RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
DDX56-204ENST00000431640 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
DDX56-204ENST00000431640 MAGI2Q86UL8 1455 aa18.32■□□□□ 0.52
DDX56-204ENST00000431640 MROH1Q8NDA8 1641 aa18.32■□□□□ 0.52
DDX56-204ENST00000431640 ERBINQ96RT1 1412 aa18.32■□□□□ 0.52
DDX56-204ENST00000431640 MPHOSPH9Q99550 1183 aa18.31■□□□□ 0.52
DDX56-204ENST00000431640 UNC13BO14795 1591 aa18.31■□□□□ 0.52
DDX56-204ENST00000431640 A2MP01023 1474 aa18.31■□□□□ 0.52
DDX56-204ENST00000431640 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
DDX56-204ENST00000431640 DEPDC5O75140 1603 aa18.3■□□□□ 0.52
DDX56-204ENST00000431640 BCORL1Q5H9F3 1711 aa18.3■□□□□ 0.52
DDX56-204ENST00000431640 REREQ9P2R6 1566 aa18.29■□□□□ 0.52
DDX56-204ENST00000431640 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.52
DDX56-204ENST00000431640 RNF17Q9BXT8 1623 aaKnown RBP18.27■□□□□ 0.51
DDX56-204ENST00000431640 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
DDX56-204ENST00000431640 KDM5DQ9BY66 1539 aa18.25■□□□□ 0.51
DDX56-204ENST00000431640 PZPP20742 1482 aa18.25■□□□□ 0.51
DDX56-204ENST00000431640 ATP10AO60312 1499 aa18.24■□□□□ 0.51
DDX56-204ENST00000431640 PRDM15P57071 1507 aaPredicted RBP18.24■□□□□ 0.51
DDX56-204ENST00000431640 VWDEQ8N2E2 1590 aa18.22■□□□□ 0.51
DDX56-204ENST00000431640 IQGAP3Q86VI3 1631 aa18.22■□□□□ 0.51
DDX56-204ENST00000431640 AGLP35573 1532 aa18.2■□□□□ 0.5
DDX56-204ENST00000431640 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
DDX56-204ENST00000431640 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
DDX56-204ENST00000431640 CEP152O94986 1710 aa18.18■□□□□ 0.5
DDX56-204ENST00000431640 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
DDX56-204ENST00000431640 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
DDX56-204ENST00000431640 KIF3BO15066 747 aa18.16■□□□□ 0.5
DDX56-204ENST00000431640 YTHDC1Q96MU7 727 aaKnown RBP18.15■□□□□ 0.5
DDX56-204ENST00000431640 NUP155O75694 1391 aa18.14■□□□□ 0.49
DDX56-204ENST00000431640 RPRD2Q5VT52 1461 aaKnown RBP18.13■□□□□ 0.49
DDX56-204ENST00000431640 ABCC3O15438 1527 aa18.13■□□□□ 0.49
DDX56-204ENST00000431640 E9PCH4 1651 aa18.12■□□□□ 0.49
DDX56-204ENST00000431640 TET3O43151 1660 aa18.12■□□□□ 0.49
DDX56-204ENST00000431640 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
DDX56-204ENST00000431640 LMTK2Q8IWU2 1503 aa18.1■□□□□ 0.49
DDX56-204ENST00000431640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■■□□□ 11.7
DDX56-204ENST00000431640 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
DDX56-204ENST00000431640 ZC3H13Q5T200 1668 aaKnown RBP18.09■□□□□ 0.49
DDX56-204ENST00000431640 EFCAB6Q5THR3 1501 aa18.09■□□□□ 0.49
DDX56-204ENST00000431640 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
DDX56-204ENST00000431640 FOXD1Q16676 465 aa18.08■□□□□ 0.48
DDX56-204ENST00000431640 GGT6Q6P531 493 aa18.07■□□□□ 0.48
DDX56-204ENST00000431640 CLTCQ00610 1675 aaKnown RBP18.07■□□□□ 0.48
DDX56-204ENST00000431640 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDX56-204ENST00000431640 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
DDX56-204ENST00000431640 PKD2Q13563 968 aa18.03■□□□□ 0.48
DDX56-204ENST00000431640 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
DDX56-204ENST00000431640 PLA2R1Q13018 1463 aa18.03■□□□□ 0.48
DDX56-204ENST00000431640 KANK1Q14678 1352 aa18.02■□□□□ 0.47
DDX56-204ENST00000431640 NPATQ14207 1427 aa18.01■□□□□ 0.47
DDX56-204ENST00000431640 MLECQ14165 292 aa18.01■□□□□ 0.47
DDX56-204ENST00000431640 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
DDX56-204ENST00000431640 ANP32CO43423 234 aa18■□□□□ 0.47
DDX56-204ENST00000431640 FER1L4A9Z1Z3 1794 aa18■□□□□ 0.47
DDX56-204ENST00000431640 CCER2I3L3R5 266 aa18■□□□□ 0.47
DDX56-204ENST00000431640 MADDQ8WXG6 1647 aa17.99■□□□□ 0.47
DDX56-204ENST00000431640 HSPA5P11021 654 aaKnown RBP17.99■□□□□ 0.47
DDX56-204ENST00000431640 ADAMTSL3P82987 1691 aa17.99■□□□□ 0.47
DDX56-204ENST00000431640 ARID4BQ4LE39 1312 aaPredicted RBP17.98■□□□□ 0.47
DDX56-204ENST00000431640 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
DDX56-204ENST00000431640 MROH2AA6NES4 1674 aa17.97■□□□□ 0.47
DDX56-204ENST00000431640 PREX1Q8TCU6 1659 aa17.97■□□□□ 0.47
DDX56-204ENST00000431640 WASHC2CQ9Y4E1 1318 aa17.96■□□□□ 0.47
DDX56-204ENST00000431640 TRPM2O94759 1503 aa17.96■□□□□ 0.47
DDX56-204ENST00000431640 SYNMO15061 1565 aa17.96■□□□□ 0.47
DDX56-204ENST00000431640 CLTCL1P53675 1640 aa17.96■□□□□ 0.47
DDX56-204ENST00000431640 PTPRTO14522 1441 aa17.95■□□□□ 0.46
DDX56-204ENST00000431640 ARHGAP31Q2M1Z3 1444 aa17.95■□□□□ 0.46
DDX56-204ENST00000431640 RIMS1Q86UR5 1692 aaKnown RBP17.94■□□□□ 0.46
DDX56-204ENST00000431640 C3P01024 1663 aa17.93■□□□□ 0.46
DDX56-204ENST00000431640 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
DDX56-204ENST00000431640 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
DDX56-204ENST00000431640 NOS1P29475 1434 aa17.92■□□□□ 0.46
DDX56-204ENST00000431640 ERVK-7P63135 1459 aa17.91■□□□□ 0.46
DDX56-204ENST00000431640 PIK3C2BO00750 1634 aa17.91■□□□□ 0.46
DDX56-204ENST00000431640 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
DDX56-204ENST00000431640 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
DDX56-204ENST00000431640 WASHC2AQ641Q2 1341 aa17.89■□□□□ 0.45
DDX56-204ENST00000431640 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
DDX56-204ENST00000431640 ZMYM3Q14202 1370 aa17.87■□□□□ 0.45
DDX56-204ENST00000431640 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
DDX56-204ENST00000431640 FBXO31Q5XUX0 539 aaPredicted RBP17.87■□□□□ 0.45
DDX56-204ENST00000431640 SPATA31E1Q6ZUB1 1445 aa17.86■□□□□ 0.45
DDX56-204ENST00000431640 CCDC144AA2RUR9 1427 aa17.84■□□□□ 0.45
DDX56-204ENST00000431640 CCDC7Q96M83 1385 aa17.84■□□□□ 0.45
DDX56-204ENST00000431640 ADGRB3O60242 1522 aa17.83■□□□□ 0.44
DDX56-204ENST00000431640 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
DDX56-204ENST00000431640 MYO5BQ9ULV0 1848 aa17.81■□□□□ 0.44
DDX56-204ENST00000431640 POLR1AO95602 1720 aaPredicted RBP17.81■□□□□ 0.44
DDX56-204ENST00000431640 KIF1BO60333 1816 aa17.79■□□□□ 0.44
DDX56-204ENST00000431640 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
DDX56-204ENST00000431640 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
DDX56-204ENST00000431640 MYO3AQ8NEV4 1616 aa17.78■□□□□ 0.44
DDX56-204ENST00000431640 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
DDX56-204ENST00000431640 PTPRMP28827 1452 aa17.77■□□□□ 0.44
DDX56-204ENST00000431640 NEURL4Q96JN8 1562 aa17.77■□□□□ 0.44
DDX56-204ENST00000431640 ESF1Q9H501 851 aaKnown RBP17.77■□□□□ 0.44
DDX56-204ENST00000431640 C11orf95C9JLR9 678 aaPredicted RBP17.76■□□□□ 0.43
DDX56-204ENST00000431640 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms