■■□□□ 1.24
RPUSD3-208ENST00000433972 BCANQ96GW7 911 aa22.77■■□□□ 1.24
RPUSD3-208ENST00000433972 UNC13BO14795 1591 aa22.76■■□□□ 1.23
RPUSD3-208ENST00000433972 MED1Q15648 1581 aaPredicted RBP22.76■■□□□ 1.23
RPUSD3-208ENST00000433972 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
RPUSD3-208ENST00000433972 SLC26A8Q96RN1 970 aa22.74■■□□□ 1.23
RPUSD3-208ENST00000433972 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.73■■□□□ 1.23
RPUSD3-208ENST00000433972 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
RPUSD3-208ENST00000433972 TMEM94Q12767 1356 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms