RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 ILDR1Q86SU0 546 aaPredicted RBP23.14■■□□□ 1.29
IMP4-204ENST00000428740 DAPK1P53355 1430 aa23.14■■□□□ 1.29
IMP4-204ENST00000428740 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
IMP4-204ENST00000428740 FAM50AQ14320 339 aaKnown RBP23.13■■□□□ 1.29
IMP4-204ENST00000428740 ANKRD30AQ9BXX3 1397 aa23.13■■□□□ 1.29
IMP4-204ENST00000428740 KIF15Q9NS87 1388 aa23.13■■□□□ 1.29
IMP4-204ENST00000428740 KDM5DQ9BY66 1539 aa23.13■■□□□ 1.29
IMP4-204ENST00000428740 FBXO31Q5XUX0 539 aaPredicted RBP23.09■■□□□ 1.29
IMP4-204ENST00000428740 CHIC2Q9UKJ5 165 aa23.09■■□□□ 1.29
IMP4-204ENST00000428740 DNMT1P26358 1616 aaKnown RBP23.08■■□□□ 1.29
IMP4-204ENST00000428740 EIF2AK4Q9P2K8 1649 aaKnown RBP23.08■■□□□ 1.29
IMP4-204ENST00000428740 PZPP20742 1482 aa23.08■■□□□ 1.29
IMP4-204ENST00000428740 PTPRTO14522 1441 aa23.08■■□□□ 1.28
IMP4-204ENST00000428740 ERBINQ96RT1 1412 aa23.08■■□□□ 1.28
IMP4-204ENST00000428740 TNRQ92752 1358 aa23.07■■□□□ 1.28
IMP4-204ENST00000428740 PKD2Q13563 968 aa23.07■■□□□ 1.28
IMP4-204ENST00000428740 FBXO41Q8TF61 875 aa23.07■■□□□ 1.28
IMP4-204ENST00000428740 NCOA1Q15788 1441 aa23.05■■□□□ 1.28
IMP4-204ENST00000428740 RNF17Q9BXT8 1623 aaKnown RBP23.04■■□□□ 1.28
IMP4-204ENST00000428740 KANK1Q14678 1352 aa23.02■■□□□ 1.28
IMP4-204ENST00000428740 CERKQ8TCT0 537 aa23.02■■□□□ 1.28
IMP4-204ENST00000428740 A2ML1A8K2U0 1454 aa23.02■■□□□ 1.28
IMP4-204ENST00000428740 CROCC2H7BZ55 1655 aa23.02■■□□□ 1.28
IMP4-204ENST00000428740 STRCQ7RTU9 1775 aa23.01■■□□□ 1.27
IMP4-204ENST00000428740 THEMISQ8N1K5 641 aaPredicted RBP23.01■■□□□ 1.27
IMP4-204ENST00000428740 CAMSAP1Q5T5Y3 1602 aa23■■□□□ 1.27
IMP4-204ENST00000428740 PLA2R1Q13018 1463 aa23■■□□□ 1.27
IMP4-204ENST00000428740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.272e-7■■■□□ 17.7
IMP4-204ENST00000428740 CEP170BQ9Y4F5 1589 aaPredicted RBP23■■□□□ 1.27
IMP4-204ENST00000428740 ABCC3O15438 1527 aa22.99■■□□□ 1.27
IMP4-204ENST00000428740 MYO3AQ8NEV4 1616 aa22.99■■□□□ 1.27
IMP4-204ENST00000428740 NCKAP5LQ9HCH0 1330 aa22.99■■□□□ 1.27
IMP4-204ENST00000428740 ZC3H13Q5T200 1668 aaKnown RBP22.98■■□□□ 1.27
IMP4-204ENST00000428740 ADGRL2O95490 1459 aa22.98■■□□□ 1.27
IMP4-204ENST00000428740 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
IMP4-204ENST00000428740 ZNF142P52746 1687 aaPredicted RBP22.97■■□□□ 1.27
IMP4-204ENST00000428740 ARHGAP31Q2M1Z3 1444 aa22.95■■□□□ 1.26
IMP4-204ENST00000428740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.95■■□□□ 1.26
IMP4-204ENST00000428740 ANKLE2Q86XL3 938 aa22.94■■□□□ 1.26
IMP4-204ENST00000428740 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
IMP4-204ENST00000428740 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
IMP4-204ENST00000428740 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
IMP4-204ENST00000428740 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
IMP4-204ENST00000428740 ERVK-7P63135 1459 aa22.9■■□□□ 1.26
IMP4-204ENST00000428740 ROCK1Q13464 1354 aa22.89■■□□□ 1.26
IMP4-204ENST00000428740 SPATA31D1Q6ZQQ2 1576 aa22.89■■□□□ 1.26
IMP4-204ENST00000428740 UGGT1Q9NYU2 1555 aa22.87■■□□□ 1.25
IMP4-204ENST00000428740 DEPDC5O75140 1603 aa22.86■■□□□ 1.25
IMP4-204ENST00000428740 ITGAEP38570 1179 aa22.85■■□□□ 1.25
IMP4-204ENST00000428740 LMTK2Q8IWU2 1503 aa22.85■■□□□ 1.25
IMP4-204ENST00000428740 CEP152O94986 1710 aa22.83■■□□□ 1.25
IMP4-204ENST00000428740 VWDEQ8N2E2 1590 aa22.81■■□□□ 1.24
IMP4-204ENST00000428740 STAG3Q9UJ98 1225 aa22.81■■□□□ 1.24
IMP4-204ENST00000428740 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
IMP4-204ENST00000428740 ZNF335Q9H4Z2 1342 aaPredicted RBP22.79■■□□□ 1.24
IMP4-204ENST00000428740 EID1Q9Y6B2 187 aa22.77■■□□□ 1.24
IMP4-204ENST00000428740 LTBP4Q8N2S1 1624 aa22.77■■□□□ 1.24
IMP4-204ENST00000428740 IQSEC2Q5JU85 1478 aa22.77■■□□□ 1.24
IMP4-204ENST00000428740 RRBP1Q9P2E9 1410 aaKnown RBP22.76■■□□□ 1.23
IMP4-204ENST00000428740 IDI1Q13907 227 aa22.76■■□□□ 1.23
IMP4-204ENST00000428740 MED14O60244 1454 aa22.76■■□□□ 1.23
IMP4-204ENST00000428740 RPRD2Q5VT52 1461 aaKnown RBP22.75■■□□□ 1.23
IMP4-204ENST00000428740 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
IMP4-204ENST00000428740 TXNDC2Q86VQ3 553 aa22.74■■□□□ 1.23
IMP4-204ENST00000428740 NOS1P29475 1434 aa22.73■■□□□ 1.23
IMP4-204ENST00000428740 CFAP65Q6ZU64 1925 aaKnown RBP22.72■■□□□ 1.23
IMP4-204ENST00000428740 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
IMP4-204ENST00000428740 NUP155O75694 1391 aa22.7■■□□□ 1.22
IMP4-204ENST00000428740 POLR1AO95602 1720 aaPredicted RBP22.7■■□□□ 1.22
IMP4-204ENST00000428740 NEURL4Q96JN8 1562 aa22.69■■□□□ 1.22
IMP4-204ENST00000428740 HDGFP51858 240 aaKnown RBP22.69■■□□□ 1.22
IMP4-204ENST00000428740 TMEM2Q9UHN6 1383 aa22.68■■□□□ 1.22
IMP4-204ENST00000428740 SLIT1O75093 1534 aa22.67■■□□□ 1.22
IMP4-204ENST00000428740 ARHGAP23Q9P227 1491 aa22.67■■□□□ 1.22
IMP4-204ENST00000428740 LTKP29376 864 aa22.67■■□□□ 1.22
IMP4-204ENST00000428740 UBR1Q8IWV7 1749 aa22.67■■□□□ 1.22
IMP4-204ENST00000428740 SCAF11Q99590 1463 aaKnown RBP22.66■■□□□ 1.22
IMP4-204ENST00000428740 UNC13BO14795 1591 aa22.66■■□□□ 1.22
IMP4-204ENST00000428740 TET3O43151 1660 aa22.65■■□□□ 1.22
IMP4-204ENST00000428740 CPS1P31327 1500 aa22.64■■□□□ 1.21
IMP4-204ENST00000428740 KDM5AP29375 1690 aaKnown RBP22.63■■□□□ 1.21
IMP4-204ENST00000428740 PIK3C2BO00750 1634 aa22.62■■□□□ 1.21
IMP4-204ENST00000428740 UBAP1LF5GYI3 381 aa22.62■■□□□ 1.21
IMP4-204ENST00000428740 SYNMO15061 1565 aa22.61■■□□□ 1.21
IMP4-204ENST00000428740 IQGAP1P46940 1657 aa22.6■■□□□ 1.21
IMP4-204ENST00000428740 TOM1O60784 492 aa22.59■■□□□ 1.21
IMP4-204ENST00000428740 GCC2Q8IWJ2 1684 aa22.58■■□□□ 1.21
IMP4-204ENST00000428740 IQGAP3Q86VI3 1631 aa22.58■■□□□ 1.21
IMP4-204ENST00000428740 NAIPQ13075 1403 aa22.57■■□□□ 1.2
IMP4-204ENST00000428740 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.57■■□□□ 1.2
IMP4-204ENST00000428740 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
IMP4-204ENST00000428740 BCANQ96GW7 911 aa22.55■■□□□ 1.2
IMP4-204ENST00000428740 ADGRB3O60242 1522 aa22.55■■□□□ 1.2
IMP4-204ENST00000428740 TRIM52Q96A61 297 aa22.53■■□□□ 1.2
IMP4-204ENST00000428740 HFM1A2PYH4 1435 aa22.53■■□□□ 1.2
IMP4-204ENST00000428740 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
IMP4-204ENST00000428740 E9PCH4 1651 aa22.51■■□□□ 1.19
IMP4-204ENST00000428740 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
IMP4-204ENST00000428740 KCNA6P17658 529 aa22.5■■□□□ 1.19
IMP4-204ENST00000428740 SLC26A8Q96RN1 970 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms