RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 SHANK2Q9UPX8 1470 aa23.52■■□□□ 1.36
PHF1-204ENST00000427826 FBXO41Q8TF61 875 aa23.52■■□□□ 1.36
PHF1-204ENST00000427826 DUOX2Q9NRD8 1548 aa23.49■■□□□ 1.35
PHF1-204ENST00000427826 PTPRTO14522 1441 aa23.49■■□□□ 1.35
PHF1-204ENST00000427826 DAPK1P53355 1430 aa23.49■■□□□ 1.35
PHF1-204ENST00000427826 STRCQ7RTU9 1775 aa23.48■■□□□ 1.35
PHF1-204ENST00000427826 KIF15Q9NS87 1388 aa23.48■■□□□ 1.35
PHF1-204ENST00000427826 NCOA1Q15788 1441 aa23.48■■□□□ 1.35
PHF1-204ENST00000427826 PZPP20742 1482 aa23.48■■□□□ 1.35
PHF1-204ENST00000427826 RRP7BPQ9NSQ0 103 aa23.47■■□□□ 1.35
PHF1-204ENST00000427826 EIF2AK4Q9P2K8 1649 aaKnown RBP23.47■■□□□ 1.35
PHF1-204ENST00000427826 RNF17Q9BXT8 1623 aaKnown RBP23.45■■□□□ 1.34
PHF1-204ENST00000427826 TNRQ92752 1358 aa23.45■■□□□ 1.34
PHF1-204ENST00000427826 FBXO31Q5XUX0 539 aaPredicted RBP23.45■■□□□ 1.34
PHF1-204ENST00000427826 MYO3AQ8NEV4 1616 aa23.44■■□□□ 1.34
PHF1-204ENST00000427826 CERKQ8TCT0 537 aa23.44■■□□□ 1.34
PHF1-204ENST00000427826 DNMT1P26358 1616 aaKnown RBP23.44■■□□□ 1.34
PHF1-204ENST00000427826 CAMSAP1Q5T5Y3 1602 aa23.44■■□□□ 1.34
PHF1-204ENST00000427826 ERBINQ96RT1 1412 aa23.43■■□□□ 1.34
PHF1-204ENST00000427826 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
PHF1-204ENST00000427826 PKD2Q13563 968 aa23.43■■□□□ 1.34
PHF1-204ENST00000427826 CEP170BQ9Y4F5 1589 aaPredicted RBP23.43■■□□□ 1.34
PHF1-204ENST00000427826 CROCC2H7BZ55 1655 aa23.42■■□□□ 1.34
PHF1-204ENST00000427826 FAM50AQ14320 339 aaKnown RBP23.42■■□□□ 1.34
PHF1-204ENST00000427826 A2ML1A8K2U0 1454 aa23.42■■□□□ 1.34
PHF1-204ENST00000427826 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
PHF1-204ENST00000427826 CHIC2Q9UKJ5 165 aa23.41■■□□□ 1.34
PHF1-204ENST00000427826 PLA2R1Q13018 1463 aa23.41■■□□□ 1.34
PHF1-204ENST00000427826 ABCC3O15438 1527 aa23.4■■□□□ 1.34
PHF1-204ENST00000427826 NCKAP5LQ9HCH0 1330 aa23.39■■□□□ 1.34
PHF1-204ENST00000427826 ZC3H13Q5T200 1668 aaKnown RBP23.38■■□□□ 1.33
PHF1-204ENST00000427826 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
PHF1-204ENST00000427826 THEMISQ8N1K5 641 aaPredicted RBP23.35■■□□□ 1.33
PHF1-204ENST00000427826 KANK1Q14678 1352 aa23.35■■□□□ 1.33
PHF1-204ENST00000427826 MROH1Q8NDA8 1641 aa23.34■■□□□ 1.33
PHF1-204ENST00000427826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.33■■□□□ 1.33
PHF1-204ENST00000427826 ADGRL2O95490 1459 aa23.32■■□□□ 1.32
PHF1-204ENST00000427826 PRDM15P57071 1507 aaPredicted RBP23.31■■□□□ 1.32
PHF1-204ENST00000427826 ARHGAP31Q2M1Z3 1444 aa23.3■■□□□ 1.32
PHF1-204ENST00000427826 ERVK-7P63135 1459 aa23.29■■□□□ 1.32
PHF1-204ENST00000427826 SPATA31D1Q6ZQQ2 1576 aa23.28■■□□□ 1.32
PHF1-204ENST00000427826 ANKLE2Q86XL3 938 aa23.28■■□□□ 1.32
PHF1-204ENST00000427826 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
PHF1-204ENST00000427826 DEPDC5O75140 1603 aa23.26■■□□□ 1.31
PHF1-204ENST00000427826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
PHF1-204ENST00000427826 CEP152O94986 1710 aa23.25■■□□□ 1.31
PHF1-204ENST00000427826 ANKRD50Q9ULJ7 1429 aa23.24■■□□□ 1.31
PHF1-204ENST00000427826 LTBP4Q8N2S1 1624 aa23.22■■□□□ 1.31
PHF1-204ENST00000427826 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
PHF1-204ENST00000427826 LMTK2Q8IWU2 1503 aa23.21■■□□□ 1.31
PHF1-204ENST00000427826 ROCK1Q13464 1354 aa23.2■■□□□ 1.3
PHF1-204ENST00000427826 ZNF335Q9H4Z2 1342 aaPredicted RBP23.2■■□□□ 1.3
PHF1-204ENST00000427826 IQSEC2Q5JU85 1478 aa23.19■■□□□ 1.3
PHF1-204ENST00000427826 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
PHF1-204ENST00000427826 POLR1AO95602 1720 aaPredicted RBP23.15■■□□□ 1.3
PHF1-204ENST00000427826 MED14O60244 1454 aa23.15■■□□□ 1.3
PHF1-204ENST00000427826 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.3
PHF1-204ENST00000427826 ITGAEP38570 1179 aa23.14■■□□□ 1.29
PHF1-204ENST00000427826 NPHP4O75161 1426 aaPredicted RBP23.14■■□□□ 1.29
PHF1-204ENST00000427826 CFAP65Q6ZU64 1925 aaKnown RBP23.14■■□□□ 1.29
PHF1-204ENST00000427826 STAG3Q9UJ98 1225 aa23.13■■□□□ 1.29
PHF1-204ENST00000427826 EFCAB6Q5THR3 1501 aa23.11■■□□□ 1.29
PHF1-204ENST00000427826 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
PHF1-204ENST00000427826 EID1Q9Y6B2 187 aa23.1■■□□□ 1.29
PHF1-204ENST00000427826 IDI1Q13907 227 aa23.09■■□□□ 1.29
PHF1-204ENST00000427826 RPRD2Q5VT52 1461 aaKnown RBP23.09■■□□□ 1.29
PHF1-204ENST00000427826 UBR1Q8IWV7 1749 aa23.08■■□□□ 1.29
PHF1-204ENST00000427826 TXNDC2Q86VQ3 553 aa23.08■■□□□ 1.29
PHF1-204ENST00000427826 NOS1P29475 1434 aa23.08■■□□□ 1.28
PHF1-204ENST00000427826 ARHGAP23Q9P227 1491 aa23.06■■□□□ 1.28
PHF1-204ENST00000427826 SLIT1O75093 1534 aa23.06■■□□□ 1.28
PHF1-204ENST00000427826 RRBP1Q9P2E9 1410 aaKnown RBP23.06■■□□□ 1.28
PHF1-204ENST00000427826 SCAF11Q99590 1463 aaKnown RBP23.05■■□□□ 1.28
PHF1-204ENST00000427826 CPS1P31327 1500 aa23.05■■□□□ 1.28
PHF1-204ENST00000427826 TMEM2Q9UHN6 1383 aa23.04■■□□□ 1.28
PHF1-204ENST00000427826 LTKP29376 864 aa23.04■■□□□ 1.28
PHF1-204ENST00000427826 IQGAP1P46940 1657 aa23.03■■□□□ 1.28
PHF1-204ENST00000427826 UNC13BO14795 1591 aa23.03■■□□□ 1.28
PHF1-204ENST00000427826 UBAP1LF5GYI3 381 aa23.03■■□□□ 1.28
PHF1-204ENST00000427826 PIK3C2BO00750 1634 aa23.02■■□□□ 1.28
PHF1-204ENST00000427826 TET3O43151 1660 aa23.02■■□□□ 1.28
PHF1-204ENST00000427826 NUP155O75694 1391 aa23.01■■□□□ 1.27
PHF1-204ENST00000427826 SYNMO15061 1565 aa23.01■■□□□ 1.27
PHF1-204ENST00000427826 KDM5AP29375 1690 aaKnown RBP23.01■■□□□ 1.27
PHF1-204ENST00000427826 HDGFP51858 240 aaKnown RBP22.96■■□□□ 1.27
PHF1-204ENST00000427826 GCC2Q8IWJ2 1684 aa22.96■■□□□ 1.27
PHF1-204ENST00000427826 ADGRB3O60242 1522 aa22.95■■□□□ 1.26
PHF1-204ENST00000427826 TOM1O60784 492 aa22.95■■□□□ 1.26
PHF1-204ENST00000427826 IQGAP3Q86VI3 1631 aa22.95■■□□□ 1.26
PHF1-204ENST00000427826 NAIPQ13075 1403 aa22.89■■□□□ 1.25
PHF1-204ENST00000427826 E9PCH4 1651 aa22.88■■□□□ 1.25
PHF1-204ENST00000427826 CHGAP10645 457 aaKnown RBP22.88■■□□□ 1.25
PHF1-204ENST00000427826 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.87■■□□□ 1.25
PHF1-204ENST00000427826 BCANQ96GW7 911 aa22.87■■□□□ 1.25
PHF1-204ENST00000427826 LRRC7Q96NW7 1537 aa22.87■■□□□ 1.25
PHF1-204ENST00000427826 PPP1R15AO75807 674 aaPredicted RBP22.86■■□□□ 1.25
PHF1-204ENST00000427826 SLC26A8Q96RN1 970 aa22.85■■□□□ 1.25
PHF1-204ENST00000427826 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
PHF1-204ENST00000427826 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
PHF1-204ENST00000427826 ZFYVE9O95405 1425 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms