RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 SYCP2Q9BX26 1530 aa11.12□□□□□ -0.63
CLHC1-207ENST00000428621 MYT1Q01538 1121 aa11.12□□□□□ -0.63
CLHC1-207ENST00000428621 ROCK2O75116 1388 aaKnown RBP11.12□□□□□ -0.63
CLHC1-207ENST00000428621 HNRNPUQ00839 825 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLHC1-207ENST00000428621 BCORL1Q5H9F3 1711 aa11.11□□□□□ -0.63
CLHC1-207ENST00000428621 MYO5CQ9NQX4 1742 aa11.11□□□□□ -0.63
CLHC1-207ENST00000428621 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
CLHC1-207ENST00000428621 ARHGAP5Q13017 1502 aa11.1□□□□□ -0.63
CLHC1-207ENST00000428621 DHX29Q7Z478 1369 aaKnown RBP11.1□□□□□ -0.63
CLHC1-207ENST00000428621 MAGI2Q86UL8 1455 aa11.1□□□□□ -0.63
CLHC1-207ENST00000428621 UHRF1BP1LA0JNW5 1464 aa11.09□□□□□ -0.63
CLHC1-207ENST00000428621 IQGAP3Q86VI3 1631 aa11.09□□□□□ -0.63
CLHC1-207ENST00000428621 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
CLHC1-207ENST00000428621 ZBED9Q6R2W3 1325 aa11.08□□□□□ -0.64
CLHC1-207ENST00000428621 HNRNPMP52272 730 aaKnown RBP eCLIP11.08□□□□□ -0.642e-6■■■■□ 25
CLHC1-207ENST00000428621 ERBINQ96RT1 1412 aa11.07□□□□□ -0.64
CLHC1-207ENST00000428621 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
CLHC1-207ENST00000428621 MRS2Q9HD23 443 aa11.07□□□□□ -0.64
CLHC1-207ENST00000428621 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
CLHC1-207ENST00000428621 LAMC1P11047 1609 aa11.06□□□□□ -0.64
CLHC1-207ENST00000428621 ATP10AO60312 1499 aa11.06□□□□□ -0.64
CLHC1-207ENST00000428621 ERCC6L2Q5T890 1561 aa11.06□□□□□ -0.64
CLHC1-207ENST00000428621 CCDC144AA2RUR9 1427 aa11.06□□□□□ -0.64
CLHC1-207ENST00000428621 ARAP3Q8WWN8 1544 aa11.06□□□□□ -0.64
CLHC1-207ENST00000428621 BCANQ96GW7 911 aa11.05□□□□□ -0.64
CLHC1-207ENST00000428621 E9PCH4 1651 aa11.05□□□□□ -0.64
CLHC1-207ENST00000428621 TRPM1Q7Z4N2 1603 aa11.05□□□□□ -0.64
CLHC1-207ENST00000428621 CCDC184Q52MB2 194 aa11.05□□□□□ -0.64
CLHC1-207ENST00000428621 KTN1Q86UP2 1357 aaKnown RBP11.05□□□□□ -0.64
CLHC1-207ENST00000428621 ABCC1P33527 1531 aa11.05□□□□□ -0.64
CLHC1-207ENST00000428621 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
CLHC1-207ENST00000428621 ZCCHC11Q5TAX3 1644 aaKnown RBP11.04□□□□□ -0.64
CLHC1-207ENST00000428621 PLCH2O75038 1416 aa11.04□□□□□ -0.64
CLHC1-207ENST00000428621 GPRASP1Q5JY77 1395 aa11.04□□□□□ -0.64
CLHC1-207ENST00000428621 EIF2AK4Q9P2K8 1649 aaKnown RBP11.04□□□□□ -0.64
CLHC1-207ENST00000428621 ZBTB22O15209 634 aa11.03□□□□□ -0.64
CLHC1-207ENST00000428621 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
CLHC1-207ENST00000428621 PLA2R1Q13018 1463 aa11.03□□□□□ -0.64
CLHC1-207ENST00000428621 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.64
CLHC1-207ENST00000428621 A2MP01023 1474 aa11.01□□□□□ -0.65
CLHC1-207ENST00000428621 PRDM15P57071 1507 aaPredicted RBP11□□□□□ -0.65
CLHC1-207ENST00000428621 FAM9BQ8IZU0 186 aa10.99□□□□□ -0.65
CLHC1-207ENST00000428621 RNF17Q9BXT8 1623 aaKnown RBP10.99□□□□□ -0.65
CLHC1-207ENST00000428621 DCAF11Q8TEB1 546 aa10.99□□□□□ -0.65
CLHC1-207ENST00000428621 RTEL1-TNFRSF6BF6WH68 1400 aa10.98□□□□□ -0.65
CLHC1-207ENST00000428621 SMG6Q86US8 1419 aaKnown RBP10.98□□□□□ -0.65
CLHC1-207ENST00000428621 COL17A1Q9UMD9 1497 aaPredicted RBP10.98□□□□□ -0.65
CLHC1-207ENST00000428621 ZFYVE16Q7Z3T8 1539 aa10.98□□□□□ -0.65
CLHC1-207ENST00000428621 DCAF8L1A6NGE4 600 aa10.97□□□□□ -0.65
CLHC1-207ENST00000428621 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
CLHC1-207ENST00000428621 BRD4O60885 1362 aaPredicted RBP10.97□□□□□ -0.65
CLHC1-207ENST00000428621 EFCAB2Q5VUJ9 269 aa10.97□□□□□ -0.65
CLHC1-207ENST00000428621 DEPDC5O75140 1603 aa10.96□□□□□ -0.65
CLHC1-207ENST00000428621 LRPPRCP42704 1394 aaKnown RBP10.96□□□□□ -0.66
CLHC1-207ENST00000428621 TRPM2O94759 1503 aa10.95□□□□□ -0.66
CLHC1-207ENST00000428621 RALBP1Q15311 655 aa10.95□□□□□ -0.66
CLHC1-207ENST00000428621 TRAPPC8Q9Y2L5 1435 aa10.95□□□□□ -0.66
CLHC1-207ENST00000428621 MYBBP1AQ9BQG0 1328 aaKnown RBP10.94□□□□□ -0.66
CLHC1-207ENST00000428621 ABCA9Q8IUA7 1624 aa10.94□□□□□ -0.66
CLHC1-207ENST00000428621 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
CLHC1-207ENST00000428621 PPP4R2Q9NY27 417 aa10.94□□□□□ -0.66
CLHC1-207ENST00000428621 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
CLHC1-207ENST00000428621 ZMYM4Q5VZL5 1548 aa10.94□□□□□ -0.66
CLHC1-207ENST00000428621 PARD3Q8TEW0 1356 aa10.93□□□□□ -0.66
CLHC1-207ENST00000428621 NEURL4Q96JN8 1562 aa10.93□□□□□ -0.66
CLHC1-207ENST00000428621 PNISRQ8TF01 805 aaKnown RBP10.93□□□□□ -0.66
CLHC1-207ENST00000428621 WDR7Q9Y4E6 1490 aa10.93□□□□□ -0.66
CLHC1-207ENST00000428621 WASHC2CQ9Y4E1 1318 aa10.92□□□□□ -0.66
CLHC1-207ENST00000428621 MADDQ8WXG6 1647 aa10.92□□□□□ -0.66
CLHC1-207ENST00000428621 POLR3GLQ9BT43 218 aa10.92□□□□□ -0.66
CLHC1-207ENST00000428621 VWDEQ8N2E2 1590 aa10.92□□□□□ -0.66
CLHC1-207ENST00000428621 INSRP06213 1382 aa10.92□□□□□ -0.66
CLHC1-207ENST00000428621 RNF123Q5XPI4 1314 aa10.91□□□□□ -0.66
CLHC1-207ENST00000428621 PTPRTO14522 1441 aa10.91□□□□□ -0.66
CLHC1-207ENST00000428621 NUDCQ9Y266 331 aa10.91□□□□□ -0.66
CLHC1-207ENST00000428621 TET3O43151 1660 aa10.91□□□□□ -0.66
CLHC1-207ENST00000428621 CEP152O94986 1710 aa10.9□□□□□ -0.66
CLHC1-207ENST00000428621 SPHKAPQ2M3C7 1700 aa10.9□□□□□ -0.66
CLHC1-207ENST00000428621 ATP7AQ04656 1500 aa10.9□□□□□ -0.66
CLHC1-207ENST00000428621 TMC1Q8TDI8 760 aa10.9□□□□□ -0.66
CLHC1-207ENST00000428621 STAC3Q96MF2 364 aa10.9□□□□□ -0.66
CLHC1-207ENST00000428621 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
CLHC1-207ENST00000428621 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.66
CLHC1-207ENST00000428621 SPAG9O60271 1321 aaKnown RBP10.9□□□□□ -0.66
CLHC1-207ENST00000428621 TESK2Q96S53 571 aa10.89□□□□□ -0.67
CLHC1-207ENST00000428621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLHC1-207ENST00000428621 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
CLHC1-207ENST00000428621 NLRP13Q86W25 1043 aa10.89□□□□□ -0.67
CLHC1-207ENST00000428621 FANCAO15360 1455 aa10.88□□□□□ -0.67
CLHC1-207ENST00000428621 IRX6P78412 446 aaPredicted RBP10.88□□□□□ -0.67
CLHC1-207ENST00000428621 SCAPERQ9BY12 1400 aa10.88□□□□□ -0.67
CLHC1-207ENST00000428621 DISP3Q9P2K9 1392 aa10.88□□□□□ -0.67
CLHC1-207ENST00000428621 SLC4A2P04920 1241 aa10.88□□□□□ -0.67
CLHC1-207ENST00000428621 NBPF1Q3BBV0 1214 aa10.88□□□□□ -0.67
CLHC1-207ENST00000428621 RGL3Q3MIN7 710 aa10.87□□□□□ -0.67
CLHC1-207ENST00000428621 CLTCL1P53675 1640 aa10.87□□□□□ -0.67
CLHC1-207ENST00000428621 PER1O15534 1290 aaPredicted RBP10.86□□□□□ -0.67
CLHC1-207ENST00000428621 KIAA1210Q9ULL0 1709 aa10.86□□□□□ -0.67
CLHC1-207ENST00000428621 MROH1Q8NDA8 1641 aa10.86□□□□□ -0.67
CLHC1-207ENST00000428621 TMF1P82094 1093 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms