RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 PLEKHH2Q8IVE3 1493 aa22.77■■□□□ 1.24
CHFR-203ENST00000432561 CCDC144AA2RUR9 1427 aa22.75■■□□□ 1.23
CHFR-203ENST00000432561 ROCK2O75116 1388 aaKnown RBP22.75■■□□□ 1.23
CHFR-203ENST00000432561 ZBED9Q6R2W3 1325 aa22.74■■□□□ 1.23
CHFR-203ENST00000432561 PLA2R1Q13018 1463 aa22.74■■□□□ 1.23
CHFR-203ENST00000432561 NBPF1Q3BBV0 1214 aa22.73■■□□□ 1.23
CHFR-203ENST00000432561 ZCCHC11Q5TAX3 1644 aaKnown RBP22.72■■□□□ 1.23
CHFR-203ENST00000432561 MAST1Q9Y2H9 1570 aa22.71■■□□□ 1.23
CHFR-203ENST00000432561 UNC13BO14795 1591 aa22.7■■□□□ 1.22
CHFR-203ENST00000432561 ARID4BQ4LE39 1312 aaPredicted RBP22.68■■□□□ 1.22
CHFR-203ENST00000432561 PRAG1Q86YV5 1406 aa22.68■■□□□ 1.22
CHFR-203ENST00000432561 TRPM1Q7Z4N2 1603 aa22.66■■□□□ 1.22
CHFR-203ENST00000432561 PLXNC1O60486 1568 aa22.66■■□□□ 1.22
CHFR-203ENST00000432561 A2MP01023 1474 aa22.66■■□□□ 1.22
CHFR-203ENST00000432561 PLCH2O75038 1416 aa22.65■■□□□ 1.22
CHFR-203ENST00000432561 TRAPPC8Q9Y2L5 1435 aa22.65■■□□□ 1.22
CHFR-203ENST00000432561 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
CHFR-203ENST00000432561 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.21
CHFR-203ENST00000432561 EFCAB2Q5VUJ9 269 aa22.63■■□□□ 1.21
CHFR-203ENST00000432561 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
CHFR-203ENST00000432561 TMC1Q8TDI8 760 aa22.62■■□□□ 1.21
CHFR-203ENST00000432561 AFAP1Q8N556 730 aa22.62■■□□□ 1.21
CHFR-203ENST00000432561 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
CHFR-203ENST00000432561 PNISRQ8TF01 805 aaKnown RBP22.6■■□□□ 1.21
CHFR-203ENST00000432561 ABCC1P33527 1531 aa22.59■■□□□ 1.21
CHFR-203ENST00000432561 E9PCH4 1651 aa22.57■■□□□ 1.2
CHFR-203ENST00000432561 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
CHFR-203ENST00000432561 ERBINQ96RT1 1412 aa22.56■■□□□ 1.2
CHFR-203ENST00000432561 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
CHFR-203ENST00000432561 UHRF1BP1LA0JNW5 1464 aa22.54■■□□□ 1.2
CHFR-203ENST00000432561 MAGI2Q86UL8 1455 aa22.54■■□□□ 1.2
CHFR-203ENST00000432561 DISP3Q9P2K9 1392 aa22.54■■□□□ 1.2
CHFR-203ENST00000432561 PPP4R2Q9NY27 417 aa22.53■■□□□ 1.2
CHFR-203ENST00000432561 MYBBP1AQ9BQG0 1328 aaKnown RBP22.52■■□□□ 1.2
CHFR-203ENST00000432561 TESK2Q96S53 571 aa22.51■■□□□ 1.19
CHFR-203ENST00000432561 GPRASP1Q5JY77 1395 aa22.5■■□□□ 1.19
CHFR-203ENST00000432561 SALL2Q9Y467 1007 aaPredicted RBP22.5■■□□□ 1.19
CHFR-203ENST00000432561 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
CHFR-203ENST00000432561 MYT1LQ9UL68 1186 aa22.49■■□□□ 1.19
CHFR-203ENST00000432561 NUDCQ9Y266 331 aa22.49■■□□□ 1.19
CHFR-203ENST00000432561 PRDM15P57071 1507 aaPredicted RBP22.49■■□□□ 1.19
CHFR-203ENST00000432561 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
CHFR-203ENST00000432561 RALBP1Q15311 655 aa22.47■■□□□ 1.19
CHFR-203ENST00000432561 ZFYVE16Q7Z3T8 1539 aa22.46■■□□□ 1.19
CHFR-203ENST00000432561 ATP10AO60312 1499 aa22.46■■□□□ 1.19
CHFR-203ENST00000432561 PER1O15534 1290 aaPredicted RBP22.46■■□□□ 1.19
CHFR-203ENST00000432561 COL17A1Q9UMD9 1497 aaPredicted RBP22.46■■□□□ 1.19
CHFR-203ENST00000432561 BRD4O60885 1362 aaPredicted RBP22.45■■□□□ 1.18
CHFR-203ENST00000432561 ERICH6BQ5W0A0 696 aa22.45■■□□□ 1.18
CHFR-203ENST00000432561 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
CHFR-203ENST00000432561 KTN1Q86UP2 1357 aaKnown RBP22.44■■□□□ 1.18
CHFR-203ENST00000432561 PANK3Q9H999 370 aa22.44■■□□□ 1.18
CHFR-203ENST00000432561 EIF2AK4Q9P2K8 1649 aaKnown RBP22.42■■□□□ 1.18
CHFR-203ENST00000432561 PARD3Q8TEW0 1356 aa22.42■■□□□ 1.18
CHFR-203ENST00000432561 WDR7Q9Y4E6 1490 aa22.42■■□□□ 1.18
CHFR-203ENST00000432561 FANCAO15360 1455 aa22.42■■□□□ 1.18
CHFR-203ENST00000432561 LAMC1P11047 1609 aa22.41■■□□□ 1.18
CHFR-203ENST00000432561 KIF3BO15066 747 aa22.4■■□□□ 1.18
CHFR-203ENST00000432561 NLRP13Q86W25 1043 aa22.4■■□□□ 1.18
CHFR-203ENST00000432561 SCAPERQ9BY12 1400 aa22.39■■□□□ 1.17
CHFR-203ENST00000432561 TMF1P82094 1093 aa22.39■■□□□ 1.17
CHFR-203ENST00000432561 CLTCL1P53675 1640 aa22.37■■□□□ 1.17
CHFR-203ENST00000432561 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
CHFR-203ENST00000432561 RTEL1-TNFRSF6BF6WH68 1400 aa22.37■■□□□ 1.17
CHFR-203ENST00000432561 ATP7AQ04656 1500 aa22.37■■□□□ 1.17
CHFR-203ENST00000432561 RNF17Q9BXT8 1623 aaKnown RBP22.37■■□□□ 1.17
CHFR-203ENST00000432561 MADDQ8WXG6 1647 aa22.36■■□□□ 1.17
CHFR-203ENST00000432561 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
CHFR-203ENST00000432561 TRPM2O94759 1503 aa22.35■■□□□ 1.17
CHFR-203ENST00000432561 ADGRL1O94910 1474 aa22.34■■□□□ 1.17
CHFR-203ENST00000432561 ANP32EQ9BTT0 268 aa22.34■■□□□ 1.17
CHFR-203ENST00000432561 ARAP3Q8WWN8 1544 aa22.34■■□□□ 1.17
CHFR-203ENST00000432561 CEP152O94986 1710 aa22.33■■□□□ 1.17
CHFR-203ENST00000432561 MYT1Q01538 1121 aa22.33■■□□□ 1.16
CHFR-203ENST00000432561 RNF123Q5XPI4 1314 aa22.33■■□□□ 1.16
CHFR-203ENST00000432561 UGGT1Q9NYU2 1555 aa22.33■■□□□ 1.16
CHFR-203ENST00000432561 INO80Q9ULG1 1556 aaPredicted RBP22.33■■□□□ 1.16
CHFR-203ENST00000432561 DEPDC5O75140 1603 aa22.32■■□□□ 1.16
CHFR-203ENST00000432561 ASXL2Q76L83 1435 aa22.31■■□□□ 1.16
CHFR-203ENST00000432561 MSH5O43196 834 aa22.3■■□□□ 1.16
CHFR-203ENST00000432561 PTPRTO14522 1441 aa22.3■■□□□ 1.16
CHFR-203ENST00000432561 TET3O43151 1660 aa22.3■■□□□ 1.16
CHFR-203ENST00000432561 CDCA7LQ96GN5 454 aa22.29■■□□□ 1.16
CHFR-203ENST00000432561 IQGAP1P46940 1657 aa22.29■■□□□ 1.16
CHFR-203ENST00000432561 KANK1Q14678 1352 aa22.28■■□□□ 1.16
CHFR-203ENST00000432561 CCDC136Q96JN2 1154 aa22.27■■□□□ 1.16
CHFR-203ENST00000432561 CFAP65Q6ZU64 1925 aaKnown RBP22.25■■□□□ 1.15
CHFR-203ENST00000432561 MROH1Q8NDA8 1641 aa22.24■■□□□ 1.15
CHFR-203ENST00000432561 CFAP70Q5T0N1 1121 aa22.24■■□□□ 1.15
CHFR-203ENST00000432561 VWDEQ8N2E2 1590 aa22.24■■□□□ 1.15
CHFR-203ENST00000432561 WASHC2CQ9Y4E1 1318 aa22.23■■□□□ 1.15
CHFR-203ENST00000432561 SCAF11Q99590 1463 aaKnown RBP22.22■■□□□ 1.15
CHFR-203ENST00000432561 ADGRF5Q8IZF2 1346 aa22.21■■□□□ 1.15
CHFR-203ENST00000432561 KIDINS220Q9ULH0 1771 aa22.21■■□□□ 1.15
CHFR-203ENST00000432561 KNSTRNQ9Y448 316 aa22.21■■□□□ 1.15
CHFR-203ENST00000432561 RCAN3Q9UKA8 241 aa22.21■■□□□ 1.15
CHFR-203ENST00000432561 RRP1P56182 461 aaKnown RBP22.2■■□□□ 1.14
CHFR-203ENST00000432561 ADAMTS8Q9UP79 889 aa22.18■■□□□ 1.14
CHFR-203ENST00000432561 CHGAP10645 457 aaKnown RBP22.18■■□□□ 1.14
CHFR-203ENST00000432561 EXOC6Q8TAG9 804 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms