RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 ASXL2Q76L83 1435 aa28.4■■■□□ 2.14
SDHAF3-202ENST00000432641 ARID4BQ4LE39 1312 aaPredicted RBP28.39■■■□□ 2.13
SDHAF3-202ENST00000432641 USP47Q96K76 1375 aa28.37■■■□□ 2.13
SDHAF3-202ENST00000432641 INO80Q9ULG1 1556 aaPredicted RBP28.36■■■□□ 2.13
SDHAF3-202ENST00000432641 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
SDHAF3-202ENST00000432641 DEPDC5O75140 1603 aa28.32■■■□□ 2.12
SDHAF3-202ENST00000432641 PLA2R1Q13018 1463 aa28.32■■■□□ 2.12
SDHAF3-202ENST00000432641 NPM1P06748 294 aaKnown RBP eCLIP28.32■■■□□ 2.12
SDHAF3-202ENST00000432641 KIF7Q2M1P5 1343 aa28.31■■■□□ 2.12
SDHAF3-202ENST00000432641 ADGRL1O94910 1474 aa28.31■■■□□ 2.12
SDHAF3-202ENST00000432641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.31■■■□□ 2.12
SDHAF3-202ENST00000432641 CFAP74Q9C0B2 1584 aa28.3■■■□□ 2.12
SDHAF3-202ENST00000432641 C11orf95C9JLR9 678 aaPredicted RBP28.3■■■□□ 2.12
SDHAF3-202ENST00000432641 ZNF326Q5BKZ1 582 aaKnown RBP28.3■■■□□ 2.12
SDHAF3-202ENST00000432641 EIF2AK4Q9P2K8 1649 aaKnown RBP28.29■■■□□ 2.12
SDHAF3-202ENST00000432641 DCAF11Q8TEB1 546 aa28.27■■■□□ 2.12
SDHAF3-202ENST00000432641 AFAP1Q8N556 730 aa28.25■■■□□ 2.11
SDHAF3-202ENST00000432641 PRAG1Q86YV5 1406 aa28.25■■■□□ 2.11
SDHAF3-202ENST00000432641 SCAPERQ9BY12 1400 aa28.25■■■□□ 2.11
SDHAF3-202ENST00000432641 TRPM1Q7Z4N2 1603 aa28.25■■■□□ 2.11
SDHAF3-202ENST00000432641 ROCK2O75116 1388 aaKnown RBP28.24■■■□□ 2.11
SDHAF3-202ENST00000432641 CARD11Q9BXL7 1154 aa28.24■■■□□ 2.11
SDHAF3-202ENST00000432641 LAMC1P11047 1609 aa28.24■■■□□ 2.11
SDHAF3-202ENST00000432641 BCORL1Q5H9F3 1711 aa28.24■■■□□ 2.11
SDHAF3-202ENST00000432641 TET3O43151 1660 aa28.22■■■□□ 2.11
SDHAF3-202ENST00000432641 VWDEQ8N2E2 1590 aa28.2■■■□□ 2.11
SDHAF3-202ENST00000432641 E9PCH4 1651 aa28.2■■■□□ 2.1
SDHAF3-202ENST00000432641 A2MP01023 1474 aa28.2■■■□□ 2.1
SDHAF3-202ENST00000432641 KANK1Q14678 1352 aa28.2■■■□□ 2.1
SDHAF3-202ENST00000432641 KDM2AQ9Y2K7 1162 aa28.19■■■□□ 2.1
SDHAF3-202ENST00000432641 ZNF518AQ6AHZ1 1483 aa28.19■■■□□ 2.1
SDHAF3-202ENST00000432641 TRPM2O94759 1503 aa28.18■■■□□ 2.1
SDHAF3-202ENST00000432641 PRKRIP1Q9H875 184 aaPredicted RBP28.17■■■□□ 2.1
SDHAF3-202ENST00000432641 GPRASP1Q5JY77 1395 aa28.17■■■□□ 2.1
SDHAF3-202ENST00000432641 DHX29Q7Z478 1369 aaKnown RBP28.17■■■□□ 2.1
SDHAF3-202ENST00000432641 PRDM15P57071 1507 aaPredicted RBP28.16■■■□□ 2.1
SDHAF3-202ENST00000432641 SPHKAPQ2M3C7 1700 aa28.15■■■□□ 2.1
SDHAF3-202ENST00000432641 PTPRTO14522 1441 aa28.14■■■□□ 2.1
SDHAF3-202ENST00000432641 STAC3Q96MF2 364 aa28.14■■■□□ 2.09
SDHAF3-202ENST00000432641 CD109Q6YHK3 1445 aa28.12■■■□□ 2.09
SDHAF3-202ENST00000432641 CEP152O94986 1710 aa28.12■■■□□ 2.09
SDHAF3-202ENST00000432641 KIDINS220Q9ULH0 1771 aa28.12■■■□□ 2.09
SDHAF3-202ENST00000432641 NEURL4Q96JN8 1562 aa28.11■■■□□ 2.09
SDHAF3-202ENST00000432641 RGL3Q3MIN7 710 aa28.07■■■□□ 2.08
SDHAF3-202ENST00000432641 MROH1Q8NDA8 1641 aa28.06■■■□□ 2.08
SDHAF3-202ENST00000432641 POGZQ7Z3K3 1410 aa28.06■■■□□ 2.08
SDHAF3-202ENST00000432641 MYT1LQ9UL68 1186 aa28.05■■■□□ 2.08
SDHAF3-202ENST00000432641 MLH3Q9UHC1 1453 aa28.05■■■□□ 2.08
SDHAF3-202ENST00000432641 RNF17Q9BXT8 1623 aaKnown RBP28.04■■■□□ 2.08
SDHAF3-202ENST00000432641 ST20-MTHFSA0A0A6YYL1 179 aa28.04■■■□□ 2.08
SDHAF3-202ENST00000432641 NEO1Q92859 1461 aa28.04■■■□□ 2.08
SDHAF3-202ENST00000432641 LMTK2Q8IWU2 1503 aa28.03■■■□□ 2.08
SDHAF3-202ENST00000432641 KIF3BO15066 747 aa28.03■■■□□ 2.08
SDHAF3-202ENST00000432641 CLTCL1P53675 1640 aa28.01■■■□□ 2.07
SDHAF3-202ENST00000432641 HECW2Q9P2P5 1572 aa28.01■■■□□ 2.07
SDHAF3-202ENST00000432641 SUPT16HQ9Y5B9 1047 aaKnown RBP27.99■■■□□ 2.07
SDHAF3-202ENST00000432641 EFCAB6Q5THR3 1501 aa27.99■■■□□ 2.07
SDHAF3-202ENST00000432641 KTN1Q86UP2 1357 aaKnown RBP27.99■■■□□ 2.07
SDHAF3-202ENST00000432641 MADDQ8WXG6 1647 aa27.98■■■□□ 2.07
SDHAF3-202ENST00000432641 MRS2Q9HD23 443 aa27.96■■■□□ 2.07
SDHAF3-202ENST00000432641 HNRNPUQ00839 825 aaKnown RBP eCLIP27.94■■■□□ 2.06
SDHAF3-202ENST00000432641 POLR3GLQ9BT43 218 aa27.93■■■□□ 2.06
SDHAF3-202ENST00000432641 COL17A1Q9UMD9 1497 aaPredicted RBP27.92■■■□□ 2.06
SDHAF3-202ENST00000432641 NBPF1Q3BBV0 1214 aa27.92■■■□□ 2.06
SDHAF3-202ENST00000432641 KIAA1210Q9ULL0 1709 aa27.92■■■□□ 2.06
SDHAF3-202ENST00000432641 PPRC1Q5VV67 1664 aaKnown RBP27.89■■■□□ 2.06
SDHAF3-202ENST00000432641 KIF1BO60333 1816 aa27.89■■■□□ 2.06
SDHAF3-202ENST00000432641 MAP3K4Q9Y6R4 1608 aa27.89■■■□□ 2.05
SDHAF3-202ENST00000432641 GLI2P10070 1586 aa27.89■■■□□ 2.05
SDHAF3-202ENST00000432641 FRMPD1Q5SYB0 1578 aa27.88■■■□□ 2.05
SDHAF3-202ENST00000432641 IQGAP1P46940 1657 aa27.88■■■□□ 2.05
SDHAF3-202ENST00000432641 CCDC184Q52MB2 194 aa27.86■■■□□ 2.05
SDHAF3-202ENST00000432641 MYOM2P54296 1465 aa27.86■■■□□ 2.05
SDHAF3-202ENST00000432641 NEFLP07196 543 aa27.85■■■□□ 2.05
SDHAF3-202ENST00000432641 ABCA6Q8N139 1617 aa27.85■■■□□ 2.05
SDHAF3-202ENST00000432641 RALBP1Q15311 655 aa27.83■■■□□ 2.05
SDHAF3-202ENST00000432641 TESK2Q96S53 571 aa27.83■■■□□ 2.05
SDHAF3-202ENST00000432641 TMF1P82094 1093 aa27.82■■■□□ 2.04
SDHAF3-202ENST00000432641 WASHC2CQ9Y4E1 1318 aa27.81■■■□□ 2.04
SDHAF3-202ENST00000432641 ZBED9Q6R2W3 1325 aa27.8■■■□□ 2.04
SDHAF3-202ENST00000432641 SCAF11Q99590 1463 aaKnown RBP27.8■■■□□ 2.04
SDHAF3-202ENST00000432641 RICTORQ6R327 1708 aa27.79■■■□□ 2.04
SDHAF3-202ENST00000432641 IFT172Q9UG01 1749 aa27.79■■■□□ 2.04
SDHAF3-202ENST00000432641 FAM9BQ8IZU0 186 aa27.79■■■□□ 2.04
SDHAF3-202ENST00000432641 EIF3AQ14152 1382 aaKnown RBP27.76■■■□□ 2.04
SDHAF3-202ENST00000432641 DIP2CQ9Y2E4 1556 aa27.76■■■□□ 2.03
SDHAF3-202ENST00000432641 BRD4O60885 1362 aaPredicted RBP27.76■■■□□ 2.03
SDHAF3-202ENST00000432641 MYBBP1AQ9BQG0 1328 aaKnown RBP27.75■■■□□ 2.03
SDHAF3-202ENST00000432641 SLC24A1O60721 1099 aa27.75■■■□□ 2.03
SDHAF3-202ENST00000432641 DISP3Q9P2K9 1392 aa27.75■■■□□ 2.03
SDHAF3-202ENST00000432641 ABCC3O15438 1527 aa27.75■■■□□ 2.03
SDHAF3-202ENST00000432641 RIMBP3CA6NJZ7 1639 aa27.75■■■□□ 2.03
SDHAF3-202ENST00000432641 RIMBP3BA6NNM3 1639 aa27.75■■■□□ 2.03
SDHAF3-202ENST00000432641 RIMBP3Q9UFD9 1639 aa27.75■■■□□ 2.03
SDHAF3-202ENST00000432641 ADGRB3O60242 1522 aa27.74■■■□□ 2.03
SDHAF3-202ENST00000432641 ZC3H13Q5T200 1668 aaKnown RBP27.73■■■□□ 2.03
SDHAF3-202ENST00000432641 CDCA8Q53HL2 280 aa27.73■■■□□ 2.03
SDHAF3-202ENST00000432641 NPATQ14207 1427 aa27.72■■■□□ 2.03
SDHAF3-202ENST00000432641 FKBP8Q14318 412 aa27.72■■■□□ 2.03
SDHAF3-202ENST00000432641 UGGT1Q9NYU2 1555 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms