RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 KIDINS220Q9ULH0 1771 aa23.57■■□□□ 1.36
USHBP1-203ENST00000431146 EIF4G2P78344 907 aaKnown RBP eCLIP23.56■■□□□ 1.36
USHBP1-203ENST00000431146 ZNF518AQ6AHZ1 1483 aa23.56■■□□□ 1.36
USHBP1-203ENST00000431146 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
USHBP1-203ENST00000431146 CCDC144AA2RUR9 1427 aa23.54■■□□□ 1.36
USHBP1-203ENST00000431146 KIF3BO15066 747 aa23.53■■□□□ 1.36
USHBP1-203ENST00000431146 KDM2AQ9Y2K7 1162 aa23.52■■□□□ 1.36
USHBP1-203ENST00000431146 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
USHBP1-203ENST00000431146 DEPDC5O75140 1603 aa23.51■■□□□ 1.35
USHBP1-203ENST00000431146 DHX29Q7Z478 1369 aaKnown RBP23.51■■□□□ 1.35
USHBP1-203ENST00000431146 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
USHBP1-203ENST00000431146 MAP3K4Q9Y6R4 1608 aa23.49■■□□□ 1.35
USHBP1-203ENST00000431146 E9PCH4 1651 aa23.48■■□□□ 1.35
USHBP1-203ENST00000431146 KDM5CP41229 1560 aa23.48■■□□□ 1.35
USHBP1-203ENST00000431146 RAPGEF3O95398 923 aa23.48■■□□□ 1.35
USHBP1-203ENST00000431146 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
USHBP1-203ENST00000431146 NEO1Q92859 1461 aa23.46■■□□□ 1.35
USHBP1-203ENST00000431146 WASHC2AQ641Q2 1341 aa23.46■■□□□ 1.35
USHBP1-203ENST00000431146 EIF2AK4Q9P2K8 1649 aaKnown RBP23.45■■□□□ 1.35
USHBP1-203ENST00000431146 HECW2Q9P2P5 1572 aa23.45■■□□□ 1.34
USHBP1-203ENST00000431146 UHRF1BP1Q6BDS2 1440 aa23.44■■□□□ 1.34
USHBP1-203ENST00000431146 MROH1Q8NDA8 1641 aa23.43■■□□□ 1.34
USHBP1-203ENST00000431146 C11orf95C9JLR9 678 aaPredicted RBP23.42■■□□□ 1.34
USHBP1-203ENST00000431146 FAM69CQ0P6D2 419 aa23.42■■□□□ 1.34
USHBP1-203ENST00000431146 KANK1Q14678 1352 aa23.42■■□□□ 1.34
USHBP1-203ENST00000431146 SPATA31E1Q6ZUB1 1445 aa23.42■■□□□ 1.34
USHBP1-203ENST00000431146 A2MP01023 1474 aa23.42■■□□□ 1.34
USHBP1-203ENST00000431146 ATP10AO60312 1499 aa23.42■■□□□ 1.34
USHBP1-203ENST00000431146 MLH3Q9UHC1 1453 aa23.42■■□□□ 1.34
USHBP1-203ENST00000431146 VWDEQ8N2E2 1590 aa23.41■■□□□ 1.34
USHBP1-203ENST00000431146 TET3O43151 1660 aa23.41■■□□□ 1.34
USHBP1-203ENST00000431146 GLI2P10070 1586 aa23.41■■□□□ 1.34
USHBP1-203ENST00000431146 PRDM15P57071 1507 aaPredicted RBP23.41■■□□□ 1.34
USHBP1-203ENST00000431146 CENPBP07199 599 aaPredicted RBP23.41■■□□□ 1.34
USHBP1-203ENST00000431146 ABCA6Q8N139 1617 aa23.4■■□□□ 1.34
USHBP1-203ENST00000431146 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
USHBP1-203ENST00000431146 TSPOAP1O95153 1857 aa23.39■■□□□ 1.34
USHBP1-203ENST00000431146 FRMPD1Q5SYB0 1578 aa23.39■■□□□ 1.33
USHBP1-203ENST00000431146 RALGAPBQ86X10 1494 aa23.39■■□□□ 1.33
USHBP1-203ENST00000431146 SPHKAPQ2M3C7 1700 aa23.38■■□□□ 1.33
USHBP1-203ENST00000431146 USP47Q96K76 1375 aa23.37■■□□□ 1.33
USHBP1-203ENST00000431146 RICTORQ6R327 1708 aa23.37■■□□□ 1.33
USHBP1-203ENST00000431146 CARD11Q9BXL7 1154 aa23.35■■□□□ 1.33
USHBP1-203ENST00000431146 CEP152O94986 1710 aa23.34■■□□□ 1.33
USHBP1-203ENST00000431146 TRPM2O94759 1503 aa23.34■■□□□ 1.33
USHBP1-203ENST00000431146 CCDC7Q96M83 1385 aa23.33■■□□□ 1.33
USHBP1-203ENST00000431146 PRAG1Q86YV5 1406 aa23.33■■□□□ 1.33
USHBP1-203ENST00000431146 GGT6Q6P531 493 aa23.33■■□□□ 1.32
USHBP1-203ENST00000431146 CLTCL1P53675 1640 aa23.33■■□□□ 1.32
USHBP1-203ENST00000431146 RNF17Q9BXT8 1623 aaKnown RBP23.32■■□□□ 1.32
USHBP1-203ENST00000431146 ANP32CO43423 234 aa23.32■■□□□ 1.32
USHBP1-203ENST00000431146 PTPRTO14522 1441 aa23.32■■□□□ 1.32
USHBP1-203ENST00000431146 BCORL1Q5H9F3 1711 aa23.3■■□□□ 1.32
USHBP1-203ENST00000431146 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
USHBP1-203ENST00000431146 PPRC1Q5VV67 1664 aaKnown RBP23.3■■□□□ 1.32
USHBP1-203ENST00000431146 POLR1AO95602 1720 aaPredicted RBP23.3■■□□□ 1.32
USHBP1-203ENST00000431146 DIP2CQ9Y2E4 1556 aa23.3■■□□□ 1.32
USHBP1-203ENST00000431146 KIF7Q2M1P5 1343 aa23.3■■□□□ 1.32
USHBP1-203ENST00000431146 ROCK2O75116 1388 aaKnown RBP23.29■■□□□ 1.32
USHBP1-203ENST00000431146 EFCAB6Q5THR3 1501 aa23.29■■□□□ 1.32
USHBP1-203ENST00000431146 YEATS2Q9ULM3 1422 aa23.28■■□□□ 1.32
USHBP1-203ENST00000431146 CFAP65Q6ZU64 1925 aaKnown RBP23.28■■□□□ 1.32
USHBP1-203ENST00000431146 NBPF1Q3BBV0 1214 aa23.27■■□□□ 1.32
USHBP1-203ENST00000431146 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
USHBP1-203ENST00000431146 CNTLNQ9NXG0 1405 aa23.24■■□□□ 1.31
USHBP1-203ENST00000431146 POLR3GLQ9BT43 218 aa23.23■■□□□ 1.31
USHBP1-203ENST00000431146 LMTK2Q8IWU2 1503 aa23.23■■□□□ 1.31
USHBP1-203ENST00000431146 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
USHBP1-203ENST00000431146 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
USHBP1-203ENST00000431146 KIF13AQ9H1H9 1805 aa23.21■■□□□ 1.31
USHBP1-203ENST00000431146 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.31
USHBP1-203ENST00000431146 NPATQ14207 1427 aa23.18■■□□□ 1.3
USHBP1-203ENST00000431146 ABCC3O15438 1527 aa23.18■■□□□ 1.3
USHBP1-203ENST00000431146 KIF1BO60333 1816 aa23.16■■□□□ 1.3
USHBP1-203ENST00000431146 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
USHBP1-203ENST00000431146 CCER2I3L3R5 266 aa23.15■■□□□ 1.3
USHBP1-203ENST00000431146 ZMYM4Q5VZL5 1548 aa23.15■■□□□ 1.3
USHBP1-203ENST00000431146 GPRASP1Q5JY77 1395 aa23.14■■□□□ 1.3
USHBP1-203ENST00000431146 CAMSAP1Q5T5Y3 1602 aa23.14■■□□□ 1.3
USHBP1-203ENST00000431146 MROH2AA6NES4 1674 aa23.14■■□□□ 1.29
USHBP1-203ENST00000431146 LAMC1P11047 1609 aa23.11■■□□□ 1.29
USHBP1-203ENST00000431146 SIGLEC1Q9BZZ2 1709 aa23.11■■□□□ 1.29
USHBP1-203ENST00000431146 CHGAP10645 457 aaKnown RBP23.1■■□□□ 1.29
USHBP1-203ENST00000431146 COL17A1Q9UMD9 1497 aaPredicted RBP23.07■■□□□ 1.28
USHBP1-203ENST00000431146 NEURL4Q96JN8 1562 aa23.07■■□□□ 1.28
USHBP1-203ENST00000431146 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
USHBP1-203ENST00000431146 GTF3C3Q9Y5Q9 886 aa23.06■■□□□ 1.28
USHBP1-203ENST00000431146 CNGB1Q14028 1251 aaPredicted RBP23.06■■□□□ 1.28
USHBP1-203ENST00000431146 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
USHBP1-203ENST00000431146 IFT172Q9UG01 1749 aa23.04■■□□□ 1.28
USHBP1-203ENST00000431146 ZC3H13Q5T200 1668 aaKnown RBP23.04■■□□□ 1.28
USHBP1-203ENST00000431146 ADGRF5Q8IZF2 1346 aa23.04■■□□□ 1.28
USHBP1-203ENST00000431146 ADGRB3O60242 1522 aa23.04■■□□□ 1.28
USHBP1-203ENST00000431146 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
USHBP1-203ENST00000431146 SYNMO15061 1565 aa23.02■■□□□ 1.28
USHBP1-203ENST00000431146 NOS1P29475 1434 aa23.01■■□□□ 1.27
USHBP1-203ENST00000431146 TESK2Q96S53 571 aa23.01■■□□□ 1.27
USHBP1-203ENST00000431146 CCDC184Q52MB2 194 aa23■■□□□ 1.27
USHBP1-203ENST00000431146 IQGAP1P46940 1657 aa23■■□□□ 1.27
USHBP1-203ENST00000431146 MYOM2P54296 1465 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms