RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 BCCIPQ9P287 314 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
SYNPO2-202ENST00000429713 FAM107BQ9H098 131 aa9.35□□□□□ -0.91
SYNPO2-202ENST00000429713 PES1O00541 588 aaKnown RBP9.35□□□□□ -0.91
SYNPO2-202ENST00000429713 RALBP1Q15311 655 aa9.35□□□□□ -0.91
SYNPO2-202ENST00000429713 FOXD1Q16676 465 aa9.35□□□□□ -0.91
SYNPO2-202ENST00000429713 FAM161AQ3B820 660 aa9.35□□□□□ -0.91
SYNPO2-202ENST00000429713 CLCN1P35523 988 aa9.35□□□□□ -0.91
SYNPO2-202ENST00000429713 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
SYNPO2-202ENST00000429713 SMAP1Q8IYB5 467 aaPredicted RBP9.34□□□□□ -0.91
SYNPO2-202ENST00000429713 MPHOSPH9Q99550 1183 aa9.34□□□□□ -0.91
SYNPO2-202ENST00000429713 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
SYNPO2-202ENST00000429713 SSR1P43307 286 aaKnown RBP9.34□□□□□ -0.91
SYNPO2-202ENST00000429713 CIZ1Q9ULV3 898 aaPredicted RBP9.33□□□□□ -0.92
SYNPO2-202ENST00000429713 BICRAQ9NZM4 1560 aa9.33□□□□□ -0.92
SYNPO2-202ENST00000429713 CCDC39Q9UFE4 941 aa9.33□□□□□ -0.92
SYNPO2-202ENST00000429713 PLEKHD1A6NEE1 506 aa9.33□□□□□ -0.92
SYNPO2-202ENST00000429713 ATAD2BQ9ULI0 1458 aa9.33□□□□□ -0.92
SYNPO2-202ENST00000429713 HSP90AB1P08238 724 aaKnown RBP9.33□□□□□ -0.92
SYNPO2-202ENST00000429713 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 RBM28Q9NW13 759 aaKnown RBP9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 TIAM1Q13009 1591 aa9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 MNS1Q8NEH6 495 aa9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 CFAP53Q96M91 514 aa9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 TMF1P82094 1093 aa9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 ARGLU1Q9NWB6 273 aaPredicted RBP9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
SYNPO2-202ENST00000429713 ZRSR1Q15695 479 aaKnown RBP9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 KLHL34Q8N239 644 aa9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 STAG3Q9UJ98 1225 aa9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 ESPNB1AK53 854 aa9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 ATP6V1DQ9Y5K8 247 aa9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 WASHC2AQ641Q2 1341 aa9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 WASHC2CQ9Y4E1 1318 aa9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
SYNPO2-202ENST00000429713 KIF2AO00139 706 aaPredicted RBP9.3□□□□□ -0.92
SYNPO2-202ENST00000429713 ATAD2Q6PL18 1390 aa9.3□□□□□ -0.92
SYNPO2-202ENST00000429713 CGNL1Q0VF96 1302 aa9.3□□□□□ -0.92
SYNPO2-202ENST00000429713 CNTLNQ9NXG0 1405 aa9.3□□□□□ -0.92
SYNPO2-202ENST00000429713 GOLGA6L4A6NEF3 574 aa9.29□□□□□ -0.92
SYNPO2-202ENST00000429713 ACBD3Q9H3P7 528 aa9.29□□□□□ -0.92
SYNPO2-202ENST00000429713 KIF15Q9NS87 1388 aa9.29□□□□□ -0.92
SYNPO2-202ENST00000429713 ZNF771Q7L3S4 317 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-202ENST00000429713 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
SYNPO2-202ENST00000429713 ZSCAN30Q86W11 494 aa9.29□□□□□ -0.92
SYNPO2-202ENST00000429713 RRBP1Q9P2E9 1410 aaKnown RBP9.29□□□□□ -0.92
SYNPO2-202ENST00000429713 DEF6Q9H4E7 631 aa9.28□□□□□ -0.92
SYNPO2-202ENST00000429713 SMG6Q86US8 1419 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-202ENST00000429713 PDE4AP27815 886 aa9.28□□□□□ -0.92
SYNPO2-202ENST00000429713 BIVM-ERCC5R4GMW8 1640 aa9.28□□□□□ -0.92
SYNPO2-202ENST00000429713 SPRYD3Q8NCJ5 442 aa9.28□□□□□ -0.92
SYNPO2-202ENST00000429713 PRIMPOLQ96LW4 560 aa9.28□□□□□ -0.92
SYNPO2-202ENST00000429713 ARAP1Q96P48 1450 aa9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 MBD3O95983 291 aa9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 CHMP4CQ96CF2 233 aa9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 NFKBIBQ15653 356 aa9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 SLKQ9H2G2 1235 aaPredicted RBP9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 ZMYM3Q14202 1370 aa9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 CCP110O43303 1012 aa9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 IRX3P78415 501 aaPredicted RBP9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
SYNPO2-202ENST00000429713 AMER1Q5JTC6 1135 aaPredicted RBP9.26□□□□□ -0.93
SYNPO2-202ENST00000429713 CHMP5Q9NZZ3 219 aa9.26□□□□□ -0.93
SYNPO2-202ENST00000429713 FYCO1Q9BQS8 1478 aa9.26□□□□□ -0.93
SYNPO2-202ENST00000429713 DHX29Q7Z478 1369 aaKnown RBP9.26□□□□□ -0.93
SYNPO2-202ENST00000429713 PMFBP1Q8TBY8 1022 aa9.25□□□□□ -0.93
SYNPO2-202ENST00000429713 AK7Q96M32 723 aa9.25□□□□□ -0.93
SYNPO2-202ENST00000429713 UACAQ9BZF9 1416 aa9.25□□□□□ -0.93
SYNPO2-202ENST00000429713 VGFO15240 615 aaPredicted RBP9.25□□□□□ -0.93
SYNPO2-202ENST00000429713 PRKRIP1Q9H875 184 aaPredicted RBP9.25□□□□□ -0.93
SYNPO2-202ENST00000429713 CUL7Q14999 1698 aa9.25□□□□□ -0.93
SYNPO2-202ENST00000429713 PKD2Q13563 968 aa9.24□□□□□ -0.93
SYNPO2-202ENST00000429713 UTP14CQ5TAP6 766 aaKnown RBP9.24□□□□□ -0.93
SYNPO2-202ENST00000429713 GZF1Q9H116 711 aaPredicted RBP9.24□□□□□ -0.93
SYNPO2-202ENST00000429713 MCCP23508 829 aa9.24□□□□□ -0.93
SYNPO2-202ENST00000429713 TPM1P09493 284 aa9.24□□□□□ -0.93
SYNPO2-202ENST00000429713 PCF11O94913 1555 aaKnown RBP9.24□□□□□ -0.93
SYNPO2-202ENST00000429713 MYBBP1AQ9BQG0 1328 aaKnown RBP9.24□□□□□ -0.93
SYNPO2-202ENST00000429713 TPM4P67936 248 aa9.24□□□□□ -0.93
SYNPO2-202ENST00000429713 CFAP43Q8NDM7 1665 aa9.23□□□□□ -0.93
SYNPO2-202ENST00000429713 MAP3K1Q13233 1512 aa9.23□□□□□ -0.93
SYNPO2-202ENST00000429713 NASPP49321 788 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-202ENST00000429713 TUBB4AP04350 444 aa9.23□□□□□ -0.93
SYNPO2-202ENST00000429713 RWDD1Q9H446 243 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-202ENST00000429713 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
SYNPO2-202ENST00000429713 USP47Q96K76 1375 aa9.23□□□□□ -0.93
SYNPO2-202ENST00000429713 RRP1P56182 461 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-202ENST00000429713 NUCB2P80303 420 aa9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 NLRP13Q86W25 1043 aa9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 EFCAB5A4FU69 1503 aa9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 FGD6Q6ZV73 1430 aa9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 HECW1Q76N89 1606 aa9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 FANCD2Q9BXW9 1451 aa9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 ZNF622Q969S3 477 aaKnown RBP eCLIP9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 NUP155O75694 1391 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms