RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 PLCB2Q00722 1185 aa12.56□□□□□ -0.4
FN1-209ENST00000432072 NGEFQ8N5V2 710 aa12.56□□□□□ -0.4
FN1-209ENST00000432072 TEFQ10587 303 aa12.55□□□□□ -0.4
FN1-209ENST00000432072 VPS37DQ86XT2 251 aa12.55□□□□□ -0.4
FN1-209ENST00000432072 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
FN1-209ENST00000432072 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
FN1-209ENST00000432072 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
FN1-209ENST00000432072 WASHC2AQ641Q2 1341 aa12.55□□□□□ -0.4
FN1-209ENST00000432072 EVC2Q86UK5 1308 aa12.54□□□□□ -0.4
FN1-209ENST00000432072 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
FN1-209ENST00000432072 TCEAL9Q9UHQ7 104 aa12.54□□□□□ -0.4
FN1-209ENST00000432072 ARHGAP5Q13017 1502 aa12.54□□□□□ -0.4
FN1-209ENST00000432072 CCDC144AA2RUR9 1427 aa12.53□□□□□ -0.4
FN1-209ENST00000432072 NRDCO43847 1150 aa12.53□□□□□ -0.4
FN1-209ENST00000432072 KIAA2012Q0VF49 1180 aa12.53□□□□□ -0.4
FN1-209ENST00000432072 MINK1Q8N4C8 1332 aaPredicted RBP12.52□□□□□ -0.4
FN1-209ENST00000432072 MARCH6O60337 910 aa12.52□□□□□ -0.4
FN1-209ENST00000432072 RAD21O60216 631 aa12.52□□□□□ -0.41
FN1-209ENST00000432072 MIER1Q8N108 512 aa12.52□□□□□ -0.41
FN1-209ENST00000432072 TOMM22Q9NS69 142 aa12.52□□□□□ -0.41
FN1-209ENST00000432072 ITPRIPQ8IWB1 547 aa12.51□□□□□ -0.41
FN1-209ENST00000432072 DNTTIP2Q5QJE6 756 aaKnown RBP12.51□□□□□ -0.41
FN1-209ENST00000432072 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
FN1-209ENST00000432072 RBM33Q96EV2 1170 aaKnown RBP12.5□□□□□ -0.41
FN1-209ENST00000432072 SUPT16HQ9Y5B9 1047 aaKnown RBP12.5□□□□□ -0.41
FN1-209ENST00000432072 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
FN1-209ENST00000432072 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
FN1-209ENST00000432072 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
FN1-209ENST00000432072 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
FN1-209ENST00000432072 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
FN1-209ENST00000432072 HMMRO75330 724 aa12.49□□□□□ -0.41
FN1-209ENST00000432072 HSP90B1P14625 803 aaKnown RBP12.49□□□□□ -0.41
FN1-209ENST00000432072 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
FN1-209ENST00000432072 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
FN1-209ENST00000432072 RASSF8Q8NHQ8 419 aa12.48□□□□□ -0.41
FN1-209ENST00000432072 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
FN1-209ENST00000432072 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
FN1-209ENST00000432072 SMC4Q9NTJ3 1288 aa12.47□□□□□ -0.41
FN1-209ENST00000432072 POGZQ7Z3K3 1410 aa12.47□□□□□ -0.41
FN1-209ENST00000432072 HSCBQ8IWL3 235 aa12.46□□□□□ -0.41
FN1-209ENST00000432072 CFAP65Q6ZU64 1925 aaKnown RBP12.46□□□□□ -0.41
FN1-209ENST00000432072 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.42
FN1-209ENST00000432072 STRN4Q9NRL3 753 aa12.46□□□□□ -0.42
FN1-209ENST00000432072 CGNL1Q0VF96 1302 aa12.46□□□□□ -0.42
FN1-209ENST00000432072 GPRASP1Q5JY77 1395 aa12.46□□□□□ -0.42
FN1-209ENST00000432072 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
FN1-209ENST00000432072 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
FN1-209ENST00000432072 ESCO1Q5FWF5 840 aa12.45□□□□□ -0.42
FN1-209ENST00000432072 AQRO60306 1485 aaKnown RBP eCLIP12.45□□□□□ -0.429e-12■■■■■ 26.9
FN1-209ENST00000432072 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
FN1-209ENST00000432072 THEMISQ8N1K5 641 aaPredicted RBP12.45□□□□□ -0.42
FN1-209ENST00000432072 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
FN1-209ENST00000432072 CCAR1Q8IX12 1150 aaKnown RBP12.45□□□□□ -0.42
FN1-209ENST00000432072 CCDC34Q96HJ3 373 aa12.45□□□□□ -0.42
FN1-209ENST00000432072 RALBP1Q15311 655 aa12.44□□□□□ -0.42
FN1-209ENST00000432072 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
FN1-209ENST00000432072 KANK4Q5T7N3 995 aaPredicted RBP12.44□□□□□ -0.42
FN1-209ENST00000432072 LRRFIP1Q32MZ4 808 aaKnown RBP12.44□□□□□ -0.42
FN1-209ENST00000432072 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
FN1-209ENST00000432072 EIF2S2P20042 333 aaKnown RBP12.43□□□□□ -0.42
FN1-209ENST00000432072 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
FN1-209ENST00000432072 C9orf78Q9NZ63 289 aaPredicted RBP12.43□□□□□ -0.42
FN1-209ENST00000432072 NUTM2GQ5VZR2 741 aa12.42□□□□□ -0.42
FN1-209ENST00000432072 DRC7Q8IY82 874 aa12.42□□□□□ -0.42
FN1-209ENST00000432072 GRIN2BQ13224 1484 aa12.42□□□□□ -0.42
FN1-209ENST00000432072 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
FN1-209ENST00000432072 DHX57Q6P158 1386 aaKnown RBP12.41□□□□□ -0.42
FN1-209ENST00000432072 CCDC146Q8IYE0 955 aa12.41□□□□□ -0.42
FN1-209ENST00000432072 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
FN1-209ENST00000432072 ANKLE2Q86XL3 938 aa12.41□□□□□ -0.42
FN1-209ENST00000432072 TIMELESSQ9UNS1 1208 aa12.41□□□□□ -0.42
FN1-209ENST00000432072 SYNJ2O15056 1496 aa12.41□□□□□ -0.42
FN1-209ENST00000432072 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
FN1-209ENST00000432072 AKAP17AQ02040 695 aaKnown RBP12.41□□□□□ -0.42
FN1-209ENST00000432072 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.42
FN1-209ENST00000432072 RAB3GAP2Q9H2M9 1393 aa12.39□□□□□ -0.43
FN1-209ENST00000432072 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
FN1-209ENST00000432072 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
FN1-209ENST00000432072 MIA2Q96PC5 1412 aa12.38□□□□□ -0.43
FN1-209ENST00000432072 NECTIN2Q92692 538 aa12.38□□□□□ -0.43
FN1-209ENST00000432072 RWDD1Q9H446 243 aaPredicted RBP12.37□□□□□ -0.43
FN1-209ENST00000432072 NOC3LQ8WTT2 800 aaKnown RBP12.37□□□□□ -0.43
FN1-209ENST00000432072 SMG6Q86US8 1419 aaKnown RBP12.36□□□□□ -0.43
FN1-209ENST00000432072 APPP05067 770 aa12.36□□□□□ -0.43
FN1-209ENST00000432072 KIF6Q6ZMV9 814 aa12.36□□□□□ -0.43
FN1-209ENST00000432072 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
FN1-209ENST00000432072 CREBRFQ8IUR6 639 aa12.36□□□□□ -0.43
FN1-209ENST00000432072 DHX16O60231 1041 aaKnown RBP12.36□□□□□ -0.43
FN1-209ENST00000432072 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
FN1-209ENST00000432072 CEP89Q96ST8 783 aa12.35□□□□□ -0.43
FN1-209ENST00000432072 NLRP6P59044 892 aa12.35□□□□□ -0.43
FN1-209ENST00000432072 CUX1P39880 1505 aa12.35□□□□□ -0.43
FN1-209ENST00000432072 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
FN1-209ENST00000432072 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
FN1-209ENST00000432072 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
FN1-209ENST00000432072 PDE4CQ08493 712 aa12.34□□□□□ -0.43
FN1-209ENST00000432072 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
FN1-209ENST00000432072 TPM4P67936 248 aa12.33□□□□□ -0.44
FN1-209ENST00000432072 CCDC43Q96MW1 224 aaKnown RBP12.33□□□□□ -0.44
FN1-209ENST00000432072 RIC3Q7Z5B4 369 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms