RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 ERBINQ96RT1 1412 aa25.5■■□□□ 1.67
PDE6B-202ENST00000429163 MRS2Q9HD23 443 aa25.5■■□□□ 1.67
PDE6B-202ENST00000429163 PLCH2O75038 1416 aa25.49■■□□□ 1.67
PDE6B-202ENST00000429163 ARAP3Q8WWN8 1544 aa25.49■■□□□ 1.67
PDE6B-202ENST00000429163 LAMC1P11047 1609 aa25.48■■□□□ 1.67
PDE6B-202ENST00000429163 CCDC144AA2RUR9 1427 aa25.47■■□□□ 1.67
PDE6B-202ENST00000429163 CARD11Q9BXL7 1154 aa25.46■■□□□ 1.67
PDE6B-202ENST00000429163 ZCCHC11Q5TAX3 1644 aaKnown RBP25.44■■□□□ 1.66
PDE6B-202ENST00000429163 ERCC6L2Q5T890 1561 aa25.43■■□□□ 1.66
PDE6B-202ENST00000429163 GPRASP1Q5JY77 1395 aa25.43■■□□□ 1.66
PDE6B-202ENST00000429163 CCDC184Q52MB2 194 aa25.42■■□□□ 1.66
PDE6B-202ENST00000429163 TRPM1Q7Z4N2 1603 aa25.42■■□□□ 1.66
PDE6B-202ENST00000429163 PRAG1Q86YV5 1406 aa25.42■■□□□ 1.66
PDE6B-202ENST00000429163 ABCC1P33527 1531 aa25.4■■□□□ 1.66
PDE6B-202ENST00000429163 ZNF326Q5BKZ1 582 aaKnown RBP25.4■■□□□ 1.66
PDE6B-202ENST00000429163 EFCAB2Q5VUJ9 269 aa25.4■■□□□ 1.66
PDE6B-202ENST00000429163 EIF2AK4Q9P2K8 1649 aaKnown RBP25.4■■□□□ 1.66
PDE6B-202ENST00000429163 BCANQ96GW7 911 aa25.39■■□□□ 1.65
PDE6B-202ENST00000429163 PLA2R1Q13018 1463 aa25.38■■□□□ 1.65
PDE6B-202ENST00000429163 RTEL1-TNFRSF6BF6WH68 1400 aa25.38■■□□□ 1.65
PDE6B-202ENST00000429163 DCAF11Q8TEB1 546 aa25.38■■□□□ 1.65
PDE6B-202ENST00000429163 E9PCH4 1651 aa25.38■■□□□ 1.65
PDE6B-202ENST00000429163 FAM9BQ8IZU0 186 aa25.35■■□□□ 1.65
PDE6B-202ENST00000429163 RALBP1Q15311 655 aa25.32■■□□□ 1.64
PDE6B-202ENST00000429163 A2MP01023 1474 aa25.32■■□□□ 1.64
PDE6B-202ENST00000429163 ST20-MTHFSA0A0A6YYL1 179 aa25.31■■□□□ 1.64
PDE6B-202ENST00000429163 PRDM15P57071 1507 aaPredicted RBP25.3■■□□□ 1.64
PDE6B-202ENST00000429163 STAC3Q96MF2 364 aa25.3■■□□□ 1.64
PDE6B-202ENST00000429163 BRD4O60885 1362 aaPredicted RBP25.29■■□□□ 1.64
PDE6B-202ENST00000429163 SMG6Q86US8 1419 aaKnown RBP25.29■■□□□ 1.64
PDE6B-202ENST00000429163 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
PDE6B-202ENST00000429163 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
PDE6B-202ENST00000429163 PPP4R2Q9NY27 417 aa25.25■■□□□ 1.63
PDE6B-202ENST00000429163 MYBBP1AQ9BQG0 1328 aaKnown RBP25.24■■□□□ 1.63
PDE6B-202ENST00000429163 PNISRQ8TF01 805 aaKnown RBP25.23■■□□□ 1.63
PDE6B-202ENST00000429163 LRPPRCP42704 1394 aaKnown RBP25.23■■□□□ 1.63
PDE6B-202ENST00000429163 DEPDC5O75140 1603 aa25.22■■□□□ 1.63
PDE6B-202ENST00000429163 COL17A1Q9UMD9 1497 aaPredicted RBP25.22■■□□□ 1.63
PDE6B-202ENST00000429163 WDR7Q9Y4E6 1490 aa25.22■■□□□ 1.63
PDE6B-202ENST00000429163 RNF17Q9BXT8 1623 aaKnown RBP25.21■■□□□ 1.63
PDE6B-202ENST00000429163 ZFYVE16Q7Z3T8 1539 aa25.21■■□□□ 1.63
PDE6B-202ENST00000429163 TRAPPC8Q9Y2L5 1435 aa25.21■■□□□ 1.63
PDE6B-202ENST00000429163 NEURL4Q96JN8 1562 aa25.21■■□□□ 1.63
PDE6B-202ENST00000429163 INSRP06213 1382 aa25.2■■□□□ 1.63
PDE6B-202ENST00000429163 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
PDE6B-202ENST00000429163 TMC1Q8TDI8 760 aa25.19■■□□□ 1.62
PDE6B-202ENST00000429163 TRPM2O94759 1503 aa25.19■■□□□ 1.62
PDE6B-202ENST00000429163 ABCA9Q8IUA7 1624 aa25.19■■□□□ 1.62
PDE6B-202ENST00000429163 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
PDE6B-202ENST00000429163 POLR3GLQ9BT43 218 aa25.18■■□□□ 1.62
PDE6B-202ENST00000429163 SPAG9O60271 1321 aaKnown RBP25.18■■□□□ 1.62
PDE6B-202ENST00000429163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.18■■□□□ 1.62
PDE6B-202ENST00000429163 PTPRTO14522 1441 aa25.17■■□□□ 1.62
PDE6B-202ENST00000429163 PARD3Q8TEW0 1356 aa25.16■■□□□ 1.62
PDE6B-202ENST00000429163 NUDCQ9Y266 331 aa25.16■■□□□ 1.62
PDE6B-202ENST00000429163 RNF123Q5XPI4 1314 aa25.16■■□□□ 1.62
PDE6B-202ENST00000429163 INO80Q9ULG1 1556 aaPredicted RBP25.15■■□□□ 1.62
PDE6B-202ENST00000429163 TET3O43151 1660 aa25.14■■□□□ 1.61
PDE6B-202ENST00000429163 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.61
PDE6B-202ENST00000429163 CEP152O94986 1710 aa25.12■■□□□ 1.61
PDE6B-202ENST00000429163 NLRP13Q86W25 1043 aa25.12■■□□□ 1.61
PDE6B-202ENST00000429163 RGL3Q3MIN7 710 aa25.11■■□□□ 1.61
PDE6B-202ENST00000429163 TESK2Q96S53 571 aa25.11■■□□□ 1.61
PDE6B-202ENST00000429163 RBM19Q9Y4C8 960 aaKnown RBP25.11■■□□□ 1.61
PDE6B-202ENST00000429163 SPHKAPQ2M3C7 1700 aa25.11■■□□□ 1.61
PDE6B-202ENST00000429163 SCAPERQ9BY12 1400 aa25.1■■□□□ 1.61
PDE6B-202ENST00000429163 ATP7AQ04656 1500 aa25.1■■□□□ 1.61
PDE6B-202ENST00000429163 PER1O15534 1290 aaPredicted RBP25.09■■□□□ 1.61
PDE6B-202ENST00000429163 NBPF1Q3BBV0 1214 aa25.09■■□□□ 1.61
PDE6B-202ENST00000429163 MADDQ8WXG6 1647 aa25.09■■□□□ 1.61
PDE6B-202ENST00000429163 FANCAO15360 1455 aa25.08■■□□□ 1.61
PDE6B-202ENST00000429163 KANK1Q14678 1352 aa25.08■■□□□ 1.61
PDE6B-202ENST00000429163 TMF1P82094 1093 aa25.08■■□□□ 1.61
PDE6B-202ENST00000429163 KIAA1210Q9ULL0 1709 aa25.06■■□□□ 1.6
PDE6B-202ENST00000429163 IQGAP1P46940 1657 aa25.06■■□□□ 1.6
PDE6B-202ENST00000429163 SLC24A1O60721 1099 aa25.03■■□□□ 1.6
PDE6B-202ENST00000429163 PDE3BQ13370 1112 aa25.03■■□□□ 1.6
PDE6B-202ENST00000429163 DISP3Q9P2K9 1392 aa25.01■■□□□ 1.59
PDE6B-202ENST00000429163 IRX6P78412 446 aaPredicted RBP25.01■■□□□ 1.59
PDE6B-202ENST00000429163 CDCA8Q53HL2 280 aa25.01■■□□□ 1.59
PDE6B-202ENST00000429163 AFAP1Q8N556 730 aa25■■□□□ 1.59
PDE6B-202ENST00000429163 ADGRL1O94910 1474 aa24.99■■□□□ 1.59
PDE6B-202ENST00000429163 CLTCL1P53675 1640 aa24.99■■□□□ 1.59
PDE6B-202ENST00000429163 SCAF11Q99590 1463 aaKnown RBP24.99■■□□□ 1.59
PDE6B-202ENST00000429163 FANCIQ9NVI1 1328 aa24.97■■□□□ 1.59
PDE6B-202ENST00000429163 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
PDE6B-202ENST00000429163 MYOM2P54296 1465 aa24.95■■□□□ 1.58
PDE6B-202ENST00000429163 EIF3AQ14152 1382 aaKnown RBP24.94■■□□□ 1.58
PDE6B-202ENST00000429163 CFAP74Q9C0B2 1584 aa24.94■■□□□ 1.58
PDE6B-202ENST00000429163 MROH1Q8NDA8 1641 aa24.94■■□□□ 1.58
PDE6B-202ENST00000429163 SYNMO15061 1565 aa24.94■■□□□ 1.58
PDE6B-202ENST00000429163 ASXL2Q76L83 1435 aa24.93■■□□□ 1.58
PDE6B-202ENST00000429163 ANP32EQ9BTT0 268 aa24.93■■□□□ 1.58
PDE6B-202ENST00000429163 BLMP54132 1417 aaPredicted RBP24.91■■□□□ 1.58
PDE6B-202ENST00000429163 PANK3Q9H999 370 aa24.91■■□□□ 1.58
PDE6B-202ENST00000429163 ZNF518AQ6AHZ1 1483 aa24.91■■□□□ 1.58
PDE6B-202ENST00000429163 NPC1L1Q9UHC9 1359 aa24.9■■□□□ 1.58
PDE6B-202ENST00000429163 EFCAB6Q5THR3 1501 aa24.9■■□□□ 1.58
PDE6B-202ENST00000429163 KIDINS220Q9ULH0 1771 aa24.87■■□□□ 1.57
PDE6B-202ENST00000429163 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms