RNA–Protein interactions for RNA: ENST00000433094.1

LINC00494-203, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best)

Gene LINC00494, Length 3,071 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-203ENST00000433094 KCNA4P22459 653 aa12.91□□□□□ -0.34
LINC00494-203ENST00000433094 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
LINC00494-203ENST00000433094 GRPEL1Q9HAV7 217 aa12.91□□□□□ -0.34
LINC00494-203ENST00000433094 TRAK2O60296 914 aa12.91□□□□□ -0.34
LINC00494-203ENST00000433094 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
LINC00494-203ENST00000433094 FGD1P98174 961 aa12.9□□□□□ -0.34
LINC00494-203ENST00000433094 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.35
LINC00494-203ENST00000433094 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
LINC00494-203ENST00000433094 BCORL1Q5H9F3 1711 aa12.89□□□□□ -0.35
LINC00494-203ENST00000433094 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
LINC00494-203ENST00000433094 PDE4CQ08493 712 aa12.87□□□□□ -0.35
LINC00494-203ENST00000433094 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
LINC00494-203ENST00000433094 KDM6BO15054 1643 aa12.87□□□□□ -0.35
LINC00494-203ENST00000433094 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
LINC00494-203ENST00000433094 HMGXB3Q12766 1538 aa12.86□□□□□ -0.35
LINC00494-203ENST00000433094 CARD11Q9BXL7 1154 aa12.86□□□□□ -0.35
LINC00494-203ENST00000433094 CFTRP13569 1480 aa12.86□□□□□ -0.35
LINC00494-203ENST00000433094 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
LINC00494-203ENST00000433094 FAM13BQ9NYF5 915 aa12.84□□□□□ -0.35
LINC00494-203ENST00000433094 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
LINC00494-203ENST00000433094 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
LINC00494-203ENST00000433094 NESP48681 1621 aa12.83□□□□□ -0.35
LINC00494-203ENST00000433094 MAP7D2Q96T17 732 aa12.82□□□□□ -0.36
LINC00494-203ENST00000433094 CHMP5Q9NZZ3 219 aa12.82□□□□□ -0.36
LINC00494-203ENST00000433094 IGHDP01880 384 aa12.82□□□□□ -0.36
LINC00494-203ENST00000433094 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
LINC00494-203ENST00000433094 RIPK4P57078 832 aa12.81□□□□□ -0.36
LINC00494-203ENST00000433094 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
LINC00494-203ENST00000433094 GCC2Q8IWJ2 1684 aa12.81□□□□□ -0.36
LINC00494-203ENST00000433094 EFCAB5A4FU69 1503 aa12.81□□□□□ -0.36
LINC00494-203ENST00000433094 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
LINC00494-203ENST00000433094 CC2D1BQ5T0F9 858 aaKnown RBP12.8□□□□□ -0.36
LINC00494-203ENST00000433094 TBC1D32Q96NH3 1257 aa12.8□□□□□ -0.36
LINC00494-203ENST00000433094 OFD1O75665 1012 aa12.8□□□□□ -0.36
LINC00494-203ENST00000433094 DDX11L8A8MPP1 907 aa12.79□□□□□ -0.36
LINC00494-203ENST00000433094 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
LINC00494-203ENST00000433094 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
LINC00494-203ENST00000433094 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
LINC00494-203ENST00000433094 GAS2L3Q86XJ1 694 aa12.78□□□□□ -0.36
LINC00494-203ENST00000433094 ZSCAN30Q86W11 494 aa12.78□□□□□ -0.36
LINC00494-203ENST00000433094 DHX37Q8IY37 1157 aaKnown RBP12.78□□□□□ -0.36
LINC00494-203ENST00000433094 SMAP1Q8IYB5 467 aaPredicted RBP12.78□□□□□ -0.36
LINC00494-203ENST00000433094 ARID3AQ99856 593 aa12.78□□□□□ -0.36
LINC00494-203ENST00000433094 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.36
LINC00494-203ENST00000433094 GOLGA2Q08379 1002 aa12.77□□□□□ -0.36
LINC00494-203ENST00000433094 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.36
LINC00494-203ENST00000433094 SUPT6HQ7KZ85 1726 aaKnown RBP12.77□□□□□ -0.36
LINC00494-203ENST00000433094 BLMP54132 1417 aaPredicted RBP12.77□□□□□ -0.36
LINC00494-203ENST00000433094 KDM5CP41229 1560 aa12.77□□□□□ -0.36
LINC00494-203ENST00000433094 ZHX1Q9UKY1 873 aaPredicted RBP12.77□□□□□ -0.37
LINC00494-203ENST00000433094 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
LINC00494-203ENST00000433094 TERF1P54274 439 aa12.76□□□□□ -0.37
LINC00494-203ENST00000433094 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
LINC00494-203ENST00000433094 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
LINC00494-203ENST00000433094 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
LINC00494-203ENST00000433094 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
LINC00494-203ENST00000433094 NLRP1Q9C000 1473 aa12.76□□□□□ -0.37
LINC00494-203ENST00000433094 KDM2AQ9Y2K7 1162 aa12.75□□□□□ -0.37
LINC00494-203ENST00000433094 INSRP06213 1382 aa12.75□□□□□ -0.37
LINC00494-203ENST00000433094 EIF3AQ14152 1382 aaKnown RBP12.75□□□□□ -0.37
LINC00494-203ENST00000433094 UGGT2Q9NYU1 1516 aa12.75□□□□□ -0.37
LINC00494-203ENST00000433094 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
LINC00494-203ENST00000433094 ANP32BQ92688 251 aaKnown RBP12.75□□□□□ -0.37
LINC00494-203ENST00000433094 CCDC173Q0VFZ6 552 aa12.75□□□□□ -0.37
LINC00494-203ENST00000433094 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
LINC00494-203ENST00000433094 BCAR3O75815 825 aa12.74□□□□□ -0.37
LINC00494-203ENST00000433094 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
LINC00494-203ENST00000433094 MBD5Q9P267 1494 aa12.74□□□□□ -0.37
LINC00494-203ENST00000433094 ZMYM4Q5VZL5 1548 aa12.74□□□□□ -0.37
LINC00494-203ENST00000433094 EHBP1L1Q8N3D4 1523 aa12.74□□□□□ -0.37
LINC00494-203ENST00000433094 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
LINC00494-203ENST00000433094 PLEKHH1Q9ULM0 1364 aa12.73□□□□□ -0.37
LINC00494-203ENST00000433094 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
LINC00494-203ENST00000433094 PHF23Q9BUL5 403 aaPredicted RBP12.73□□□□□ -0.37
LINC00494-203ENST00000433094 MTERF4Q7Z6M4 381 aaKnown RBP12.72□□□□□ -0.37
LINC00494-203ENST00000433094 CLUAP1Q96AJ1 413 aa12.72□□□□□ -0.37
LINC00494-203ENST00000433094 NASPP49321 788 aaPredicted RBP12.71□□□□□ -0.37
LINC00494-203ENST00000433094 SLFN5Q08AF3 891 aa12.71□□□□□ -0.37
LINC00494-203ENST00000433094 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00494-203ENST00000433094 CGNL1Q0VF96 1302 aa12.71□□□□□ -0.37
LINC00494-203ENST00000433094 UQCRHLA0A096LP55 91 aa12.71□□□□□ -0.38
LINC00494-203ENST00000433094 UQCRHP07919 91 aa12.71□□□□□ -0.38
LINC00494-203ENST00000433094 PKD2Q13563 968 aa12.71□□□□□ -0.38
LINC00494-203ENST00000433094 PPP1R9BQ96SB3 815 aa12.71□□□□□ -0.38
LINC00494-203ENST00000433094 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
LINC00494-203ENST00000433094 SKOR2Q2VWA4 1001 aaPredicted RBP12.7□□□□□ -0.38
LINC00494-203ENST00000433094 HSCBQ8IWL3 235 aa12.7□□□□□ -0.38
LINC00494-203ENST00000433094 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
LINC00494-203ENST00000433094 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
LINC00494-203ENST00000433094 COG6Q9Y2V7 657 aa12.7□□□□□ -0.38
LINC00494-203ENST00000433094 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
LINC00494-203ENST00000433094 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
LINC00494-203ENST00000433094 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
LINC00494-203ENST00000433094 KIF14Q15058 1648 aa12.69□□□□□ -0.38
LINC00494-203ENST00000433094 CANXP27824 592 aaKnown RBP12.69□□□□□ -0.38
LINC00494-203ENST00000433094 GBP4Q96PP9 640 aa12.69□□□□□ -0.38
LINC00494-203ENST00000433094 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
LINC00494-203ENST00000433094 ZNF521Q96K83 1311 aa12.68□□□□□ -0.38
LINC00494-203ENST00000433094 VIRMAQ69YN4 1812 aaKnown RBP12.68□□□□□ -0.38
LINC00494-203ENST00000433094 PANK3Q9H999 370 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms