RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 RNF17Q9BXT8 1623 aaKnown RBP13.16□□□□□ -0.3
SMC6-204ENST00000428868 YEATS2Q9ULM3 1422 aa13.15□□□□□ -0.3
SMC6-204ENST00000428868 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
SMC6-204ENST00000428868 TRIM52Q96A61 297 aa13.14□□□□□ -0.31
SMC6-204ENST00000428868 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
SMC6-204ENST00000428868 E9PCH4 1651 aa13.13□□□□□ -0.31
SMC6-204ENST00000428868 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
SMC6-204ENST00000428868 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
SMC6-204ENST00000428868 A2MP01023 1474 aa13.12□□□□□ -0.31
SMC6-204ENST00000428868 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
SMC6-204ENST00000428868 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
SMC6-204ENST00000428868 VWDEQ8N2E2 1590 aa13.11□□□□□ -0.31
SMC6-204ENST00000428868 TET3O43151 1660 aa13.1□□□□□ -0.31
SMC6-204ENST00000428868 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
SMC6-204ENST00000428868 FOXD1Q16676 465 aa13.09□□□□□ -0.31
SMC6-204ENST00000428868 NUP155O75694 1391 aa13.08□□□□□ -0.31
SMC6-204ENST00000428868 SPHKAPQ2M3C7 1700 aa13.08□□□□□ -0.32
SMC6-204ENST00000428868 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
SMC6-204ENST00000428868 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
SMC6-204ENST00000428868 SIN3AQ96ST3 1273 aa13.07□□□□□ -0.32
SMC6-204ENST00000428868 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
SMC6-204ENST00000428868 CAMSAP1Q5T5Y3 1602 aa13.06□□□□□ -0.32
SMC6-204ENST00000428868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■□□□□ 11.1
SMC6-204ENST00000428868 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
SMC6-204ENST00000428868 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
SMC6-204ENST00000428868 ZC3H13Q5T200 1668 aaKnown RBP13.04□□□□□ -0.32
SMC6-204ENST00000428868 ATP10AO60312 1499 aa13.04□□□□□ -0.32
SMC6-204ENST00000428868 CLTCQ00610 1675 aaKnown RBP13.03□□□□□ -0.32
SMC6-204ENST00000428868 KIF3BO15066 747 aa13.03□□□□□ -0.32
SMC6-204ENST00000428868 ANKRD30BQ9BXX2 1392 aa13.03□□□□□ -0.32
SMC6-204ENST00000428868 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
SMC6-204ENST00000428868 ABCC3O15438 1527 aa13.02□□□□□ -0.33
SMC6-204ENST00000428868 PKD2Q13563 968 aa13.01□□□□□ -0.33
SMC6-204ENST00000428868 AGLP35573 1532 aa13□□□□□ -0.33
SMC6-204ENST00000428868 LMTK2Q8IWU2 1503 aa13□□□□□ -0.33
SMC6-204ENST00000428868 NEUROD1Q13562 356 aa13□□□□□ -0.33
SMC6-204ENST00000428868 CLTCL1P53675 1640 aa12.99□□□□□ -0.33
SMC6-204ENST00000428868 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
SMC6-204ENST00000428868 ACIN1Q9UKV3 1341 aaKnown RBP12.99□□□□□ -0.33
SMC6-204ENST00000428868 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
SMC6-204ENST00000428868 MYO5BQ9ULV0 1848 aa12.98□□□□□ -0.33
SMC6-204ENST00000428868 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
SMC6-204ENST00000428868 KIF1BO60333 1816 aa12.97□□□□□ -0.33
SMC6-204ENST00000428868 PREX1Q8TCU6 1659 aa12.97□□□□□ -0.33
SMC6-204ENST00000428868 UGGT1Q9NYU2 1555 aa12.96□□□□□ -0.33
SMC6-204ENST00000428868 TRPM2O94759 1503 aa12.96□□□□□ -0.33
SMC6-204ENST00000428868 FER1L4A9Z1Z3 1794 aa12.96□□□□□ -0.34
SMC6-204ENST00000428868 GGT6Q6P531 493 aa12.95□□□□□ -0.34
SMC6-204ENST00000428868 KANK1Q14678 1352 aa12.94□□□□□ -0.34
SMC6-204ENST00000428868 SYNMO15061 1565 aa12.94□□□□□ -0.34
SMC6-204ENST00000428868 IFT172Q9UG01 1749 aa12.93□□□□□ -0.34
SMC6-204ENST00000428868 NPATQ14207 1427 aa12.92□□□□□ -0.34
SMC6-204ENST00000428868 PIK3C2BO00750 1634 aa12.91□□□□□ -0.34
SMC6-204ENST00000428868 PTPRTO14522 1441 aa12.91□□□□□ -0.34
SMC6-204ENST00000428868 TONSLQ96HA7 1378 aa12.9□□□□□ -0.34
SMC6-204ENST00000428868 C3P01024 1663 aa12.89□□□□□ -0.35
SMC6-204ENST00000428868 MLECQ14165 292 aa12.88□□□□□ -0.35
SMC6-204ENST00000428868 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
SMC6-204ENST00000428868 PPLO60437 1756 aa12.87□□□□□ -0.35
SMC6-204ENST00000428868 RIMS1Q86UR5 1692 aaKnown RBP12.87□□□□□ -0.35
SMC6-204ENST00000428868 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
SMC6-204ENST00000428868 L3MBTL2Q969R5 705 aa12.86□□□□□ -0.35
SMC6-204ENST00000428868 MADDQ8WXG6 1647 aa12.86□□□□□ -0.35
SMC6-204ENST00000428868 NOS1P29475 1434 aa12.85□□□□□ -0.35
SMC6-204ENST00000428868 ARHGAP31Q2M1Z3 1444 aa12.85□□□□□ -0.35
SMC6-204ENST00000428868 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
SMC6-204ENST00000428868 ADGRB3O60242 1522 aa12.84□□□□□ -0.35
SMC6-204ENST00000428868 ADAMTSL3P82987 1691 aa12.84□□□□□ -0.35
SMC6-204ENST00000428868 PPP1R15AO75807 674 aaPredicted RBP12.84□□□□□ -0.35
SMC6-204ENST00000428868 SPATA31E1Q6ZUB1 1445 aa12.84□□□□□ -0.35
SMC6-204ENST00000428868 ERVK-7P63135 1459 aa12.84□□□□□ -0.35
SMC6-204ENST00000428868 SPATA31D1Q6ZQQ2 1576 aa12.83□□□□□ -0.36
SMC6-204ENST00000428868 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
SMC6-204ENST00000428868 NEURL4Q96JN8 1562 aa12.82□□□□□ -0.36
SMC6-204ENST00000428868 CNTLNQ9NXG0 1405 aa12.82□□□□□ -0.36
SMC6-204ENST00000428868 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
SMC6-204ENST00000428868 TMEM131LA2VDJ0 1609 aa12.81□□□□□ -0.36
SMC6-204ENST00000428868 NBPF8Q3BBV2 869 aa12.8□□□□□ -0.36
SMC6-204ENST00000428868 FBXO31Q5XUX0 539 aaPredicted RBP12.79□□□□□ -0.36
SMC6-204ENST00000428868 FBXO41Q8TF61 875 aa12.79□□□□□ -0.36
SMC6-204ENST00000428868 UBR1Q8IWV7 1749 aa12.78□□□□□ -0.36
SMC6-204ENST00000428868 RGL3Q3MIN7 710 aa12.77□□□□□ -0.37
SMC6-204ENST00000428868 UHRF1BP1Q6BDS2 1440 aa12.77□□□□□ -0.37
SMC6-204ENST00000428868 NEXMIFQ5QGS0 1516 aa12.77□□□□□ -0.37
SMC6-204ENST00000428868 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
SMC6-204ENST00000428868 ZMYM3Q14202 1370 aa12.76□□□□□ -0.37
SMC6-204ENST00000428868 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
SMC6-204ENST00000428868 MYO3AQ8NEV4 1616 aa12.75□□□□□ -0.37
SMC6-204ENST00000428868 KIAA1210Q9ULL0 1709 aa12.75□□□□□ -0.37
SMC6-204ENST00000428868 RALGAPBQ86X10 1494 aa12.74□□□□□ -0.37
SMC6-204ENST00000428868 PRAG1Q86YV5 1406 aa12.74□□□□□ -0.37
SMC6-204ENST00000428868 DCAF11Q8TEB1 546 aa12.74□□□□□ -0.37
SMC6-204ENST00000428868 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
SMC6-204ENST00000428868 KDM5AP29375 1690 aaKnown RBP12.73□□□□□ -0.37
SMC6-204ENST00000428868 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
SMC6-204ENST00000428868 IQGAP1P46940 1657 aa12.73□□□□□ -0.37
SMC6-204ENST00000428868 LAMC1P11047 1609 aa12.73□□□□□ -0.37
SMC6-204ENST00000428868 MYOM2P54296 1465 aa12.72□□□□□ -0.37
SMC6-204ENST00000428868 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
SMC6-204ENST00000428868 IDI1Q13907 227 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms