RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 DHX29Q7Z478 1369 aaKnown RBP23.55■■□□□ 1.36
CTSD-204ENST00000433655 CCDC144AA2RUR9 1427 aa23.54■■□□□ 1.36
CTSD-204ENST00000433655 DCAF11Q8TEB1 546 aa23.52■■□□□ 1.36
CTSD-204ENST00000433655 ABCA9Q8IUA7 1624 aa23.52■■□□□ 1.35
CTSD-204ENST00000433655 ZFYVE16Q7Z3T8 1539 aa23.51■■□□□ 1.35
CTSD-204ENST00000433655 WDR7Q9Y4E6 1490 aa23.51■■□□□ 1.35
CTSD-204ENST00000433655 KDM2AQ9Y2K7 1162 aa23.51■■□□□ 1.35
CTSD-204ENST00000433655 PRAG1Q86YV5 1406 aa23.51■■□□□ 1.35
CTSD-204ENST00000433655 ARID4BQ4LE39 1312 aaPredicted RBP23.51■■□□□ 1.35
CTSD-204ENST00000433655 ATP10AO60312 1499 aa23.51■■□□□ 1.35
CTSD-204ENST00000433655 HNRNPUQ00839 825 aaKnown RBP eCLIP23.5■■□□□ 1.35
CTSD-204ENST00000433655 CARD11Q9BXL7 1154 aa23.5■■□□□ 1.35
CTSD-204ENST00000433655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.35
CTSD-204ENST00000433655 A2MP01023 1474 aa23.5■■□□□ 1.35
CTSD-204ENST00000433655 FKBP8Q14318 412 aa23.47■■□□□ 1.35
CTSD-204ENST00000433655 E9PCH4 1651 aa23.46■■□□□ 1.35
CTSD-204ENST00000433655 RTEL1-TNFRSF6BF6WH68 1400 aa23.46■■□□□ 1.35
CTSD-204ENST00000433655 INO80Q9ULG1 1556 aaPredicted RBP23.45■■□□□ 1.34
CTSD-204ENST00000433655 LAMC1P11047 1609 aa23.45■■□□□ 1.34
CTSD-204ENST00000433655 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
CTSD-204ENST00000433655 ROCK2O75116 1388 aaKnown RBP23.43■■□□□ 1.34
CTSD-204ENST00000433655 MRS2Q9HD23 443 aa23.43■■□□□ 1.34
CTSD-204ENST00000433655 ST20-MTHFSA0A0A6YYL1 179 aa23.42■■□□□ 1.34
CTSD-204ENST00000433655 FANCAO15360 1455 aa23.41■■□□□ 1.34
CTSD-204ENST00000433655 GPRASP1Q5JY77 1395 aa23.41■■□□□ 1.34
CTSD-204ENST00000433655 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
CTSD-204ENST00000433655 AFAP1Q8N556 730 aa23.4■■□□□ 1.34
CTSD-204ENST00000433655 POLR3GLQ9BT43 218 aa23.39■■□□□ 1.34
CTSD-204ENST00000433655 PRDM15P57071 1507 aaPredicted RBP23.39■■□□□ 1.33
CTSD-204ENST00000433655 ATP7AQ04656 1500 aa23.39■■□□□ 1.33
CTSD-204ENST00000433655 EIF2AK4Q9P2K8 1649 aaKnown RBP23.39■■□□□ 1.33
CTSD-204ENST00000433655 RGL3Q3MIN7 710 aa23.38■■□□□ 1.33
CTSD-204ENST00000433655 BCANQ96GW7 911 aa23.38■■□□□ 1.33
CTSD-204ENST00000433655 FAM9BQ8IZU0 186 aa23.36■■□□□ 1.33
CTSD-204ENST00000433655 RNF17Q9BXT8 1623 aaKnown RBP23.36■■□□□ 1.33
CTSD-204ENST00000433655 SPHKAPQ2M3C7 1700 aa23.35■■□□□ 1.33
CTSD-204ENST00000433655 ASXL2Q76L83 1435 aa23.35■■□□□ 1.33
CTSD-204ENST00000433655 NEFLP07196 543 aa23.35■■□□□ 1.33
CTSD-204ENST00000433655 NBPF1Q3BBV0 1214 aa23.35■■□□□ 1.33
CTSD-204ENST00000433655 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
CTSD-204ENST00000433655 TRPM2O94759 1503 aa23.34■■□□□ 1.33
CTSD-204ENST00000433655 TET3O43151 1660 aa23.34■■□□□ 1.33
CTSD-204ENST00000433655 CEP152O94986 1710 aa23.33■■□□□ 1.33
CTSD-204ENST00000433655 ADGRL1O94910 1474 aa23.32■■□□□ 1.32
CTSD-204ENST00000433655 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
CTSD-204ENST00000433655 MROH1Q8NDA8 1641 aa23.3■■□□□ 1.32
CTSD-204ENST00000433655 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
CTSD-204ENST00000433655 MADDQ8WXG6 1647 aa23.3■■□□□ 1.32
CTSD-204ENST00000433655 PTPRTO14522 1441 aa23.29■■□□□ 1.32
CTSD-204ENST00000433655 SCAPERQ9BY12 1400 aa23.28■■□□□ 1.32
CTSD-204ENST00000433655 COL17A1Q9UMD9 1497 aaPredicted RBP23.28■■□□□ 1.32
CTSD-204ENST00000433655 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
CTSD-204ENST00000433655 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
CTSD-204ENST00000433655 TSHZ2Q9NRE2 1034 aa23.24■■□□□ 1.31
CTSD-204ENST00000433655 TESK2Q96S53 571 aa23.23■■□□□ 1.31
CTSD-204ENST00000433655 IQGAP1P46940 1657 aa23.23■■□□□ 1.31
CTSD-204ENST00000433655 DISP3Q9P2K9 1392 aa23.21■■□□□ 1.31
CTSD-204ENST00000433655 KTN1Q86UP2 1357 aaKnown RBP23.2■■□□□ 1.3
CTSD-204ENST00000433655 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
CTSD-204ENST00000433655 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
CTSD-204ENST00000433655 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
CTSD-204ENST00000433655 KANK1Q14678 1352 aa23.17■■□□□ 1.3
CTSD-204ENST00000433655 ZNF518AQ6AHZ1 1483 aa23.16■■□□□ 1.3
CTSD-204ENST00000433655 KIF3BO15066 747 aa23.16■■□□□ 1.3
CTSD-204ENST00000433655 CFAP74Q9C0B2 1584 aa23.16■■□□□ 1.3
CTSD-204ENST00000433655 EFCAB6Q5THR3 1501 aa23.15■■□□□ 1.3
CTSD-204ENST00000433655 MYBBP1AQ9BQG0 1328 aaKnown RBP23.15■■□□□ 1.3
CTSD-204ENST00000433655 PPRC1Q5VV67 1664 aaKnown RBP23.15■■□□□ 1.3
CTSD-204ENST00000433655 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.3
CTSD-204ENST00000433655 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.3
CTSD-204ENST00000433655 RALBP1Q15311 655 aa23.14■■□□□ 1.29
CTSD-204ENST00000433655 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.29
CTSD-204ENST00000433655 PER1O15534 1290 aaPredicted RBP23.13■■□□□ 1.29
CTSD-204ENST00000433655 IRX6P78412 446 aaPredicted RBP23.13■■□□□ 1.29
CTSD-204ENST00000433655 UGGT1Q9NYU2 1555 aa23.13■■□□□ 1.29
CTSD-204ENST00000433655 KIAA1210Q9ULL0 1709 aa23.12■■□□□ 1.29
CTSD-204ENST00000433655 LMTK2Q8IWU2 1503 aa23.11■■□□□ 1.29
CTSD-204ENST00000433655 IFT172Q9UG01 1749 aa23.11■■□□□ 1.29
CTSD-204ENST00000433655 FRMPD1Q5SYB0 1578 aa23.1■■□□□ 1.29
CTSD-204ENST00000433655 POGZQ7Z3K3 1410 aa23.1■■□□□ 1.29
CTSD-204ENST00000433655 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
CTSD-204ENST00000433655 TMC1Q8TDI8 760 aa23.1■■□□□ 1.29
CTSD-204ENST00000433655 CD109Q6YHK3 1445 aa23.09■■□□□ 1.29
CTSD-204ENST00000433655 MROH2AA6NES4 1674 aa23.09■■□□□ 1.29
CTSD-204ENST00000433655 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
CTSD-204ENST00000433655 KIF1BO60333 1816 aa23.08■■□□□ 1.29
CTSD-204ENST00000433655 NPM1P06748 294 aaKnown RBP eCLIP23.07■■□□□ 1.28
CTSD-204ENST00000433655 STAC3Q96MF2 364 aa23.07■■□□□ 1.28
CTSD-204ENST00000433655 HECW2Q9P2P5 1572 aa23.07■■□□□ 1.28
CTSD-204ENST00000433655 MAP3K4Q9Y6R4 1608 aa23.07■■□□□ 1.28
CTSD-204ENST00000433655 TMF1P82094 1093 aa23.06■■□□□ 1.28
CTSD-204ENST00000433655 SCAF11Q99590 1463 aaKnown RBP23.06■■□□□ 1.28
CTSD-204ENST00000433655 ABCA6Q8N139 1617 aa23.06■■□□□ 1.28
CTSD-204ENST00000433655 MLH3Q9UHC1 1453 aa23.05■■□□□ 1.28
CTSD-204ENST00000433655 MYOM2P54296 1465 aa23.05■■□□□ 1.28
CTSD-204ENST00000433655 ERICH6BQ5W0A0 696 aa23.04■■□□□ 1.28
CTSD-204ENST00000433655 WASHC2CQ9Y4E1 1318 aa23.02■■□□□ 1.28
CTSD-204ENST00000433655 PANK3Q9H999 370 aa23.02■■□□□ 1.28
CTSD-204ENST00000433655 MYOM1P52179 1685 aa23.01■■□□□ 1.27
CTSD-204ENST00000433655 NLRP13Q86W25 1043 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms