RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 UBAP1LF5GYI3 381 aa27.19■■□□□ 1.94
PSMD4-203ENST00000427779 POLR1AO95602 1720 aaPredicted RBP27.18■■□□□ 1.94
PSMD4-203ENST00000427779 KDM5DQ9BY66 1539 aa27.17■■□□□ 1.94
PSMD4-203ENST00000427779 RSPH4AQ5TD94 716 aa27.16■■□□□ 1.94
PSMD4-203ENST00000427779 CAMSAP2Q08AD1 1489 aa27.16■■□□□ 1.94
PSMD4-203ENST00000427779 KIF3BO15066 747 aa27.15■■□□□ 1.94
PSMD4-203ENST00000427779 PZPP20742 1482 aa27.14■■□□□ 1.94
PSMD4-203ENST00000427779 NCOA2Q15596 1464 aa27.14■■□□□ 1.94
PSMD4-203ENST00000427779 TNRQ92752 1358 aa27.14■■□□□ 1.94
PSMD4-203ENST00000427779 WASHC2CQ9Y4E1 1318 aa27.09■■□□□ 1.93
PSMD4-203ENST00000427779 ARHGEF5Q12774 1597 aa27.09■■□□□ 1.93
PSMD4-203ENST00000427779 NEURL4Q96JN8 1562 aa27.08■■□□□ 1.93
PSMD4-203ENST00000427779 CPS1P31327 1500 aa27.07■■□□□ 1.92
PSMD4-203ENST00000427779 FBXO31Q5XUX0 539 aaPredicted RBP27.07■■□□□ 1.92
PSMD4-203ENST00000427779 TSPY4P0CV99 314 aa27.04■■□□□ 1.92
PSMD4-203ENST00000427779 TSPY10P0CW01 314 aa27.04■■□□□ 1.92
PSMD4-203ENST00000427779 NLRP1Q9C000 1473 aa27.04■■□□□ 1.92
PSMD4-203ENST00000427779 ANKLE2Q86XL3 938 aa27.02■■□□□ 1.92
PSMD4-203ENST00000427779 UGGT1Q9NYU2 1555 aa27.01■■□□□ 1.92
PSMD4-203ENST00000427779 SHANK2Q9UPX8 1470 aa27.01■■□□□ 1.91
PSMD4-203ENST00000427779 MIA2Q96PC5 1412 aa27.01■■□□□ 1.91
PSMD4-203ENST00000427779 THEMISQ8N1K5 641 aaPredicted RBP27.01■■□□□ 1.91
PSMD4-203ENST00000427779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.99■■□□□ 1.91
PSMD4-203ENST00000427779 ZC3H13Q5T200 1668 aaKnown RBP26.99■■□□□ 1.91
PSMD4-203ENST00000427779 DEPDC5O75140 1603 aa26.98■■□□□ 1.91
PSMD4-203ENST00000427779 RNF17Q9BXT8 1623 aaKnown RBP26.98■■□□□ 1.91
PSMD4-203ENST00000427779 TOM1O60784 492 aa26.98■■□□□ 1.91
PSMD4-203ENST00000427779 MAST1Q9Y2H9 1570 aa26.97■■□□□ 1.91
PSMD4-203ENST00000427779 SCAF1Q9H7N4 1312 aaKnown RBP26.96■■□□□ 1.91
PSMD4-203ENST00000427779 MED14O60244 1454 aa26.95■■□□□ 1.91
PSMD4-203ENST00000427779 EIF2AK4Q9P2K8 1649 aaKnown RBP26.95■■□□□ 1.91
PSMD4-203ENST00000427779 LRRC9Q6ZRR7 1453 aa26.94■■□□□ 1.9
PSMD4-203ENST00000427779 VWDEQ8N2E2 1590 aa26.94■■□□□ 1.9
PSMD4-203ENST00000427779 NPHP4O75161 1426 aaPredicted RBP26.94■■□□□ 1.9
PSMD4-203ENST00000427779 IQGAP1P46940 1657 aa26.92■■□□□ 1.9
PSMD4-203ENST00000427779 ABCC3O15438 1527 aa26.92■■□□□ 1.9
PSMD4-203ENST00000427779 PIP4K2BP78356 416 aa26.92■■□□□ 1.9
PSMD4-203ENST00000427779 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
PSMD4-203ENST00000427779 HSPA1LP34931 641 aa26.9■■□□□ 1.9
PSMD4-203ENST00000427779 MED1Q15648 1581 aaPredicted RBP26.86■■□□□ 1.89
PSMD4-203ENST00000427779 ERVK-7P63135 1459 aa26.86■■□□□ 1.89
PSMD4-203ENST00000427779 CEP152O94986 1710 aa26.85■■□□□ 1.89
PSMD4-203ENST00000427779 MROH1Q8NDA8 1641 aa26.84■■□□□ 1.89
PSMD4-203ENST00000427779 MAP3K1Q13233 1512 aa26.84■■□□□ 1.89
PSMD4-203ENST00000427779 MYOM3Q5VTT5 1437 aa26.82■■□□□ 1.88
PSMD4-203ENST00000427779 SYNMO15061 1565 aa26.82■■□□□ 1.88
PSMD4-203ENST00000427779 DUOX2Q9NRD8 1548 aa26.81■■□□□ 1.88
PSMD4-203ENST00000427779 CFAP65Q6ZU64 1925 aaKnown RBP26.81■■□□□ 1.88
PSMD4-203ENST00000427779 UBR1Q8IWV7 1749 aa26.8■■□□□ 1.88
PSMD4-203ENST00000427779 STRCP1A6NGW2 1772 aa26.79■■□□□ 1.88
PSMD4-203ENST00000427779 ALKQ9UM73 1620 aa26.78■■□□□ 1.88
PSMD4-203ENST00000427779 LRRC7Q96NW7 1537 aa26.76■■□□□ 1.87
PSMD4-203ENST00000427779 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
PSMD4-203ENST00000427779 PRDM15P57071 1507 aaPredicted RBP26.74■■□□□ 1.87
PSMD4-203ENST00000427779 SCAF11Q99590 1463 aaKnown RBP26.74■■□□□ 1.87
PSMD4-203ENST00000427779 CROCC2H7BZ55 1655 aa26.73■■□□□ 1.87
PSMD4-203ENST00000427779 ARHGAP31Q2M1Z3 1444 aa26.72■■□□□ 1.87
PSMD4-203ENST00000427779 ERBINQ96RT1 1412 aa26.71■■□□□ 1.87
PSMD4-203ENST00000427779 KIF15Q9NS87 1388 aa26.71■■□□□ 1.87
PSMD4-203ENST00000427779 SLIT1O75093 1534 aa26.7■■□□□ 1.87
PSMD4-203ENST00000427779 PHF23Q9BUL5 403 aaPredicted RBP26.69■■□□□ 1.86
PSMD4-203ENST00000427779 ARHGAP23Q9P227 1491 aa26.68■■□□□ 1.86
PSMD4-203ENST00000427779 LOC105371045A0A1W2PR82 267 aa26.67■■□□□ 1.86
PSMD4-203ENST00000427779 PTPN23Q9H3S7 1636 aa26.66■■□□□ 1.86
PSMD4-203ENST00000427779 TXNDC2Q86VQ3 553 aa26.65■■□□□ 1.86
PSMD4-203ENST00000427779 ABCC5O15440 1437 aa26.65■■□□□ 1.86
PSMD4-203ENST00000427779 EID1Q9Y6B2 187 aa26.64■■□□□ 1.86
PSMD4-203ENST00000427779 PIK3C2BO00750 1634 aa26.62■■□□□ 1.85
PSMD4-203ENST00000427779 KANK1Q14678 1352 aa26.62■■□□□ 1.85
PSMD4-203ENST00000427779 LTKP29376 864 aa26.62■■□□□ 1.85
PSMD4-203ENST00000427779 RRP7BPQ9NSQ0 103 aa26.62■■□□□ 1.85
PSMD4-203ENST00000427779 KDM5AP29375 1690 aaKnown RBP26.6■■□□□ 1.85
PSMD4-203ENST00000427779 APLP2Q06481 763 aa26.6■■□□□ 1.85
PSMD4-203ENST00000427779 DAPK1P53355 1430 aa26.59■■□□□ 1.85
PSMD4-203ENST00000427779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.59■■□□□ 1.852e-10■□□□□ 10.5
PSMD4-203ENST00000427779 SENP3Q9H4L4 574 aaPredicted RBP26.59■■□□□ 1.85
PSMD4-203ENST00000427779 XIRP1Q702N8 1843 aaKnown RBP26.59■■□□□ 1.85
PSMD4-203ENST00000427779 STAG3Q9UJ98 1225 aa26.58■■□□□ 1.85
PSMD4-203ENST00000427779 TMEM2Q9UHN6 1383 aa26.58■■□□□ 1.84
PSMD4-203ENST00000427779 EFCAB6Q5THR3 1501 aa26.55■■□□□ 1.84
PSMD4-203ENST00000427779 LMTK2Q8IWU2 1503 aa26.55■■□□□ 1.84
PSMD4-203ENST00000427779 ANKRD30AQ9BXX3 1397 aa26.54■■□□□ 1.84
PSMD4-203ENST00000427779 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
PSMD4-203ENST00000427779 IDI1Q13907 227 aa26.47■■□□□ 1.83
PSMD4-203ENST00000427779 CHIC2Q9UKJ5 165 aa26.46■■□□□ 1.83
PSMD4-203ENST00000427779 FAM135BQ49AJ0 1406 aa26.46■■□□□ 1.83
PSMD4-203ENST00000427779 ADGRB3O60242 1522 aa26.45■■□□□ 1.83
PSMD4-203ENST00000427779 TMEM94Q12767 1356 aa26.45■■□□□ 1.82
PSMD4-203ENST00000427779 KCNA6P17658 529 aa26.44■■□□□ 1.82
PSMD4-203ENST00000427779 NOS1P29475 1434 aa26.44■■□□□ 1.82
PSMD4-203ENST00000427779 TET3O43151 1660 aa26.44■■□□□ 1.82
PSMD4-203ENST00000427779 ADGRL2O95490 1459 aa26.41■■□□□ 1.82
PSMD4-203ENST00000427779 SLC52A1Q9NWF4 448 aa26.4■■□□□ 1.82
PSMD4-203ENST00000427779 NKTRP30414 1462 aaKnown RBP26.4■■□□□ 1.82
PSMD4-203ENST00000427779 ROBO1Q9Y6N7 1651 aa26.39■■□□□ 1.82
PSMD4-203ENST00000427779 NWD1Q149M9 1564 aa26.39■■□□□ 1.82
PSMD4-203ENST00000427779 PROSER2Q86WR7 435 aaPredicted RBP26.39■■□□□ 1.82
PSMD4-203ENST00000427779 SLC26A8Q96RN1 970 aa26.39■■□□□ 1.82
PSMD4-203ENST00000427779 RPRD2Q5VT52 1461 aaKnown RBP26.38■■□□□ 1.81
PSMD4-203ENST00000427779 RGS17Q9UGC6 210 aaPredicted RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms