RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
C9orf3-206ENST00000428313 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
C9orf3-206ENST00000428313 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
C9orf3-206ENST00000428313 BLMP54132 1417 aaPredicted RBP20.76■□□□□ 0.91
C9orf3-206ENST00000428313 CDCA7LQ96GN5 454 aa20.75■□□□□ 0.91
C9orf3-206ENST00000428313 NLRP13Q86W25 1043 aa20.75■□□□□ 0.91
C9orf3-206ENST00000428313 ANTXR1Q9H6X2 564 aa20.75■□□□□ 0.91
C9orf3-206ENST00000428313 USP19O94966 1318 aa20.75■□□□□ 0.91
C9orf3-206ENST00000428313 FOXD1Q16676 465 aa20.74■□□□□ 0.91
C9orf3-206ENST00000428313 POLR3GLQ9BT43 218 aa20.74■□□□□ 0.91
C9orf3-206ENST00000428313 MRE11P49959 708 aa20.74■□□□□ 0.91
C9orf3-206ENST00000428313 ESPNB1AK53 854 aa20.73■□□□□ 0.91
C9orf3-206ENST00000428313 CHIC2Q9UKJ5 165 aa20.72■□□□□ 0.91
C9orf3-206ENST00000428313 ISY1Q9ULR0 285 aaKnown RBP20.72■□□□□ 0.91
C9orf3-206ENST00000428313 PARD3Q8TEW0 1356 aa20.71■□□□□ 0.91
C9orf3-206ENST00000428313 PRDM4Q9UKN5 801 aa20.71■□□□□ 0.91
C9orf3-206ENST00000428313 PANK2Q9BZ23 570 aa20.7■□□□□ 0.9
C9orf3-206ENST00000428313 C20orf194Q5TEA3 1177 aa20.7■□□□□ 0.9
C9orf3-206ENST00000428313 ROCK1Q13464 1354 aa20.69■□□□□ 0.9
C9orf3-206ENST00000428313 RALGAPBQ86X10 1494 aa20.68■□□□□ 0.9
C9orf3-206ENST00000428313 RBM10P98175 930 aaKnown RBP20.68■□□□□ 0.9
C9orf3-206ENST00000428313 NLRP1Q9C000 1473 aa20.67■□□□□ 0.9
C9orf3-206ENST00000428313 UHRF1BP1Q6BDS2 1440 aa20.66■□□□□ 0.9
C9orf3-206ENST00000428313 SLKQ9H2G2 1235 aaPredicted RBP20.66■□□□□ 0.9
C9orf3-206ENST00000428313 RGS3P49796 1198 aa20.65■□□□□ 0.9
C9orf3-206ENST00000428313 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
C9orf3-206ENST00000428313 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
C9orf3-206ENST00000428313 MCM4P33991 863 aa20.64■□□□□ 0.89
C9orf3-206ENST00000428313 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.64■□□□□ 0.89
C9orf3-206ENST00000428313 AAMPQ13685 434 aa20.64■□□□□ 0.89
C9orf3-206ENST00000428313 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
C9orf3-206ENST00000428313 ERBB4Q15303 1308 aa20.62■□□□□ 0.89
C9orf3-206ENST00000428313 EIF3AQ14152 1382 aaKnown RBP20.62■□□□□ 0.89
C9orf3-206ENST00000428313 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
C9orf3-206ENST00000428313 GRPEL1Q9HAV7 217 aa20.61■□□□□ 0.89
C9orf3-206ENST00000428313 MAP7D2Q96T17 732 aa20.6■□□□□ 0.89
C9orf3-206ENST00000428313 TERF1P54274 439 aa20.6■□□□□ 0.89
C9orf3-206ENST00000428313 SLC4A1APQ9BWU0 796 aaKnown RBP20.59■□□□□ 0.89
C9orf3-206ENST00000428313 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
C9orf3-206ENST00000428313 ARXQ96QS3 562 aa20.58■□□□□ 0.89
C9orf3-206ENST00000428313 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
C9orf3-206ENST00000428313 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
C9orf3-206ENST00000428313 TRIM44Q96DX7 344 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-206ENST00000428313 PZPP20742 1482 aa20.56■□□□□ 0.88
C9orf3-206ENST00000428313 TRAK2O60296 914 aa20.56■□□□□ 0.88
C9orf3-206ENST00000428313 ZMYM3Q14202 1370 aa20.56■□□□□ 0.88
C9orf3-206ENST00000428313 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
C9orf3-206ENST00000428313 ARHGEF12Q9NZN5 1544 aa20.55■□□□□ 0.88
C9orf3-206ENST00000428313 DNMT1P26358 1616 aaKnown RBP20.55■□□□□ 0.88
C9orf3-206ENST00000428313 FGD1P98174 961 aa20.55■□□□□ 0.88
C9orf3-206ENST00000428313 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
C9orf3-206ENST00000428313 DAPK1P53355 1430 aa20.54■□□□□ 0.88
C9orf3-206ENST00000428313 GZF1Q9H116 711 aaPredicted RBP20.53■□□□□ 0.88
C9orf3-206ENST00000428313 NESP48681 1621 aa20.53■□□□□ 0.88
C9orf3-206ENST00000428313 TBC1D2Q9BYX2 928 aa20.53■□□□□ 0.88
C9orf3-206ENST00000428313 KIAA1107Q9UPP5 1409 aa20.52■□□□□ 0.88
C9orf3-206ENST00000428313 SEC24BO95487 1268 aa20.52■□□□□ 0.88
C9orf3-206ENST00000428313 EPRSP07814 1512 aaKnown RBP20.52■□□□□ 0.88
C9orf3-206ENST00000428313 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.88
C9orf3-206ENST00000428313 A0A0U1RQG5 324 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-206ENST00000428313 DDX11L8A8MPP1 907 aa20.51■□□□□ 0.87
C9orf3-206ENST00000428313 TBC1D32Q96NH3 1257 aa20.51■□□□□ 0.87
C9orf3-206ENST00000428313 UPF2Q9HAU5 1272 aaKnown RBP20.51■□□□□ 0.87
C9orf3-206ENST00000428313 CHMP5Q9NZZ3 219 aa20.51■□□□□ 0.87
C9orf3-206ENST00000428313 SMAP1Q8IYB5 467 aaPredicted RBP20.5■□□□□ 0.87
C9orf3-206ENST00000428313 CARD11Q9BXL7 1154 aa20.5■□□□□ 0.87
C9orf3-206ENST00000428313 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
C9orf3-206ENST00000428313 OFD1O75665 1012 aa20.48■□□□□ 0.87
C9orf3-206ENST00000428313 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
C9orf3-206ENST00000428313 WDR62O43379 1518 aa20.48■□□□□ 0.87
C9orf3-206ENST00000428313 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.47■□□□□ 0.87
C9orf3-206ENST00000428313 IQGAP2Q13576 1575 aa20.47■□□□□ 0.87
C9orf3-206ENST00000428313 ST20-MTHFSA0A0A6YYL1 179 aa20.46■□□□□ 0.87
C9orf3-206ENST00000428313 PER1O15534 1290 aaPredicted RBP20.46■□□□□ 0.87
C9orf3-206ENST00000428313 ZNF521Q96K83 1311 aa20.46■□□□□ 0.87
C9orf3-206ENST00000428313 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
C9orf3-206ENST00000428313 MTERF4Q7Z6M4 381 aaKnown RBP20.45■□□□□ 0.86
C9orf3-206ENST00000428313 ABCC5O15440 1437 aa20.45■□□□□ 0.86
C9orf3-206ENST00000428313 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
C9orf3-206ENST00000428313 RIPK4P57078 832 aa20.44■□□□□ 0.86
C9orf3-206ENST00000428313 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
C9orf3-206ENST00000428313 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
C9orf3-206ENST00000428313 CCDC173Q0VFZ6 552 aa20.42■□□□□ 0.86
C9orf3-206ENST00000428313 ZSCAN30Q86W11 494 aa20.42■□□□□ 0.86
C9orf3-206ENST00000428313 PLEKHH1Q9ULM0 1364 aa20.42■□□□□ 0.86
C9orf3-206ENST00000428313 IGHDP01880 384 aa20.42■□□□□ 0.86
C9orf3-206ENST00000428313 NINLQ9Y2I6 1382 aa20.41■□□□□ 0.86
C9orf3-206ENST00000428313 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
C9orf3-206ENST00000428313 PPP1R9BQ96SB3 815 aa20.41■□□□□ 0.86
C9orf3-206ENST00000428313 CGNL1Q0VF96 1302 aa20.41■□□□□ 0.86
C9orf3-206ENST00000428313 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
C9orf3-206ENST00000428313 ADGBQ8N7X0 1667 aa20.39■□□□□ 0.85
C9orf3-206ENST00000428313 PTMSP20962 102 aa20.38■□□□□ 0.85
C9orf3-206ENST00000428313 TRMT2AQ8IZ69 625 aaKnown RBP20.37■□□□□ 0.85
C9orf3-206ENST00000428313 SLFN5Q08AF3 891 aa20.37■□□□□ 0.85
C9orf3-206ENST00000428313 SKOR2Q2VWA4 1001 aaPredicted RBP20.37■□□□□ 0.85
C9orf3-206ENST00000428313 UTP14CQ5TAP6 766 aaKnown RBP20.37■□□□□ 0.85
C9orf3-206ENST00000428313 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
C9orf3-206ENST00000428313 NKTRP30414 1462 aaKnown RBP20.36■□□□□ 0.85
C9orf3-206ENST00000428313 PDE3AQ14432 1141 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms