RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 TSPY10P0CW01 314 aa34.44■■■■□ 3.1
RPUSD3-206ENST00000433535 MIA2Q96PC5 1412 aa34.42■■■■□ 3.1
RPUSD3-206ENST00000433535 FAM135AQ9P2D6 1515 aa34.41■■■■□ 3.1
RPUSD3-206ENST00000433535 PLA2R1Q13018 1463 aa34.37■■■■□ 3.09
RPUSD3-206ENST00000433535 PZPP20742 1482 aa34.36■■■■□ 3.09
RPUSD3-206ENST00000433535 NCKAP5LQ9HCH0 1330 aa34.35■■■■□ 3.09
RPUSD3-206ENST00000433535 LTBP4Q8N2S1 1624 aa34.35■■■■□ 3.09
RPUSD3-206ENST00000433535 RNF17Q9BXT8 1623 aaKnown RBP34.35■■■■□ 3.09
RPUSD3-206ENST00000433535 A2ML1A8K2U0 1454 aa34.34■■■■□ 3.09
RPUSD3-206ENST00000433535 WASHC2CQ9Y4E1 1318 aa34.33■■■■□ 3.09
RPUSD3-206ENST00000433535 FBXO31Q5XUX0 539 aaPredicted RBP34.32■■■■□ 3.08
RPUSD3-206ENST00000433535 DNMT1P26358 1616 aaKnown RBP34.32■■■■□ 3.08
RPUSD3-206ENST00000433535 TCOF1Q13428 1488 aaKnown RBP34.32■■■■□ 3.08
RPUSD3-206ENST00000433535 APLP2Q06481 763 aa34.31■■■■□ 3.08
RPUSD3-206ENST00000433535 TNRQ92752 1358 aa34.31■■■■□ 3.08
RPUSD3-206ENST00000433535 EIF2AK4Q9P2K8 1649 aaKnown RBP34.3■■■■□ 3.08
RPUSD3-206ENST00000433535 CROCC2H7BZ55 1655 aa34.29■■■■□ 3.08
RPUSD3-206ENST00000433535 PTPN23Q9H3S7 1636 aa34.29■■■■□ 3.08
RPUSD3-206ENST00000433535 MROH1Q8NDA8 1641 aa34.26■■■■□ 3.07
RPUSD3-206ENST00000433535 ZC3H13Q5T200 1668 aaKnown RBP34.25■■■■□ 3.07
RPUSD3-206ENST00000433535 ABCC3O15438 1527 aa34.25■■■■□ 3.07
RPUSD3-206ENST00000433535 PKD2Q13563 968 aa34.25■■■■□ 3.07
RPUSD3-206ENST00000433535 DUOX2Q9NRD8 1548 aa34.22■■■■□ 3.07
RPUSD3-206ENST00000433535 SHANK2Q9UPX8 1470 aa34.21■■■■□ 3.07
RPUSD3-206ENST00000433535 ABCC5O15440 1437 aa34.21■■■■□ 3.07
RPUSD3-206ENST00000433535 ZNF335Q9H4Z2 1342 aaPredicted RBP34.2■■■■□ 3.07
RPUSD3-206ENST00000433535 CEP152O94986 1710 aa34.19■■■■□ 3.06
RPUSD3-206ENST00000433535 POLR1AO95602 1720 aaPredicted RBP34.19■■■■□ 3.06
RPUSD3-206ENST00000433535 FGD6Q6ZV73 1430 aa34.19■■■■□ 3.06
RPUSD3-206ENST00000433535 KIF15Q9NS87 1388 aa34.16■■■■□ 3.06
RPUSD3-206ENST00000433535 NLRP1Q9C000 1473 aa34.15■■■■□ 3.06
RPUSD3-206ENST00000433535 DAPK1P53355 1430 aa34.15■■■■□ 3.06
RPUSD3-206ENST00000433535 NEURL4Q96JN8 1562 aa34.15■■■■□ 3.06
RPUSD3-206ENST00000433535 IQSEC2Q5JU85 1478 aa34.14■■■■□ 3.06
RPUSD3-206ENST00000433535 SPATA31D1Q6ZQQ2 1576 aa34.13■■■■□ 3.05
RPUSD3-206ENST00000433535 UGGT1Q9NYU2 1555 aa34.11■■■■□ 3.05
RPUSD3-206ENST00000433535 PRDM15P57071 1507 aaPredicted RBP34.1■■■■□ 3.05
RPUSD3-206ENST00000433535 ERVK-7P63135 1459 aa34.1■■■■□ 3.05
RPUSD3-206ENST00000433535 RRP7BPQ9NSQ0 103 aa34.09■■■■□ 3.05
RPUSD3-206ENST00000433535 ERBINQ96RT1 1412 aa34.09■■■■□ 3.05
RPUSD3-206ENST00000433535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.09■■■■□ 3.05
RPUSD3-206ENST00000433535 CFAP65Q6ZU64 1925 aaKnown RBP34.02■■■■□ 3.04
RPUSD3-206ENST00000433535 DEPDC5O75140 1603 aa34.02■■■■□ 3.04
RPUSD3-206ENST00000433535 THEMISQ8N1K5 641 aaPredicted RBP34.01■■■■□ 3.03
RPUSD3-206ENST00000433535 CHIC2Q9UKJ5 165 aa33.99■■■■□ 3.03
RPUSD3-206ENST00000433535 ANKLE2Q86XL3 938 aa33.98■■■■□ 3.03
RPUSD3-206ENST00000433535 ANKRD30AQ9BXX3 1397 aa33.97■■■■□ 3.03
RPUSD3-206ENST00000433535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.95■■■■□ 3.03
RPUSD3-206ENST00000433535 UBR1Q8IWV7 1749 aa33.94■■■■□ 3.02
RPUSD3-206ENST00000433535 NPHP4O75161 1426 aaPredicted RBP33.94■■■■□ 3.02
RPUSD3-206ENST00000433535 ARHGAP31Q2M1Z3 1444 aa33.93■■■■□ 3.02
RPUSD3-206ENST00000433535 MED14O60244 1454 aa33.93■■■■□ 3.02
RPUSD3-206ENST00000433535 IQGAP1P46940 1657 aa33.93■■■■□ 3.02
RPUSD3-206ENST00000433535 VWDEQ8N2E2 1590 aa33.91■■■■□ 3.02
RPUSD3-206ENST00000433535 FAM50AQ14320 339 aaKnown RBP33.9■■■■□ 3.02
RPUSD3-206ENST00000433535 UBAP1LF5GYI3 381 aa33.89■■■■□ 3.02
RPUSD3-206ENST00000433535 CPS1P31327 1500 aa33.89■■■■□ 3.02
RPUSD3-206ENST00000433535 ADGRL2O95490 1459 aa33.88■■■■□ 3.01
RPUSD3-206ENST00000433535 KANK1Q14678 1352 aa33.88■■■■□ 3.01
RPUSD3-206ENST00000433535 LMTK2Q8IWU2 1503 aa33.84■■■■□ 3.01
RPUSD3-206ENST00000433535 PIK3C2BO00750 1634 aa33.82■■■■□ 3.01
RPUSD3-206ENST00000433535 SCAF11Q99590 1463 aaKnown RBP33.79■■■■□ 3
RPUSD3-206ENST00000433535 EFCAB6Q5THR3 1501 aa33.78■■■■□ 3
RPUSD3-206ENST00000433535 ARHGAP23Q9P227 1491 aa33.77■■■■□ 3
RPUSD3-206ENST00000433535 SLIT1O75093 1534 aa33.77■■■■□ 3
RPUSD3-206ENST00000433535 STRCP1A6NGW2 1772 aa33.77■■■■□ 3
RPUSD3-206ENST00000433535 DISP3Q9P2K9 1392 aa33.76■■■■□ 3
RPUSD3-206ENST00000433535 SYNMO15061 1565 aa33.76■■■□□ 2.99
RPUSD3-206ENST00000433535 ANKRD50Q9ULJ7 1429 aa33.74■■■□□ 2.99
RPUSD3-206ENST00000433535 LTKP29376 864 aa33.71■■■□□ 2.99
RPUSD3-206ENST00000433535 TXNDC2Q86VQ3 553 aa33.68■■■□□ 2.98
RPUSD3-206ENST00000433535 KDM5AP29375 1690 aaKnown RBP33.68■■■□□ 2.98
RPUSD3-206ENST00000433535 SCAF1Q9H7N4 1312 aaKnown RBP33.67■■■□□ 2.98
RPUSD3-206ENST00000433535 NOS1P29475 1434 aa33.67■■■□□ 2.98
RPUSD3-206ENST00000433535 TMEM2Q9UHN6 1383 aa33.66■■■□□ 2.98
RPUSD3-206ENST00000433535 PIP4K2BP78356 416 aa33.65■■■□□ 2.98
RPUSD3-206ENST00000433535 STAG3Q9UJ98 1225 aa33.65■■■□□ 2.98
RPUSD3-206ENST00000433535 LRRC7Q96NW7 1537 aa33.64■■■□□ 2.98
RPUSD3-206ENST00000433535 IDI1Q13907 227 aa33.64■■■□□ 2.98
RPUSD3-206ENST00000433535 ALKQ9UM73 1620 aa33.64■■■□□ 2.98
RPUSD3-206ENST00000433535 TET3O43151 1660 aa33.63■■■□□ 2.97
RPUSD3-206ENST00000433535 UNC13BO14795 1591 aa33.63■■■□□ 2.97
RPUSD3-206ENST00000433535 ADGRB3O60242 1522 aa33.63■■■□□ 2.97
RPUSD3-206ENST00000433535 TOM1O60784 492 aa33.62■■■□□ 2.97
RPUSD3-206ENST00000433535 EID1Q9Y6B2 187 aa33.62■■■□□ 2.97
RPUSD3-206ENST00000433535 PPARGC1BQ86YN6 1023 aaKnown RBP33.61■■■□□ 2.97
RPUSD3-206ENST00000433535 RPRD2Q5VT52 1461 aaKnown RBP33.59■■■□□ 2.97
RPUSD3-206ENST00000433535 GCC2Q8IWJ2 1684 aa33.58■■■□□ 2.97
RPUSD3-206ENST00000433535 ILDR2Q71H61 639 aa33.56■■■□□ 2.96
RPUSD3-206ENST00000433535 ROCK1Q13464 1354 aa33.56■■■□□ 2.96
RPUSD3-206ENST00000433535 HSPA1LP34931 641 aa33.54■■■□□ 2.96
RPUSD3-206ENST00000433535 ITGAEP38570 1179 aa33.51■■■□□ 2.95
RPUSD3-206ENST00000433535 MYO5BQ9ULV0 1848 aa33.5■■■□□ 2.95
RPUSD3-206ENST00000433535 E9PCH4 1651 aa33.49■■■□□ 2.95
RPUSD3-206ENST00000433535 SLC52A1Q9NWF4 448 aa33.49■■■□□ 2.95
RPUSD3-206ENST00000433535 IQGAP3Q86VI3 1631 aa33.49■■■□□ 2.95
RPUSD3-206ENST00000433535 XIRP1Q702N8 1843 aaKnown RBP33.49■■■□□ 2.95
RPUSD3-206ENST00000433535 TMEM131LA2VDJ0 1609 aa33.43■■■□□ 2.94
RPUSD3-206ENST00000433535 SLC26A8Q96RN1 970 aa33.42■■■□□ 2.94
RPUSD3-206ENST00000433535 ZFYVE9O95405 1425 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms