RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 HNRNPUQ00839 825 aaKnown RBP eCLIP27.67■■■□□ 2.02
PMPCB-202ENST00000428154 RTEL1-TNFRSF6BF6WH68 1400 aa27.67■■■□□ 2.02
PMPCB-202ENST00000428154 CARD11Q9BXL7 1154 aa27.66■■■□□ 2.02
PMPCB-202ENST00000428154 ZNF326Q5BKZ1 582 aaKnown RBP27.64■■■□□ 2.02
PMPCB-202ENST00000428154 FKBP8Q14318 412 aa27.64■■■□□ 2.01
PMPCB-202ENST00000428154 LAMC1P11047 1609 aa27.63■■■□□ 2.01
PMPCB-202ENST00000428154 DHX29Q7Z478 1369 aaKnown RBP27.61■■■□□ 2.01
PMPCB-202ENST00000428154 TRPM1Q7Z4N2 1603 aa27.61■■■□□ 2.01
PMPCB-202ENST00000428154 DCAF11Q8TEB1 546 aa27.61■■■□□ 2.01
PMPCB-202ENST00000428154 PRAG1Q86YV5 1406 aa27.6■■■□□ 2.01
PMPCB-202ENST00000428154 EIF2AK4Q9P2K8 1649 aaKnown RBP27.6■■■□□ 2.01
PMPCB-202ENST00000428154 KTN1Q86UP2 1357 aaKnown RBP27.59■■■□□ 2.01
PMPCB-202ENST00000428154 MRS2Q9HD23 443 aa27.59■■■□□ 2.01
PMPCB-202ENST00000428154 PLA2R1Q13018 1463 aa27.58■■■□□ 2.01
PMPCB-202ENST00000428154 GPRASP1Q5JY77 1395 aa27.57■■■□□ 2
PMPCB-202ENST00000428154 WDR7Q9Y4E6 1490 aa27.56■■■□□ 2
PMPCB-202ENST00000428154 ERICH6BQ5W0A0 696 aa27.55■■■□□ 2
PMPCB-202ENST00000428154 ZBED9Q6R2W3 1325 aa27.54■■■□□ 2
PMPCB-202ENST00000428154 KDM2AQ9Y2K7 1162 aa27.53■■■□□ 2
PMPCB-202ENST00000428154 ABCA9Q8IUA7 1624 aa27.52■■■□□ 2
PMPCB-202ENST00000428154 TRAPPC8Q9Y2L5 1435 aa27.52■■■□□ 2
PMPCB-202ENST00000428154 A2MP01023 1474 aa27.51■■□□□ 1.99
PMPCB-202ENST00000428154 SPAG9O60271 1321 aaKnown RBP27.5■■□□□ 1.99
PMPCB-202ENST00000428154 STAC3Q96MF2 364 aa27.5■■□□□ 1.99
PMPCB-202ENST00000428154 ZFYVE16Q7Z3T8 1539 aa27.5■■□□□ 1.99
PMPCB-202ENST00000428154 CCDC184Q52MB2 194 aa27.49■■□□□ 1.99
PMPCB-202ENST00000428154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.49■■□□□ 1.992e-6■■□□□ 13.3
PMPCB-202ENST00000428154 E9PCH4 1651 aa27.48■■□□□ 1.99
PMPCB-202ENST00000428154 DEPDC5O75140 1603 aa27.48■■□□□ 1.99
PMPCB-202ENST00000428154 ST20-MTHFSA0A0A6YYL1 179 aa27.47■■□□□ 1.99
PMPCB-202ENST00000428154 PRDM15P57071 1507 aaPredicted RBP27.46■■□□□ 1.99
PMPCB-202ENST00000428154 FAM9BQ8IZU0 186 aa27.44■■□□□ 1.98
PMPCB-202ENST00000428154 INO80Q9ULG1 1556 aaPredicted RBP27.43■■□□□ 1.98
PMPCB-202ENST00000428154 RALBP1Q15311 655 aa27.42■■□□□ 1.98
PMPCB-202ENST00000428154 FANCAO15360 1455 aa27.42■■□□□ 1.98
PMPCB-202ENST00000428154 TRPM2O94759 1503 aa27.41■■□□□ 1.98
PMPCB-202ENST00000428154 ATP7AQ04656 1500 aa27.4■■□□□ 1.98
PMPCB-202ENST00000428154 TET3O43151 1660 aa27.39■■□□□ 1.98
PMPCB-202ENST00000428154 NEURL4Q96JN8 1562 aa27.39■■□□□ 1.98
PMPCB-202ENST00000428154 PTPRTO14522 1441 aa27.39■■□□□ 1.97
PMPCB-202ENST00000428154 POLR3GLQ9BT43 218 aa27.38■■□□□ 1.97
PMPCB-202ENST00000428154 RNF17Q9BXT8 1623 aaKnown RBP27.38■■□□□ 1.97
PMPCB-202ENST00000428154 KANK1Q14678 1352 aa27.37■■□□□ 1.97
PMPCB-202ENST00000428154 WASHC2CQ9Y4E1 1318 aa27.37■■□□□ 1.97
PMPCB-202ENST00000428154 VWDEQ8N2E2 1590 aa27.37■■□□□ 1.97
PMPCB-202ENST00000428154 SPHKAPQ2M3C7 1700 aa27.36■■□□□ 1.97
PMPCB-202ENST00000428154 BRD4O60885 1362 aaPredicted RBP27.36■■□□□ 1.97
PMPCB-202ENST00000428154 CEP152O94986 1710 aa27.36■■□□□ 1.97
PMPCB-202ENST00000428154 RGL3Q3MIN7 710 aa27.36■■□□□ 1.97
PMPCB-202ENST00000428154 BCANQ96GW7 911 aa27.35■■□□□ 1.97
PMPCB-202ENST00000428154 TSHZ2Q9NRE2 1034 aa27.35■■□□□ 1.97
PMPCB-202ENST00000428154 COL17A1Q9UMD9 1497 aaPredicted RBP27.35■■□□□ 1.97
PMPCB-202ENST00000428154 ADGRL1O94910 1474 aa27.33■■□□□ 1.97
PMPCB-202ENST00000428154 MYBBP1AQ9BQG0 1328 aaKnown RBP27.33■■□□□ 1.96
PMPCB-202ENST00000428154 AFAP1Q8N556 730 aa27.32■■□□□ 1.96
PMPCB-202ENST00000428154 ASXL2Q76L83 1435 aa27.31■■□□□ 1.96
PMPCB-202ENST00000428154 CFAP74Q9C0B2 1584 aa27.29■■□□□ 1.96
PMPCB-202ENST00000428154 TMC1Q8TDI8 760 aa27.29■■□□□ 1.96
PMPCB-202ENST00000428154 SMG6Q86US8 1419 aaKnown RBP27.28■■□□□ 1.96
PMPCB-202ENST00000428154 SCAPERQ9BY12 1400 aa27.28■■□□□ 1.96
PMPCB-202ENST00000428154 MADDQ8WXG6 1647 aa27.27■■□□□ 1.96
PMPCB-202ENST00000428154 NBPF1Q3BBV0 1214 aa27.27■■□□□ 1.96
PMPCB-202ENST00000428154 PNISRQ8TF01 805 aaKnown RBP27.27■■□□□ 1.96
PMPCB-202ENST00000428154 LRPPRCP42704 1394 aaKnown RBP27.25■■□□□ 1.95
PMPCB-202ENST00000428154 KIAA1210Q9ULL0 1709 aa27.24■■□□□ 1.95
PMPCB-202ENST00000428154 TMF1P82094 1093 aa27.24■■□□□ 1.95
PMPCB-202ENST00000428154 TESK2Q96S53 571 aa27.24■■□□□ 1.95
PMPCB-202ENST00000428154 PARD3Q8TEW0 1356 aa27.23■■□□□ 1.95
PMPCB-202ENST00000428154 IQGAP1P46940 1657 aa27.22■■□□□ 1.95
PMPCB-202ENST00000428154 ZNF518AQ6AHZ1 1483 aa27.22■■□□□ 1.95
PMPCB-202ENST00000428154 INSRP06213 1382 aa27.22■■□□□ 1.95
PMPCB-202ENST00000428154 CLTCL1P53675 1640 aa27.22■■□□□ 1.95
PMPCB-202ENST00000428154 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
PMPCB-202ENST00000428154 MYT1Q01538 1121 aa27.2■■□□□ 1.94
PMPCB-202ENST00000428154 NLRP13Q86W25 1043 aa27.2■■□□□ 1.94
PMPCB-202ENST00000428154 ZMYM4Q5VZL5 1548 aa27.2■■□□□ 1.94
PMPCB-202ENST00000428154 SLC24A1O60721 1099 aa27.19■■□□□ 1.94
PMPCB-202ENST00000428154 PPP4R2Q9NY27 417 aa27.19■■□□□ 1.94
PMPCB-202ENST00000428154 LMTK2Q8IWU2 1503 aa27.19■■□□□ 1.94
PMPCB-202ENST00000428154 OSCARQ8IYS5 282 aa27.19■■□□□ 1.94
PMPCB-202ENST00000428154 PER1O15534 1290 aaPredicted RBP27.18■■□□□ 1.94
PMPCB-202ENST00000428154 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
PMPCB-202ENST00000428154 CDCA8Q53HL2 280 aa27.17■■□□□ 1.94
PMPCB-202ENST00000428154 NUDCQ9Y266 331 aa27.17■■□□□ 1.94
PMPCB-202ENST00000428154 KIDINS220Q9ULH0 1771 aa27.17■■□□□ 1.94
PMPCB-202ENST00000428154 SCAF11Q99590 1463 aaKnown RBP27.15■■□□□ 1.94
PMPCB-202ENST00000428154 KIF3BO15066 747 aa27.14■■□□□ 1.94
PMPCB-202ENST00000428154 EFCAB6Q5THR3 1501 aa27.14■■□□□ 1.94
PMPCB-202ENST00000428154 DISP3Q9P2K9 1392 aa27.14■■□□□ 1.94
PMPCB-202ENST00000428154 MYOM2P54296 1465 aa27.13■■□□□ 1.93
PMPCB-202ENST00000428154 EIF3AQ14152 1382 aaKnown RBP27.12■■□□□ 1.93
PMPCB-202ENST00000428154 KIF1BO60333 1816 aa27.12■■□□□ 1.93
PMPCB-202ENST00000428154 MLH3Q9UHC1 1453 aa27.1■■□□□ 1.93
PMPCB-202ENST00000428154 MYT1LQ9UL68 1186 aa27.1■■□□□ 1.93
PMPCB-202ENST00000428154 RNF123Q5XPI4 1314 aa27.09■■□□□ 1.93
PMPCB-202ENST00000428154 CD109Q6YHK3 1445 aa27.07■■□□□ 1.92
PMPCB-202ENST00000428154 POGZQ7Z3K3 1410 aa27.06■■□□□ 1.92
PMPCB-202ENST00000428154 MAP3K4Q9Y6R4 1608 aa27.06■■□□□ 1.92
PMPCB-202ENST00000428154 SYNMO15061 1565 aa27.06■■□□□ 1.92
PMPCB-202ENST00000428154 PDE3BQ13370 1112 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms