RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 PREX1Q8TCU6 1659 aa10.91□□□□□ -0.66
CNKSR3-202ENST00000433165 FKBP8Q14318 412 aa10.89□□□□□ -0.67
CNKSR3-202ENST00000433165 SHANK2Q9UPX8 1470 aa10.88□□□□□ -0.67
CNKSR3-202ENST00000433165 DHX29Q7Z478 1369 aaKnown RBP10.88□□□□□ -0.67
CNKSR3-202ENST00000433165 MSH5O43196 834 aa10.88□□□□□ -0.67
CNKSR3-202ENST00000433165 BCANQ96GW7 911 aa10.87□□□□□ -0.67
CNKSR3-202ENST00000433165 NPATQ14207 1427 aa10.87□□□□□ -0.67
CNKSR3-202ENST00000433165 EIF2AK4Q9P2K8 1649 aaKnown RBP10.87□□□□□ -0.67
CNKSR3-202ENST00000433165 PTPN23Q9H3S7 1636 aa10.87□□□□□ -0.67
CNKSR3-202ENST00000433165 ZNF644Q9H582 1327 aaPredicted RBP10.87□□□□□ -0.67
CNKSR3-202ENST00000433165 UHRF1BP1Q6BDS2 1440 aa10.86□□□□□ -0.67
CNKSR3-202ENST00000433165 C3P01024 1663 aa10.86□□□□□ -0.67
CNKSR3-202ENST00000433165 TCOF1Q13428 1488 aaKnown RBP10.86□□□□□ -0.67
CNKSR3-202ENST00000433165 LMTK3Q96Q04 1460 aa10.86□□□□□ -0.67
CNKSR3-202ENST00000433165 FANCIQ9NVI1 1328 aa10.86□□□□□ -0.67
CNKSR3-202ENST00000433165 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
CNKSR3-202ENST00000433165 CROCC2H7BZ55 1655 aa10.85□□□□□ -0.67
CNKSR3-202ENST00000433165 SETD1BQ9UPS6 1966 aaKnown RBP10.85□□□□□ -0.67
CNKSR3-202ENST00000433165 FGD6Q6ZV73 1430 aa10.84□□□□□ -0.67
CNKSR3-202ENST00000433165 ZC3H13Q5T200 1668 aaKnown RBP10.84□□□□□ -0.67
CNKSR3-202ENST00000433165 DUOX2Q9NRD8 1548 aa10.84□□□□□ -0.67
CNKSR3-202ENST00000433165 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
CNKSR3-202ENST00000433165 DNMT1P26358 1616 aaKnown RBP10.83□□□□□ -0.68
CNKSR3-202ENST00000433165 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.68
CNKSR3-202ENST00000433165 CLTCQ00610 1675 aaKnown RBP10.83□□□□□ -0.68
CNKSR3-202ENST00000433165 RNF17Q9BXT8 1623 aaKnown RBP10.82□□□□□ -0.68
CNKSR3-202ENST00000433165 NEFLP07196 543 aa10.81□□□□□ -0.68
CNKSR3-202ENST00000433165 DMRT2Q9Y5R5 561 aa10.81□□□□□ -0.68
CNKSR3-202ENST00000433165 ERBINQ96RT1 1412 aa10.81□□□□□ -0.68
CNKSR3-202ENST00000433165 ZMYM3Q14202 1370 aa10.81□□□□□ -0.68
CNKSR3-202ENST00000433165 GGT6Q6P531 493 aa10.8□□□□□ -0.68
CNKSR3-202ENST00000433165 DAPK1P53355 1430 aa10.8□□□□□ -0.68
CNKSR3-202ENST00000433165 PLPPR3Q6T4P5 718 aa10.8□□□□□ -0.68
CNKSR3-202ENST00000433165 ANKRD30AQ9BXX3 1397 aa10.8□□□□□ -0.68
CNKSR3-202ENST00000433165 KIF3BO15066 747 aa10.79□□□□□ -0.68
CNKSR3-202ENST00000433165 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
CNKSR3-202ENST00000433165 ABCC5O15440 1437 aa10.78□□□□□ -0.68
CNKSR3-202ENST00000433165 PZPP20742 1482 aa10.77□□□□□ -0.68
CNKSR3-202ENST00000433165 KIF15Q9NS87 1388 aa10.77□□□□□ -0.69
CNKSR3-202ENST00000433165 PTPRKQ15262 1439 aa10.77□□□□□ -0.69
CNKSR3-202ENST00000433165 MYO3AQ8NEV4 1616 aa10.77□□□□□ -0.69
CNKSR3-202ENST00000433165 ADGRL2O95490 1459 aa10.77□□□□□ -0.69
CNKSR3-202ENST00000433165 KANK1Q14678 1352 aa10.77□□□□□ -0.69
CNKSR3-202ENST00000433165 WASHC2CQ9Y4E1 1318 aa10.76□□□□□ -0.69
CNKSR3-202ENST00000433165 CEBPAP49715 358 aaPredicted RBP10.76□□□□□ -0.69
CNKSR3-202ENST00000433165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.76□□□□□ -0.69
CNKSR3-202ENST00000433165 PRDM15P57071 1507 aaPredicted RBP10.75□□□□□ -0.69
CNKSR3-202ENST00000433165 PLA2R1Q13018 1463 aa10.75□□□□□ -0.69
CNKSR3-202ENST00000433165 RRBP1Q9P2E9 1410 aaKnown RBP10.75□□□□□ -0.69
CNKSR3-202ENST00000433165 CEP170BQ9Y4F5 1589 aaPredicted RBP10.74□□□□□ -0.69
CNKSR3-202ENST00000433165 NLRP1Q9C000 1473 aa10.74□□□□□ -0.69
CNKSR3-202ENST00000433165 PTPRTO14522 1441 aa10.74□□□□□ -0.69
CNKSR3-202ENST00000433165 DEPDC5O75140 1603 aa10.74□□□□□ -0.69
CNKSR3-202ENST00000433165 ABCC3O15438 1527 aa10.74□□□□□ -0.69
CNKSR3-202ENST00000433165 A2ML1A8K2U0 1454 aa10.74□□□□□ -0.69
CNKSR3-202ENST00000433165 ITGAEP38570 1179 aa10.73□□□□□ -0.69
CNKSR3-202ENST00000433165 CCER2I3L3R5 266 aa10.73□□□□□ -0.69
CNKSR3-202ENST00000433165 FAM50AQ14320 339 aaKnown RBP10.73□□□□□ -0.69
CNKSR3-202ENST00000433165 TNRQ92752 1358 aa10.72□□□□□ -0.69
CNKSR3-202ENST00000433165 CAMSAP1Q5T5Y3 1602 aa10.72□□□□□ -0.69
CNKSR3-202ENST00000433165 NCOA1Q15788 1441 aa10.72□□□□□ -0.69
CNKSR3-202ENST00000433165 HSPA2P54652 639 aa10.72□□□□□ -0.69
CNKSR3-202ENST00000433165 PKD2Q13563 968 aa10.72□□□□□ -0.69
CNKSR3-202ENST00000433165 ROCK1Q13464 1354 aa10.71□□□□□ -0.69
CNKSR3-202ENST00000433165 ARHGAP31Q2M1Z3 1444 aa10.71□□□□□ -0.69
CNKSR3-202ENST00000433165 DEKP35659 375 aaKnown RBP10.71□□□□□ -0.69
CNKSR3-202ENST00000433165 MROH1Q8NDA8 1641 aa10.71□□□□□ -0.7
CNKSR3-202ENST00000433165 LMTK2Q8IWU2 1503 aa10.71□□□□□ -0.7
CNKSR3-202ENST00000433165 SPATA31D1Q6ZQQ2 1576 aa10.7□□□□□ -0.7
CNKSR3-202ENST00000433165 RRP7BPQ9NSQ0 103 aa10.69□□□□□ -0.7
CNKSR3-202ENST00000433165 CEP152O94986 1710 aa10.69□□□□□ -0.7
CNKSR3-202ENST00000433165 STRCQ7RTU9 1775 aa10.69□□□□□ -0.7
CNKSR3-202ENST00000433165 PPP1R15AO75807 674 aaPredicted RBP10.68□□□□□ -0.7
CNKSR3-202ENST00000433165 ANKRD50Q9ULJ7 1429 aa10.68□□□□□ -0.7
CNKSR3-202ENST00000433165 ERVK-7P63135 1459 aa10.68□□□□□ -0.7
CNKSR3-202ENST00000433165 VWDEQ8N2E2 1590 aa10.67□□□□□ -0.7
CNKSR3-202ENST00000433165 THEMISQ8N1K5 641 aaPredicted RBP10.67□□□□□ -0.7
CNKSR3-202ENST00000433165 POLR1AO95602 1720 aaPredicted RBP10.66□□□□□ -0.7
CNKSR3-202ENST00000433165 IQSEC2Q5JU85 1478 aa10.66□□□□□ -0.7
CNKSR3-202ENST00000433165 RPRD2Q5VT52 1461 aaKnown RBP10.66□□□□□ -0.7
CNKSR3-202ENST00000433165 ERICH6BQ5W0A0 696 aa10.66□□□□□ -0.7
CNKSR3-202ENST00000433165 UGGT1Q9NYU2 1555 aa10.66□□□□□ -0.7
CNKSR3-202ENST00000433165 KDM5AP29375 1690 aaKnown RBP10.66□□□□□ -0.7
CNKSR3-202ENST00000433165 DDX10Q13206 875 aaKnown RBP10.66□□□□□ -0.7
CNKSR3-202ENST00000433165 CHIC2Q9UKJ5 165 aa10.66□□□□□ -0.7
CNKSR3-202ENST00000433165 UNC13BO14795 1591 aa10.65□□□□□ -0.7
CNKSR3-202ENST00000433165 FBXO41Q8TF61 875 aa10.64□□□□□ -0.71
CNKSR3-202ENST00000433165 EFCAB6Q5THR3 1501 aa10.64□□□□□ -0.71
CNKSR3-202ENST00000433165 TET3O43151 1660 aa10.64□□□□□ -0.71
CNKSR3-202ENST00000433165 GCC2Q8IWJ2 1684 aa10.64□□□□□ -0.71
CNKSR3-202ENST00000433165 TRIM52Q96A61 297 aa10.64□□□□□ -0.71
CNKSR3-202ENST00000433165 ANKLE2Q86XL3 938 aa10.62□□□□□ -0.71
CNKSR3-202ENST00000433165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.712e-9■□□□□ 11.1
CNKSR3-202ENST00000433165 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
CNKSR3-202ENST00000433165 FBXO31Q5XUX0 539 aaPredicted RBP10.62□□□□□ -0.71
CNKSR3-202ENST00000433165 CERKQ8TCT0 537 aa10.61□□□□□ -0.71
CNKSR3-202ENST00000433165 IQGAP3Q86VI3 1631 aa10.61□□□□□ -0.71
CNKSR3-202ENST00000433165 ANP32CO43423 234 aa10.61□□□□□ -0.71
CNKSR3-202ENST00000433165 MED14O60244 1454 aa10.6□□□□□ -0.71
CNKSR3-202ENST00000433165 UBR1Q8IWV7 1749 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms