RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 PLCH2O75038 1416 aa13□□□□□ -0.33
ECHDC1-207ENST00000430841 PHF12Q96QT6 1004 aa13□□□□□ -0.33
ECHDC1-207ENST00000430841 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
ECHDC1-207ENST00000430841 FMN1Q68DA7 1419 aa12.98□□□□□ -0.33
ECHDC1-207ENST00000430841 POTEGQ6S5H5 508 aa12.97□□□□□ -0.33
ECHDC1-207ENST00000430841 SOCS7O14512 581 aa12.96□□□□□ -0.33
ECHDC1-207ENST00000430841 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-207ENST00000430841 CEBPAP49715 358 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-207ENST00000430841 LCE2DQ5TA82 110 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-207ENST00000430841 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-207ENST00000430841 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
ECHDC1-207ENST00000430841 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
ECHDC1-207ENST00000430841 KDM5CP41229 1560 aa12.91□□□□□ -0.34
ECHDC1-207ENST00000430841 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
ECHDC1-207ENST00000430841 C3P01024 1663 aa12.9□□□□□ -0.34
ECHDC1-207ENST00000430841 PTPRTO14522 1441 aa12.9□□□□□ -0.34
ECHDC1-207ENST00000430841 TROQ12816 1431 aaPredicted RBP12.9□□□□□ -0.34
ECHDC1-207ENST00000430841 REREQ9P2R6 1566 aa12.9□□□□□ -0.35
ECHDC1-207ENST00000430841 CNTLNQ9NXG0 1405 aa12.89□□□□□ -0.35
ECHDC1-207ENST00000430841 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
ECHDC1-207ENST00000430841 ILDR2Q71H61 639 aa12.88□□□□□ -0.35
ECHDC1-207ENST00000430841 AFAP1Q8N556 730 aa12.88□□□□□ -0.35
ECHDC1-207ENST00000430841 IQSEC2Q5JU85 1478 aa12.88□□□□□ -0.35
ECHDC1-207ENST00000430841 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
ECHDC1-207ENST00000430841 PREX2Q70Z35 1606 aa12.86□□□□□ -0.35
ECHDC1-207ENST00000430841 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
ECHDC1-207ENST00000430841 MLH3Q9UHC1 1453 aa12.85□□□□□ -0.35
ECHDC1-207ENST00000430841 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-207ENST00000430841 AGLP35573 1532 aa12.85□□□□□ -0.35
ECHDC1-207ENST00000430841 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
ECHDC1-207ENST00000430841 ABCC1P33527 1531 aa12.84□□□□□ -0.35
ECHDC1-207ENST00000430841 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
ECHDC1-207ENST00000430841 NCOA1Q15788 1441 aa12.83□□□□□ -0.36
ECHDC1-207ENST00000430841 CAMSAP1Q5T5Y3 1602 aa12.83□□□□□ -0.36
ECHDC1-207ENST00000430841 MROH2AA6NES4 1674 aa12.83□□□□□ -0.36
ECHDC1-207ENST00000430841 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
ECHDC1-207ENST00000430841 ASTLQ6HA08 431 aaPredicted RBP12.82□□□□□ -0.36
ECHDC1-207ENST00000430841 ARHGAP35Q9NRY4 1499 aa12.82□□□□□ -0.36
ECHDC1-207ENST00000430841 NPATQ14207 1427 aa12.81□□□□□ -0.36
ECHDC1-207ENST00000430841 ZNF777Q9ULD5 760 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-207ENST00000430841 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
ECHDC1-207ENST00000430841 MS4A3Q96HJ5 214 aa12.79□□□□□ -0.36
ECHDC1-207ENST00000430841 LTBP4Q8N2S1 1624 aa12.79□□□□□ -0.36
ECHDC1-207ENST00000430841 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
ECHDC1-207ENST00000430841 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-207ENST00000430841 KIDINS220Q9ULH0 1771 aa12.78□□□□□ -0.36
ECHDC1-207ENST00000430841 MYO3AQ8NEV4 1616 aa12.77□□□□□ -0.36
ECHDC1-207ENST00000430841 LRRIQ1Q96JM4 1722 aa12.77□□□□□ -0.36
ECHDC1-207ENST00000430841 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.37
ECHDC1-207ENST00000430841 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
ECHDC1-207ENST00000430841 PKD2Q13563 968 aa12.76□□□□□ -0.37
ECHDC1-207ENST00000430841 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
ECHDC1-207ENST00000430841 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
ECHDC1-207ENST00000430841 ZNF142P52746 1687 aaPredicted RBP12.76□□□□□ -0.37
ECHDC1-207ENST00000430841 PLEKHH2Q8IVE3 1493 aa12.75□□□□□ -0.37
ECHDC1-207ENST00000430841 SAMD9LQ8IVG5 1584 aa12.75□□□□□ -0.37
ECHDC1-207ENST00000430841 CEP170BQ9Y4F5 1589 aaPredicted RBP12.75□□□□□ -0.37
ECHDC1-207ENST00000430841 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
ECHDC1-207ENST00000430841 CASKIN1Q8WXD9 1431 aa12.74□□□□□ -0.37
ECHDC1-207ENST00000430841 ZMYM3Q14202 1370 aa12.74□□□□□ -0.37
ECHDC1-207ENST00000430841 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
ECHDC1-207ENST00000430841 NCKAP5LQ9HCH0 1330 aa12.74□□□□□ -0.37
ECHDC1-207ENST00000430841 PLA2R1Q13018 1463 aa12.73□□□□□ -0.37
ECHDC1-207ENST00000430841 FYCO1Q9BQS8 1478 aa12.73□□□□□ -0.37
ECHDC1-207ENST00000430841 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
ECHDC1-207ENST00000430841 GGT6Q6P531 493 aa12.72□□□□□ -0.37
ECHDC1-207ENST00000430841 A2MP01023 1474 aa12.72□□□□□ -0.37
ECHDC1-207ENST00000430841 CCNB3Q8WWL7 1395 aa12.7□□□□□ -0.38
ECHDC1-207ENST00000430841 PIP4K2BP78356 416 aa12.7□□□□□ -0.38
ECHDC1-207ENST00000430841 CFDP1Q9UEE9 299 aaPredicted RBP12.7□□□□□ -0.38
ECHDC1-207ENST00000430841 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
ECHDC1-207ENST00000430841 INO80Q9ULG1 1556 aaPredicted RBP12.69□□□□□ -0.38
ECHDC1-207ENST00000430841 TOM1O60784 492 aa12.69□□□□□ -0.38
ECHDC1-207ENST00000430841 POLR1AO95602 1720 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-207ENST00000430841 C7P10643 843 aa12.68□□□□□ -0.38
ECHDC1-207ENST00000430841 HNRNPMP52272 730 aaKnown RBP eCLIP12.68□□□□□ -0.383e-8■■■■■ 29
ECHDC1-207ENST00000430841 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
ECHDC1-207ENST00000430841 MTUS2Q5JR59 1369 aa12.68□□□□□ -0.38
ECHDC1-207ENST00000430841 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
ECHDC1-207ENST00000430841 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
ECHDC1-207ENST00000430841 SLC39A7Q92504 469 aa12.67□□□□□ -0.38
ECHDC1-207ENST00000430841 PLXNC1O60486 1568 aa12.67□□□□□ -0.38
ECHDC1-207ENST00000430841 CPS1P31327 1500 aa12.67□□□□□ -0.38
ECHDC1-207ENST00000430841 A2ML1A8K2U0 1454 aa12.66□□□□□ -0.38
ECHDC1-207ENST00000430841 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-207ENST00000430841 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
ECHDC1-207ENST00000430841 PTPRKQ15262 1439 aa12.66□□□□□ -0.38
ECHDC1-207ENST00000430841 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
ECHDC1-207ENST00000430841 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
ECHDC1-207ENST00000430841 GPATCH8Q9UKJ3 1502 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-207ENST00000430841 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
ECHDC1-207ENST00000430841 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
ECHDC1-207ENST00000430841 DNMT1P26358 1616 aaKnown RBP12.62□□□□□ -0.39
ECHDC1-207ENST00000430841 TNRQ92752 1358 aa12.62□□□□□ -0.39
ECHDC1-207ENST00000430841 HSPA1LP34931 641 aa12.62□□□□□ -0.39
ECHDC1-207ENST00000430841 ANKLE2Q86XL3 938 aa12.61□□□□□ -0.39
ECHDC1-207ENST00000430841 KDM5DQ9BY66 1539 aa12.61□□□□□ -0.39
ECHDC1-207ENST00000430841 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
ECHDC1-207ENST00000430841 FAM135AQ9P2D6 1515 aa12.6□□□□□ -0.39
ECHDC1-207ENST00000430841 EHBP1L1Q8N3D4 1523 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms