RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 CLEC11AQ9Y240 323 aa5.71□□□□□ -1.5
LRRK2-204ENST00000430804 SALL2Q9Y467 1007 aaPredicted RBP5.71□□□□□ -1.5
LRRK2-204ENST00000430804 PPP4R2Q9NY27 417 aa5.71□□□□□ -1.5
LRRK2-204ENST00000430804 FMN1Q68DA7 1419 aa5.71□□□□□ -1.5
LRRK2-204ENST00000430804 LRPPRCP42704 1394 aaKnown RBP5.7□□□□□ -1.5
LRRK2-204ENST00000430804 PRDM11Q9NQV5 511 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 GOLGA6L6A8MZA4 724 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 MCCP23508 829 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 DCAF11Q8TEB1 546 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 AIDAQ96BJ3 306 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 CEP89Q96ST8 783 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 RFX1P22670 979 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 ZRANB1Q9UGI0 708 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 DDX58O95786 925 aaKnown RBP5.7□□□□□ -1.5
LRRK2-204ENST00000430804 NRDCO43847 1150 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 BAG6P46379 1132 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 CHMP4CQ96CF2 233 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 USP35Q9P2H5 1018 aa5.7□□□□□ -1.5
LRRK2-204ENST00000430804 TOM1L2Q6ZVM7 507 aa5.69□□□□□ -1.5
LRRK2-204ENST00000430804 TOMM22Q9NS69 142 aa5.69□□□□□ -1.5
LRRK2-204ENST00000430804 NF2P35240 595 aa5.69□□□□□ -1.5
LRRK2-204ENST00000430804 IPO8O15397 1037 aaKnown RBP5.69□□□□□ -1.5
LRRK2-204ENST00000430804 ARHGEF6Q15052 776 aa5.69□□□□□ -1.5
LRRK2-204ENST00000430804 KIAA1211Q6ZU35 1233 aa5.69□□□□□ -1.5
LRRK2-204ENST00000430804 CCDC18Q5T9S5 1454 aa5.69□□□□□ -1.5
LRRK2-204ENST00000430804 TRIM44Q96DX7 344 aaPredicted RBP5.69□□□□□ -1.5
LRRK2-204ENST00000430804 FANCD2Q9BXW9 1451 aa5.68□□□□□ -1.5
LRRK2-204ENST00000430804 GOLGA6L22H0YM25 854 aa5.68□□□□□ -1.5
LRRK2-204ENST00000430804 KIF6Q6ZMV9 814 aa5.68□□□□□ -1.5
LRRK2-204ENST00000430804 RASSF8Q8NHQ8 419 aa5.68□□□□□ -1.5
LRRK2-204ENST00000430804 TATP17735 454 aaPredicted RBP5.68□□□□□ -1.5
LRRK2-204ENST00000430804 FAM9BQ8IZU0 186 aa5.68□□□□□ -1.5
LRRK2-204ENST00000430804 SMG6Q86US8 1419 aaKnown RBP5.67□□□□□ -1.5
LRRK2-204ENST00000430804 PAF1Q8N7H5 531 aa5.67□□□□□ -1.5
LRRK2-204ENST00000430804 TNIKQ9UKE5 1360 aa5.67□□□□□ -1.5
LRRK2-204ENST00000430804 C11orf95C9JLR9 678 aaPredicted RBP5.67□□□□□ -1.5
LRRK2-204ENST00000430804 ADAMTS2O95450 1211 aa5.67□□□□□ -1.5
LRRK2-204ENST00000430804 CRBNQ96SW2 442 aa5.67□□□□□ -1.5
LRRK2-204ENST00000430804 EVC2Q86UK5 1308 aa5.67□□□□□ -1.5
LRRK2-204ENST00000430804 DHX16O60231 1041 aaKnown RBP5.67□□□□□ -1.5
LRRK2-204ENST00000430804 HSP90AB1P08238 724 aaKnown RBP5.67□□□□□ -1.5
LRRK2-204ENST00000430804 NLRP13Q86W25 1043 aa5.67□□□□□ -1.5
LRRK2-204ENST00000430804 RBM42Q9BTD8 480 aaKnown RBP5.67□□□□□ -1.5
LRRK2-204ENST00000430804 STK32BQ9NY57 414 aa5.67□□□□□ -1.5
LRRK2-204ENST00000430804 ANP32AP39687 249 aaKnown RBP5.66□□□□□ -1.5
LRRK2-204ENST00000430804 AKAP17AQ02040 695 aaKnown RBP5.66□□□□□ -1.5
LRRK2-204ENST00000430804 LMTK3Q96Q04 1460 aa5.66□□□□□ -1.5
LRRK2-204ENST00000430804 NUP155O75694 1391 aa5.66□□□□□ -1.5
LRRK2-204ENST00000430804 MRS2Q9HD23 443 aa5.66□□□□□ -1.5
LRRK2-204ENST00000430804 LMOD1P29536 600 aaPredicted RBP5.66□□□□□ -1.5
LRRK2-204ENST00000430804 GRM1Q13255 1194 aa5.66□□□□□ -1.5
LRRK2-204ENST00000430804 GPR162Q16538 588 aa5.66□□□□□ -1.5
LRRK2-204ENST00000430804 HMMRO75330 724 aa5.66□□□□□ -1.5
LRRK2-204ENST00000430804 SYNE3Q6ZMZ3 975 aa5.66□□□□□ -1.5
LRRK2-204ENST00000430804 GOLGA6L4A6NEF3 574 aa5.65□□□□□ -1.5
LRRK2-204ENST00000430804 ZPR1O75312 459 aa5.65□□□□□ -1.5
LRRK2-204ENST00000430804 ROCK1Q13464 1354 aa5.65□□□□□ -1.5
LRRK2-204ENST00000430804 CADPS2Q86UW7 1296 aa5.65□□□□□ -1.5
LRRK2-204ENST00000430804 ZNF652Q9Y2D9 606 aa5.65□□□□□ -1.5
LRRK2-204ENST00000430804 HTATSF1O43719 755 aaKnown RBP5.65□□□□□ -1.51
LRRK2-204ENST00000430804 TMEM132AQ24JP5 1023 aa5.65□□□□□ -1.51
LRRK2-204ENST00000430804 DHX57Q6P158 1386 aaKnown RBP5.65□□□□□ -1.51
LRRK2-204ENST00000430804 MRC2Q9UBG0 1479 aa5.65□□□□□ -1.51
LRRK2-204ENST00000430804 IKQ13123 557 aaPredicted RBP5.65□□□□□ -1.51
LRRK2-204ENST00000430804 SAMD1Q6SPF0 538 aaPredicted RBP5.65□□□□□ -1.51
LRRK2-204ENST00000430804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.65□□□□□ -1.51
LRRK2-204ENST00000430804 GNL3LQ9NVN8 582 aaKnown RBP5.65□□□□□ -1.51
LRRK2-204ENST00000430804 MSH6P52701 1360 aa5.65□□□□□ -1.51
LRRK2-204ENST00000430804 SSFA2P28290 1259 aa5.65□□□□□ -1.51
LRRK2-204ENST00000430804 DNAI2Q9GZS0 605 aa5.65□□□□□ -1.51
LRRK2-204ENST00000430804 SPG7Q9UQ90 795 aa5.65□□□□□ -1.51
LRRK2-204ENST00000430804 RBM5P52756 815 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRRK2-204ENST00000430804 MPHOSPH10O00566 681 aaKnown RBP5.64□□□□□ -1.51
LRRK2-204ENST00000430804 PKD2Q13563 968 aa5.64□□□□□ -1.51
LRRK2-204ENST00000430804 DISP3Q9P2K9 1392 aa5.64□□□□□ -1.51
LRRK2-204ENST00000430804 U2AF1L5P0DN76 240 aaPredicted RBP5.64□□□□□ -1.51
LRRK2-204ENST00000430804 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
LRRK2-204ENST00000430804 U2AF1Q01081 240 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRRK2-204ENST00000430804 AK7Q96M32 723 aa5.64□□□□□ -1.51
LRRK2-204ENST00000430804 BIN2Q9UBW5 565 aaPredicted RBP5.64□□□□□ -1.51
LRRK2-204ENST00000430804 TRIM21P19474 475 aaKnown RBP5.64□□□□□ -1.51
LRRK2-204ENST00000430804 STAC3Q96MF2 364 aa5.63□□□□□ -1.51
LRRK2-204ENST00000430804 PLEKHO1Q53GL0 409 aaPredicted RBP5.63□□□□□ -1.51
LRRK2-204ENST00000430804 NLRP6P59044 892 aa5.63□□□□□ -1.51
LRRK2-204ENST00000430804 KIF3AQ9Y496 699 aa5.63□□□□□ -1.51
LRRK2-204ENST00000430804 IFT140Q96RY7 1462 aa5.63□□□□□ -1.51
LRRK2-204ENST00000430804 ZNF772Q68DY9 489 aaPredicted RBP5.63□□□□□ -1.51
LRRK2-204ENST00000430804 ABTB2Q8N961 1025 aa5.63□□□□□ -1.51
LRRK2-204ENST00000430804 MPHOSPH6Q99547 160 aaKnown RBP5.63□□□□□ -1.51
LRRK2-204ENST00000430804 CABP2Q9NPB3 220 aa5.63□□□□□ -1.51
LRRK2-204ENST00000430804 AKNAQ7Z591 1439 aa5.62□□□□□ -1.51
LRRK2-204ENST00000430804 TEX14Q8IWB6 1497 aa5.62□□□□□ -1.51
LRRK2-204ENST00000430804 SLC3A2P08195 630 aaKnown RBP5.62□□□□□ -1.51
LRRK2-204ENST00000430804 PMFBP1Q8TBY8 1022 aa5.62□□□□□ -1.51
LRRK2-204ENST00000430804 PPM1FP49593 454 aaPredicted RBP5.62□□□□□ -1.51
LRRK2-204ENST00000430804 BECN1Q14457 450 aa5.62□□□□□ -1.51
LRRK2-204ENST00000430804 BCL2L13Q9BXK5 485 aa5.62□□□□□ -1.51
LRRK2-204ENST00000430804 RBM27Q9P2N5 1060 aaKnown RBP5.62□□□□□ -1.51
LRRK2-204ENST00000430804 MIA2Q96PC5 1412 aa5.61□□□□□ -1.51
LRRK2-204ENST00000430804 MYO1BO43795 1136 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms