RNA–Protein interactions for RNA: ENST00000432242.5

VWA3B-204, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 5,324 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-204ENST00000432242 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
VWA3B-204ENST00000432242 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
VWA3B-204ENST00000432242 RASSF8Q8NHQ8 419 aa18.79■□□□□ 0.6
VWA3B-204ENST00000432242 KIF3AQ9Y496 699 aa18.78■□□□□ 0.6
VWA3B-204ENST00000432242 CLUAP1Q96AJ1 413 aa18.78■□□□□ 0.6
VWA3B-204ENST00000432242 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
VWA3B-204ENST00000432242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.76■□□□□ 0.59
VWA3B-204ENST00000432242 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
VWA3B-204ENST00000432242 GTF2E1P29083 439 aaPredicted RBP18.76■□□□□ 0.59
VWA3B-204ENST00000432242 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
VWA3B-204ENST00000432242 ST18O60284 1047 aa18.75■□□□□ 0.59
VWA3B-204ENST00000432242 GOLGA6L3A6NEY3 463 aa18.75■□□□□ 0.59
VWA3B-204ENST00000432242 FRAT2O75474 233 aaPredicted RBP18.75■□□□□ 0.59
VWA3B-204ENST00000432242 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
VWA3B-204ENST00000432242 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
VWA3B-204ENST00000432242 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
VWA3B-204ENST00000432242 TOMM22Q9NS69 142 aa18.74■□□□□ 0.59
VWA3B-204ENST00000432242 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
VWA3B-204ENST00000432242 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
VWA3B-204ENST00000432242 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
VWA3B-204ENST00000432242 PHF14O94880 888 aa18.71■□□□□ 0.59
VWA3B-204ENST00000432242 MYBBP1AQ9BQG0 1328 aaKnown RBP18.71■□□□□ 0.59
VWA3B-204ENST00000432242 CHMP4CQ96CF2 233 aa18.71■□□□□ 0.59
VWA3B-204ENST00000432242 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
VWA3B-204ENST00000432242 CCDC144AA2RUR9 1427 aa18.7■□□□□ 0.58
VWA3B-204ENST00000432242 IPO9Q96P70 1041 aaKnown RBP18.7■□□□□ 0.58
VWA3B-204ENST00000432242 MARCH6O60337 910 aa18.69■□□□□ 0.58
VWA3B-204ENST00000432242 NUTM2FA1L443 756 aa18.68■□□□□ 0.58
VWA3B-204ENST00000432242 COG3Q96JB2 828 aa18.68■□□□□ 0.58
VWA3B-204ENST00000432242 SF3A1Q15459 793 aaKnown RBP18.68■□□□□ 0.58
VWA3B-204ENST00000432242 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
VWA3B-204ENST00000432242 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
VWA3B-204ENST00000432242 CGNL1Q0VF96 1302 aa18.66■□□□□ 0.58
VWA3B-204ENST00000432242 JPH4Q96JJ6 628 aa18.66■□□□□ 0.58
VWA3B-204ENST00000432242 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
VWA3B-204ENST00000432242 TPM3P06753 285 aa18.65■□□□□ 0.58
VWA3B-204ENST00000432242 GOLGA6L1Q8N7Z2 621 aa18.65■□□□□ 0.58
VWA3B-204ENST00000432242 FOXD4L1Q9NU39 408 aa18.65■□□□□ 0.58
VWA3B-204ENST00000432242 CEP89Q96ST8 783 aa18.65■□□□□ 0.58
VWA3B-204ENST00000432242 PANK3Q9H999 370 aa18.65■□□□□ 0.58
VWA3B-204ENST00000432242 CREBRFQ8IUR6 639 aa18.65■□□□□ 0.58
VWA3B-204ENST00000432242 RRP7AQ9Y3A4 280 aaKnown RBP18.64■□□□□ 0.57
VWA3B-204ENST00000432242 A0A0U1RQG5 324 aaPredicted RBP18.64■□□□□ 0.57
VWA3B-204ENST00000432242 USP35Q9P2H5 1018 aa18.64■□□□□ 0.57
VWA3B-204ENST00000432242 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
VWA3B-204ENST00000432242 VPS53Q5VIR6 699 aa18.64■□□□□ 0.57
VWA3B-204ENST00000432242 ST20-MTHFSA0A0A6YYL1 179 aa18.63■□□□□ 0.57
VWA3B-204ENST00000432242 E9PSI1 815 aa18.63■□□□□ 0.57
VWA3B-204ENST00000432242 H3BQV1 296 aa18.63■□□□□ 0.57
VWA3B-204ENST00000432242 IFFO2Q5TF58 517 aa18.63■□□□□ 0.57
VWA3B-204ENST00000432242 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
VWA3B-204ENST00000432242 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
VWA3B-204ENST00000432242 CENPQQ7L2Z9 268 aaPredicted RBP18.62■□□□□ 0.57
VWA3B-204ENST00000432242 DDX11L8A8MPP1 907 aa18.62■□□□□ 0.57
VWA3B-204ENST00000432242 TEFQ10587 303 aa18.62■□□□□ 0.57
VWA3B-204ENST00000432242 RILPL2Q969X0 211 aa18.61■□□□□ 0.57
VWA3B-204ENST00000432242 ATP6V1DQ9Y5K8 247 aa18.61■□□□□ 0.57
VWA3B-204ENST00000432242 PRM3Q9NNZ6 103 aa18.61■□□□□ 0.57
VWA3B-204ENST00000432242 TOP2AP11388 1531 aaKnown RBP18.61■□□□□ 0.57
VWA3B-204ENST00000432242 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
VWA3B-204ENST00000432242 NEXNQ0ZGT2 675 aa18.6■□□□□ 0.57
VWA3B-204ENST00000432242 FAM184AQ8NB25 1140 aa18.6■□□□□ 0.57
VWA3B-204ENST00000432242 EVA1CP58658 441 aa18.6■□□□□ 0.57
VWA3B-204ENST00000432242 ANKRD45Q5TZF3 282 aa18.59■□□□□ 0.57
VWA3B-204ENST00000432242 TTC5Q8N0Z6 440 aa18.59■□□□□ 0.57
VWA3B-204ENST00000432242 ELL2O00472 640 aaPredicted RBP18.58■□□□□ 0.56
VWA3B-204ENST00000432242 SYNE3Q6ZMZ3 975 aa18.58■□□□□ 0.56
VWA3B-204ENST00000432242 TPD52L1Q16890 204 aaPredicted RBP18.58■□□□□ 0.56
VWA3B-204ENST00000432242 PDE4CQ08493 712 aa18.57■□□□□ 0.56
VWA3B-204ENST00000432242 DIAPH3Q9NSV4 1193 aa18.57■□□□□ 0.56
VWA3B-204ENST00000432242 AMOTL1Q8IY63 956 aa18.56■□□□□ 0.56
VWA3B-204ENST00000432242 FOXD4L5Q5VV16 416 aaPredicted RBP18.56■□□□□ 0.56
VWA3B-204ENST00000432242 RUFY2Q8WXA3 655 aa18.56■□□□□ 0.56
VWA3B-204ENST00000432242 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
VWA3B-204ENST00000432242 NOL10Q9BSC4 688 aaKnown RBP18.56■□□□□ 0.56
VWA3B-204ENST00000432242 TSR1Q2NL82 804 aaKnown RBP18.56■□□□□ 0.56
VWA3B-204ENST00000432242 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
VWA3B-204ENST00000432242 CPLX2Q6PUV4 134 aaKnown RBP18.55■□□□□ 0.56
VWA3B-204ENST00000432242 PES1O00541 588 aaKnown RBP18.54■□□□□ 0.56
VWA3B-204ENST00000432242 TPM2P07951 284 aa18.54■□□□□ 0.56
VWA3B-204ENST00000432242 ARID3AQ99856 593 aa18.54■□□□□ 0.56
VWA3B-204ENST00000432242 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
VWA3B-204ENST00000432242 PTPRGP23470 1445 aa18.53■□□□□ 0.56
VWA3B-204ENST00000432242 C9orf78Q9NZ63 289 aaPredicted RBP18.53■□□□□ 0.56
VWA3B-204ENST00000432242 MINK1Q8N4C8 1332 aaPredicted RBP18.53■□□□□ 0.56
VWA3B-204ENST00000432242 SKOR2Q2VWA4 1001 aaPredicted RBP18.53■□□□□ 0.56
VWA3B-204ENST00000432242 NGEFQ8N5V2 710 aa18.53■□□□□ 0.56
VWA3B-204ENST00000432242 GOLGA6L19H0YKK7 550 aa18.52■□□□□ 0.56
VWA3B-204ENST00000432242 TPM1P09493 284 aa18.52■□□□□ 0.55
VWA3B-204ENST00000432242 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.55
VWA3B-204ENST00000432242 USP47Q96K76 1375 aa18.51■□□□□ 0.55
VWA3B-204ENST00000432242 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
VWA3B-204ENST00000432242 API5Q9BZZ5 524 aaKnown RBP18.51■□□□□ 0.55
VWA3B-204ENST00000432242 REC8O95072 547 aa18.51■□□□□ 0.55
VWA3B-204ENST00000432242 ZKSCAN1P17029 563 aaPredicted RBP18.51■□□□□ 0.55
VWA3B-204ENST00000432242 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
VWA3B-204ENST00000432242 DDX19BQ9UMR2 479 aa18.51■□□□□ 0.55
VWA3B-204ENST00000432242 BECN2A8MW95 431 aa18.5■□□□□ 0.55
VWA3B-204ENST00000432242 DDX58O95786 925 aaKnown RBP18.5■□□□□ 0.55
VWA3B-204ENST00000432242 TRIM34Q9BYJ4 488 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms