RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 LTBP4Q8N2S1 1624 aa25.77■■□□□ 1.72
PTPRA-206ENST00000430705 CROCC2H7BZ55 1655 aa25.77■■□□□ 1.72
PTPRA-206ENST00000430705 KIF3BO15066 747 aa25.77■■□□□ 1.72
PTPRA-206ENST00000430705 MROH1Q8NDA8 1641 aa25.77■■□□□ 1.72
PTPRA-206ENST00000430705 DMRT2Q9Y5R5 561 aa25.76■■□□□ 1.71
PTPRA-206ENST00000430705 PZPP20742 1482 aa25.76■■□□□ 1.71
PTPRA-206ENST00000430705 EIF2AK4Q9P2K8 1649 aaKnown RBP25.75■■□□□ 1.71
PTPRA-206ENST00000430705 PLA2R1Q13018 1463 aa25.75■■□□□ 1.71
PTPRA-206ENST00000430705 DNMT1P26358 1616 aaKnown RBP25.74■■□□□ 1.71
PTPRA-206ENST00000430705 TCOF1Q13428 1488 aaKnown RBP25.74■■□□□ 1.71
PTPRA-206ENST00000430705 PTPN23Q9H3S7 1636 aa25.74■■□□□ 1.71
PTPRA-206ENST00000430705 A2ML1A8K2U0 1454 aa25.72■■□□□ 1.71
PTPRA-206ENST00000430705 TSPY4P0CV99 314 aa25.71■■□□□ 1.71
PTPRA-206ENST00000430705 TSPY10P0CW01 314 aa25.71■■□□□ 1.71
PTPRA-206ENST00000430705 ABCC3O15438 1527 aa25.7■■□□□ 1.7
PTPRA-206ENST00000430705 ZC3H13Q5T200 1668 aaKnown RBP25.7■■□□□ 1.7
PTPRA-206ENST00000430705 FBXO31Q5XUX0 539 aaPredicted RBP25.69■■□□□ 1.7
PTPRA-206ENST00000430705 NCKAP5LQ9HCH0 1330 aa25.68■■□□□ 1.7
PTPRA-206ENST00000430705 SHANK2Q9UPX8 1470 aa25.68■■□□□ 1.7
PTPRA-206ENST00000430705 ABCC5O15440 1437 aa25.68■■□□□ 1.7
PTPRA-206ENST00000430705 TNRQ92752 1358 aa25.67■■□□□ 1.7
PTPRA-206ENST00000430705 CEP152O94986 1710 aa25.66■■□□□ 1.7
PTPRA-206ENST00000430705 FGD6Q6ZV73 1430 aa25.65■■□□□ 1.7
PTPRA-206ENST00000430705 DUOX2Q9NRD8 1548 aa25.65■■□□□ 1.7
PTPRA-206ENST00000430705 NEURL4Q96JN8 1562 aa25.65■■□□□ 1.7
PTPRA-206ENST00000430705 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
PTPRA-206ENST00000430705 POLR1AO95602 1720 aaPredicted RBP25.63■■□□□ 1.69
PTPRA-206ENST00000430705 SPATA31D1Q6ZQQ2 1576 aa25.62■■□□□ 1.69
PTPRA-206ENST00000430705 DAPK1P53355 1430 aa25.62■■□□□ 1.69
PTPRA-206ENST00000430705 PRDM15P57071 1507 aaPredicted RBP25.61■■□□□ 1.69
PTPRA-206ENST00000430705 KIF15Q9NS87 1388 aa25.58■■□□□ 1.69
PTPRA-206ENST00000430705 PKD2Q13563 968 aa25.58■■□□□ 1.69
PTPRA-206ENST00000430705 DEPDC5O75140 1603 aa25.58■■□□□ 1.69
PTPRA-206ENST00000430705 ERVK-7P63135 1459 aa25.57■■□□□ 1.68
PTPRA-206ENST00000430705 IQSEC2Q5JU85 1478 aa25.57■■□□□ 1.68
PTPRA-206ENST00000430705 NLRP1Q9C000 1473 aa25.57■■□□□ 1.68
PTPRA-206ENST00000430705 ZNF335Q9H4Z2 1342 aaPredicted RBP25.57■■□□□ 1.68
PTPRA-206ENST00000430705 ERBINQ96RT1 1412 aa25.56■■□□□ 1.68
PTPRA-206ENST00000430705 APLP2Q06481 763 aa25.55■■□□□ 1.68
PTPRA-206ENST00000430705 UGGT1Q9NYU2 1555 aa25.54■■□□□ 1.68
PTPRA-206ENST00000430705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.5■■□□□ 1.67
PTPRA-206ENST00000430705 RRP7BPQ9NSQ0 103 aa25.49■■□□□ 1.67
PTPRA-206ENST00000430705 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
PTPRA-206ENST00000430705 UBR1Q8IWV7 1749 aa25.47■■□□□ 1.67
PTPRA-206ENST00000430705 ADGRL2O95490 1459 aa25.47■■□□□ 1.67
PTPRA-206ENST00000430705 MED14O60244 1454 aa25.45■■□□□ 1.66
PTPRA-206ENST00000430705 ARHGAP31Q2M1Z3 1444 aa25.45■■□□□ 1.66
PTPRA-206ENST00000430705 CFAP65Q6ZU64 1925 aaKnown RBP25.43■■□□□ 1.66
PTPRA-206ENST00000430705 LMTK2Q8IWU2 1503 aa25.42■■□□□ 1.66
PTPRA-206ENST00000430705 IQGAP1P46940 1657 aa25.42■■□□□ 1.66
PTPRA-206ENST00000430705 CHIC2Q9UKJ5 165 aa25.41■■□□□ 1.66
PTPRA-206ENST00000430705 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
PTPRA-206ENST00000430705 NPHP4O75161 1426 aaPredicted RBP25.39■■□□□ 1.66
PTPRA-206ENST00000430705 THEMISQ8N1K5 641 aaPredicted RBP25.39■■□□□ 1.66
PTPRA-206ENST00000430705 PIK3C2BO00750 1634 aa25.37■■□□□ 1.65
PTPRA-206ENST00000430705 STRCP1A6NGW2 1772 aa25.36■■□□□ 1.65
PTPRA-206ENST00000430705 ANKLE2Q86XL3 938 aa25.36■■□□□ 1.65
PTPRA-206ENST00000430705 CPS1P31327 1500 aa25.36■■□□□ 1.65
PTPRA-206ENST00000430705 EFCAB6Q5THR3 1501 aa25.36■■□□□ 1.65
PTPRA-206ENST00000430705 SYNMO15061 1565 aa25.35■■□□□ 1.65
PTPRA-206ENST00000430705 ARHGAP23Q9P227 1491 aa25.35■■□□□ 1.65
PTPRA-206ENST00000430705 SLIT1O75093 1534 aa25.34■■□□□ 1.65
PTPRA-206ENST00000430705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.34■■□□□ 1.655e-7■□□□□ 8.9
PTPRA-206ENST00000430705 FAM50AQ14320 339 aaKnown RBP25.31■■□□□ 1.64
PTPRA-206ENST00000430705 KANK1Q14678 1352 aa25.3■■□□□ 1.64
PTPRA-206ENST00000430705 SCAF11Q99590 1463 aaKnown RBP25.29■■□□□ 1.64
PTPRA-206ENST00000430705 ALKQ9UM73 1620 aa25.29■■□□□ 1.64
PTPRA-206ENST00000430705 KDM5AP29375 1690 aaKnown RBP25.29■■□□□ 1.64
PTPRA-206ENST00000430705 NOS1P29475 1434 aa25.28■■□□□ 1.64
PTPRA-206ENST00000430705 ANKRD50Q9ULJ7 1429 aa25.28■■□□□ 1.64
PTPRA-206ENST00000430705 UNC13BO14795 1591 aa25.27■■□□□ 1.64
PTPRA-206ENST00000430705 UBAP1LF5GYI3 381 aa25.27■■□□□ 1.64
PTPRA-206ENST00000430705 LTKP29376 864 aa25.24■■□□□ 1.63
PTPRA-206ENST00000430705 TET3O43151 1660 aa25.23■■□□□ 1.63
PTPRA-206ENST00000430705 ADGRB3O60242 1522 aa25.22■■□□□ 1.63
PTPRA-206ENST00000430705 LRRC7Q96NW7 1537 aa25.21■■□□□ 1.63
PTPRA-206ENST00000430705 GCC2Q8IWJ2 1684 aa25.2■■□□□ 1.62
PTPRA-206ENST00000430705 TMEM2Q9UHN6 1383 aa25.19■■□□□ 1.62
PTPRA-206ENST00000430705 RPRD2Q5VT52 1461 aaKnown RBP25.18■■□□□ 1.62
PTPRA-206ENST00000430705 IDI1Q13907 227 aa25.17■■□□□ 1.62
PTPRA-206ENST00000430705 ROCK1Q13464 1354 aa25.17■■□□□ 1.62
PTPRA-206ENST00000430705 XIRP1Q702N8 1843 aaKnown RBP25.16■■□□□ 1.62
PTPRA-206ENST00000430705 TXNDC2Q86VQ3 553 aa25.15■■□□□ 1.62
PTPRA-206ENST00000430705 E9PCH4 1651 aa25.15■■□□□ 1.62
PTPRA-206ENST00000430705 DISP3Q9P2K9 1392 aa25.15■■□□□ 1.62
PTPRA-206ENST00000430705 IQGAP3Q86VI3 1631 aa25.15■■□□□ 1.62
PTPRA-206ENST00000430705 MYO5BQ9ULV0 1848 aa25.14■■□□□ 1.62
PTPRA-206ENST00000430705 PPARGC1BQ86YN6 1023 aaKnown RBP25.14■■□□□ 1.62
PTPRA-206ENST00000430705 TMEM131LA2VDJ0 1609 aa25.1■■□□□ 1.61
PTPRA-206ENST00000430705 ILDR2Q71H61 639 aa25.08■■□□□ 1.61
PTPRA-206ENST00000430705 ZFYVE9O95405 1425 aa25.07■■□□□ 1.6
PTPRA-206ENST00000430705 PIP4K2BP78356 416 aa25.07■■□□□ 1.6
PTPRA-206ENST00000430705 HSPA1LP34931 641 aa25.06■■□□□ 1.6
PTPRA-206ENST00000430705 EID1Q9Y6B2 187 aa25.06■■□□□ 1.6
PTPRA-206ENST00000430705 TOM1O60784 492 aa25.05■■□□□ 1.6
PTPRA-206ENST00000430705 STAG3Q9UJ98 1225 aa25.05■■□□□ 1.6
PTPRA-206ENST00000430705 SLC52A1Q9NWF4 448 aa25.04■■□□□ 1.6
PTPRA-206ENST00000430705 NWD1Q149M9 1564 aa25.04■■□□□ 1.6
PTPRA-206ENST00000430705 SCAF1Q9H7N4 1312 aaKnown RBP25.04■■□□□ 1.6
PTPRA-206ENST00000430705 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms