RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 DNMT1P26358 1616 aaKnown RBP31.82■■■□□ 2.69
HSPG2-205ENST00000427897 KDM5DQ9BY66 1539 aa31.82■■■□□ 2.68
HSPG2-205ENST00000427897 DUOX2Q9NRD8 1548 aa31.82■■■□□ 2.68
HSPG2-205ENST00000427897 DMRT2Q9Y5R5 561 aa31.82■■■□□ 2.68
HSPG2-205ENST00000427897 SHANK2Q9UPX8 1470 aa31.82■■■□□ 2.68
HSPG2-205ENST00000427897 KIF15Q9NS87 1388 aa31.81■■■□□ 2.68
HSPG2-205ENST00000427897 PPARGC1BQ86YN6 1023 aaKnown RBP31.81■■■□□ 2.68
HSPG2-205ENST00000427897 PTPRKQ15262 1439 aa31.79■■■□□ 2.68
HSPG2-205ENST00000427897 FAM135AQ9P2D6 1515 aa31.79■■■□□ 2.68
HSPG2-205ENST00000427897 ANKRD30AQ9BXX3 1397 aa31.78■■■□□ 2.68
HSPG2-205ENST00000427897 EIF2AK4Q9P2K8 1649 aaKnown RBP31.78■■■□□ 2.68
HSPG2-205ENST00000427897 RNF17Q9BXT8 1623 aaKnown RBP31.72■■■□□ 2.67
HSPG2-205ENST00000427897 FBXO31Q5XUX0 539 aaPredicted RBP31.72■■■□□ 2.67
HSPG2-205ENST00000427897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.72■■■□□ 2.67
HSPG2-205ENST00000427897 ERBINQ96RT1 1412 aa31.7■■■□□ 2.67
HSPG2-205ENST00000427897 MYO3AQ8NEV4 1616 aa31.7■■■□□ 2.66
HSPG2-205ENST00000427897 ILDR1Q86SU0 546 aaPredicted RBP31.69■■■□□ 2.66
HSPG2-205ENST00000427897 PZPP20742 1482 aa31.69■■■□□ 2.66
HSPG2-205ENST00000427897 TNRQ92752 1358 aa31.68■■■□□ 2.66
HSPG2-205ENST00000427897 STRCQ7RTU9 1775 aa31.68■■■□□ 2.66
HSPG2-205ENST00000427897 ZC3H13Q5T200 1668 aaKnown RBP31.67■■■□□ 2.66
HSPG2-205ENST00000427897 CAMSAP1Q5T5Y3 1602 aa31.66■■■□□ 2.66
HSPG2-205ENST00000427897 KANK1Q14678 1352 aa31.66■■■□□ 2.66
HSPG2-205ENST00000427897 CEP170BQ9Y4F5 1589 aaPredicted RBP31.64■■■□□ 2.66
HSPG2-205ENST00000427897 NCOA1Q15788 1441 aa31.64■■■□□ 2.66
HSPG2-205ENST00000427897 ABCC3O15438 1527 aa31.63■■■□□ 2.65
HSPG2-205ENST00000427897 ZNF142P52746 1687 aaPredicted RBP31.62■■■□□ 2.65
HSPG2-205ENST00000427897 CEP152O94986 1710 aa31.61■■■□□ 2.65
HSPG2-205ENST00000427897 ITGAEP38570 1179 aa31.6■■■□□ 2.65
HSPG2-205ENST00000427897 A2ML1A8K2U0 1454 aa31.59■■■□□ 2.65
HSPG2-205ENST00000427897 NCKAP5LQ9HCH0 1330 aa31.59■■■□□ 2.65
HSPG2-205ENST00000427897 MROH1Q8NDA8 1641 aa31.58■■■□□ 2.65
HSPG2-205ENST00000427897 PTPRTO14522 1441 aa31.58■■■□□ 2.65
HSPG2-205ENST00000427897 ADGRL2O95490 1459 aa31.57■■■□□ 2.64
HSPG2-205ENST00000427897 PKD2Q13563 968 aa31.56■■■□□ 2.64
HSPG2-205ENST00000427897 FBXO41Q8TF61 875 aa31.54■■■□□ 2.64
HSPG2-205ENST00000427897 PRDM15P57071 1507 aaPredicted RBP31.54■■■□□ 2.64
HSPG2-205ENST00000427897 THEMISQ8N1K5 641 aaPredicted RBP31.53■■■□□ 2.64
HSPG2-205ENST00000427897 CFAP65Q6ZU64 1925 aaKnown RBP31.53■■■□□ 2.64
HSPG2-205ENST00000427897 CERKQ8TCT0 537 aa31.52■■■□□ 2.64
HSPG2-205ENST00000427897 NLRP1Q9C000 1473 aa31.52■■■□□ 2.64
HSPG2-205ENST00000427897 PLA2R1Q13018 1463 aa31.51■■■□□ 2.63
HSPG2-205ENST00000427897 ANKRD50Q9ULJ7 1429 aa31.49■■■□□ 2.63
HSPG2-205ENST00000427897 DEPDC5O75140 1603 aa31.49■■■□□ 2.63
HSPG2-205ENST00000427897 ERVK-7P63135 1459 aa31.47■■■□□ 2.63
HSPG2-205ENST00000427897 SPATA31D1Q6ZQQ2 1576 aa31.46■■■□□ 2.63
HSPG2-205ENST00000427897 UGGT1Q9NYU2 1555 aa31.46■■■□□ 2.63
HSPG2-205ENST00000427897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.44■■■□□ 2.62
HSPG2-205ENST00000427897 ANKLE2Q86XL3 938 aa31.44■■■□□ 2.62
HSPG2-205ENST00000427897 ARHGAP31Q2M1Z3 1444 aa31.43■■■□□ 2.62
HSPG2-205ENST00000427897 ROCK1Q13464 1354 aa31.42■■■□□ 2.62
HSPG2-205ENST00000427897 STAG3Q9UJ98 1225 aa31.39■■■□□ 2.62
HSPG2-205ENST00000427897 POLR1AO95602 1720 aaPredicted RBP31.35■■■□□ 2.61
HSPG2-205ENST00000427897 LMTK2Q8IWU2 1503 aa31.35■■■□□ 2.61
HSPG2-205ENST00000427897 VWDEQ8N2E2 1590 aa31.34■■■□□ 2.61
HSPG2-205ENST00000427897 RRBP1Q9P2E9 1410 aaKnown RBP31.3■■■□□ 2.6
HSPG2-205ENST00000427897 ZNF335Q9H4Z2 1342 aaPredicted RBP31.29■■■□□ 2.6
HSPG2-205ENST00000427897 EFCAB6Q5THR3 1501 aa31.28■■■□□ 2.6
HSPG2-205ENST00000427897 UBR1Q8IWV7 1749 aa31.26■■■□□ 2.59
HSPG2-205ENST00000427897 EID1Q9Y6B2 187 aa31.25■■■□□ 2.59
HSPG2-205ENST00000427897 UNC13BO14795 1591 aa31.24■■■□□ 2.59
HSPG2-205ENST00000427897 LTBP4Q8N2S1 1624 aa31.24■■■□□ 2.59
HSPG2-205ENST00000427897 NPHP4O75161 1426 aaPredicted RBP31.24■■■□□ 2.59
HSPG2-205ENST00000427897 NUP155O75694 1391 aa31.23■■■□□ 2.59
HSPG2-205ENST00000427897 IDI1Q13907 227 aa31.23■■■□□ 2.59
HSPG2-205ENST00000427897 TXNDC2Q86VQ3 553 aa31.22■■■□□ 2.59
HSPG2-205ENST00000427897 TET3O43151 1660 aa31.22■■■□□ 2.59
HSPG2-205ENST00000427897 NEURL4Q96JN8 1562 aa31.22■■■□□ 2.59
HSPG2-205ENST00000427897 RPRD2Q5VT52 1461 aaKnown RBP31.21■■■□□ 2.59
HSPG2-205ENST00000427897 PIK3C2BO00750 1634 aa31.21■■■□□ 2.59
HSPG2-205ENST00000427897 SLC52A1Q9NWF4 448 aa31.21■■■□□ 2.59
HSPG2-205ENST00000427897 GCC2Q8IWJ2 1684 aa31.19■■■□□ 2.58
HSPG2-205ENST00000427897 NOS1P29475 1434 aa31.17■■■□□ 2.58
HSPG2-205ENST00000427897 MED14O60244 1454 aa31.17■■■□□ 2.58
HSPG2-205ENST00000427897 SYNMO15061 1565 aa31.16■■■□□ 2.58
HSPG2-205ENST00000427897 IQGAP1P46940 1657 aa31.16■■■□□ 2.58
HSPG2-205ENST00000427897 SCAF11Q99590 1463 aaKnown RBP31.14■■■□□ 2.58
HSPG2-205ENST00000427897 IQGAP3Q86VI3 1631 aa31.13■■■□□ 2.57
HSPG2-205ENST00000427897 IQSEC2Q5JU85 1478 aa31.13■■■□□ 2.57
HSPG2-205ENST00000427897 CHGAP10645 457 aaKnown RBP31.12■■■□□ 2.57
HSPG2-205ENST00000427897 SLIT1O75093 1534 aa31.11■■■□□ 2.57
HSPG2-205ENST00000427897 LTKP29376 864 aa31.11■■■□□ 2.57
HSPG2-205ENST00000427897 TMEM2Q9UHN6 1383 aa31.11■■■□□ 2.57
HSPG2-205ENST00000427897 KDM5AP29375 1690 aaKnown RBP31.09■■■□□ 2.57
HSPG2-205ENST00000427897 BCANQ96GW7 911 aa31.09■■■□□ 2.57
HSPG2-205ENST00000427897 ARHGAP23Q9P227 1491 aa31.08■■■□□ 2.57
HSPG2-205ENST00000427897 TRIM52Q96A61 297 aa31.08■■■□□ 2.57
HSPG2-205ENST00000427897 E9PCH4 1651 aa31.08■■■□□ 2.57
HSPG2-205ENST00000427897 HDGFP51858 240 aaKnown RBP31.07■■■□□ 2.56
HSPG2-205ENST00000427897 ADGRB3O60242 1522 aa31.06■■■□□ 2.56
HSPG2-205ENST00000427897 NAIPQ13075 1403 aa31.06■■■□□ 2.56
HSPG2-205ENST00000427897 CPS1P31327 1500 aa31.05■■■□□ 2.56
HSPG2-205ENST00000427897 UBAP1LF5GYI3 381 aa31.05■■■□□ 2.56
HSPG2-205ENST00000427897 PPP1R15AO75807 674 aaPredicted RBP31.01■■■□□ 2.55
HSPG2-205ENST00000427897 HFM1A2PYH4 1435 aa30.98■■■□□ 2.55
HSPG2-205ENST00000427897 SENP3Q9H4L4 574 aaPredicted RBP30.95■■■□□ 2.55
HSPG2-205ENST00000427897 MYO5BQ9ULV0 1848 aa30.94■■■□□ 2.54
HSPG2-205ENST00000427897 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.94■■■□□ 2.54
HSPG2-205ENST00000427897 SCAF1Q9H7N4 1312 aaKnown RBP30.94■■■□□ 2.54
HSPG2-205ENST00000427897 TOM1O60784 492 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms