RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 MYT1LQ9UL68 1186 aa30.64■■■□□ 2.5
CNEP1R1-202ENST00000427478 PLA2R1Q13018 1463 aa30.64■■■□□ 2.49
CNEP1R1-202ENST00000427478 KIDINS220Q9ULH0 1771 aa30.63■■■□□ 2.49
CNEP1R1-202ENST00000427478 ZNF518AQ6AHZ1 1483 aa30.61■■■□□ 2.49
CNEP1R1-202ENST00000427478 UHRF1BP1Q6BDS2 1440 aa30.61■■■□□ 2.49
CNEP1R1-202ENST00000427478 CYB5RLQ6IPT4 315 aa30.59■■■□□ 2.49
CNEP1R1-202ENST00000427478 EIF2AK4Q9P2K8 1649 aaKnown RBP30.59■■■□□ 2.49
CNEP1R1-202ENST00000427478 WASHC2AQ641Q2 1341 aa30.58■■■□□ 2.49
CNEP1R1-202ENST00000427478 E9PCH4 1651 aa30.58■■■□□ 2.49
CNEP1R1-202ENST00000427478 SPATA31E1Q6ZUB1 1445 aa30.57■■■□□ 2.48
CNEP1R1-202ENST00000427478 POLR1AO95602 1720 aaPredicted RBP30.55■■■□□ 2.48
CNEP1R1-202ENST00000427478 ATP10AO60312 1499 aa30.54■■■□□ 2.48
CNEP1R1-202ENST00000427478 RALGAPBQ86X10 1494 aa30.54■■■□□ 2.48
CNEP1R1-202ENST00000427478 POGZQ7Z3K3 1410 aa30.54■■■□□ 2.48
CNEP1R1-202ENST00000427478 KDM5CP41229 1560 aa30.54■■■□□ 2.48
CNEP1R1-202ENST00000427478 DCAF11Q8TEB1 546 aa30.53■■■□□ 2.48
CNEP1R1-202ENST00000427478 KDM2AQ9Y2K7 1162 aa30.53■■■□□ 2.48
CNEP1R1-202ENST00000427478 DHX29Q7Z478 1369 aaKnown RBP30.52■■■□□ 2.48
CNEP1R1-202ENST00000427478 TET3O43151 1660 aa30.51■■■□□ 2.47
CNEP1R1-202ENST00000427478 SCAF1Q9H7N4 1312 aaKnown RBP30.51■■■□□ 2.47
CNEP1R1-202ENST00000427478 MROH1Q8NDA8 1641 aa30.49■■■□□ 2.47
CNEP1R1-202ENST00000427478 MAP3K4Q9Y6R4 1608 aa30.49■■■□□ 2.47
CNEP1R1-202ENST00000427478 VWDEQ8N2E2 1590 aa30.49■■■□□ 2.47
CNEP1R1-202ENST00000427478 KIF3BO15066 747 aa30.49■■■□□ 2.47
CNEP1R1-202ENST00000427478 PRDM15P57071 1507 aaPredicted RBP30.48■■■□□ 2.47
CNEP1R1-202ENST00000427478 HECW2Q9P2P5 1572 aa30.48■■■□□ 2.47
CNEP1R1-202ENST00000427478 ANP32CO43423 234 aa30.48■■■□□ 2.47
CNEP1R1-202ENST00000427478 USP47Q96K76 1375 aa30.48■■■□□ 2.47
CNEP1R1-202ENST00000427478 SPHKAPQ2M3C7 1700 aa30.48■■■□□ 2.47
CNEP1R1-202ENST00000427478 NEO1Q92859 1461 aa30.48■■■□□ 2.47
CNEP1R1-202ENST00000427478 C11orf95C9JLR9 678 aaPredicted RBP30.47■■■□□ 2.47
CNEP1R1-202ENST00000427478 KANK1Q14678 1352 aa30.46■■■□□ 2.47
CNEP1R1-202ENST00000427478 CCDC7Q96M83 1385 aa30.46■■■□□ 2.47
CNEP1R1-202ENST00000427478 RGL3Q3MIN7 710 aa30.45■■■□□ 2.47
CNEP1R1-202ENST00000427478 A2MP01023 1474 aa30.45■■■□□ 2.47
CNEP1R1-202ENST00000427478 MLH3Q9UHC1 1453 aa30.43■■■□□ 2.46
CNEP1R1-202ENST00000427478 TRPM2O94759 1503 aa30.42■■■□□ 2.46
CNEP1R1-202ENST00000427478 TRPM1Q7Z4N2 1603 aa30.42■■■□□ 2.46
CNEP1R1-202ENST00000427478 BCORL1Q5H9F3 1711 aa30.41■■■□□ 2.46
CNEP1R1-202ENST00000427478 PRAG1Q86YV5 1406 aa30.4■■■□□ 2.46
CNEP1R1-202ENST00000427478 GLI2P10070 1586 aa30.4■■■□□ 2.46
CNEP1R1-202ENST00000427478 CNTLNQ9NXG0 1405 aa30.4■■■□□ 2.46
CNEP1R1-202ENST00000427478 ABCA6Q8N139 1617 aa30.39■■■□□ 2.46
CNEP1R1-202ENST00000427478 CEP152O94986 1710 aa30.39■■■□□ 2.46
CNEP1R1-202ENST00000427478 CARD11Q9BXL7 1154 aa30.38■■■□□ 2.45
CNEP1R1-202ENST00000427478 RNF17Q9BXT8 1623 aaKnown RBP30.38■■■□□ 2.45
CNEP1R1-202ENST00000427478 FRMPD1Q5SYB0 1578 aa30.38■■■□□ 2.45
CNEP1R1-202ENST00000427478 KIF7Q2M1P5 1343 aa30.37■■■□□ 2.45
CNEP1R1-202ENST00000427478 CLTCL1P53675 1640 aa30.36■■■□□ 2.45
CNEP1R1-202ENST00000427478 PTPRTO14522 1441 aa30.35■■■□□ 2.45
CNEP1R1-202ENST00000427478 RICTORQ6R327 1708 aa30.35■■■□□ 2.45
CNEP1R1-202ENST00000427478 ROCK2O75116 1388 aaKnown RBP30.34■■■□□ 2.45
CNEP1R1-202ENST00000427478 CCER2I3L3R5 266 aa30.33■■■□□ 2.45
CNEP1R1-202ENST00000427478 RAPGEF3O95398 923 aa30.33■■■□□ 2.45
CNEP1R1-202ENST00000427478 DIP2BQ9P265 1576 aa30.33■■■□□ 2.45
CNEP1R1-202ENST00000427478 EFCAB6Q5THR3 1501 aa30.32■■■□□ 2.44
CNEP1R1-202ENST00000427478 PPRC1Q5VV67 1664 aaKnown RBP30.31■■■□□ 2.44
CNEP1R1-202ENST00000427478 LMTK2Q8IWU2 1503 aa30.27■■■□□ 2.44
CNEP1R1-202ENST00000427478 DIP2CQ9Y2E4 1556 aa30.26■■■□□ 2.44
CNEP1R1-202ENST00000427478 GTF3C3Q9Y5Q9 886 aa30.26■■■□□ 2.43
CNEP1R1-202ENST00000427478 LAMC1P11047 1609 aa30.24■■■□□ 2.43
CNEP1R1-202ENST00000427478 TSPOAP1O95153 1857 aa30.24■■■□□ 2.43
CNEP1R1-202ENST00000427478 FAM69CQ0P6D2 419 aa30.24■■■□□ 2.43
CNEP1R1-202ENST00000427478 MADDQ8WXG6 1647 aa30.21■■■□□ 2.43
CNEP1R1-202ENST00000427478 UGGT1Q9NYU2 1555 aa30.21■■■□□ 2.43
CNEP1R1-202ENST00000427478 ST20-MTHFSA0A0A6YYL1 179 aa30.2■■■□□ 2.43
CNEP1R1-202ENST00000427478 NBPF1Q3BBV0 1214 aa30.2■■■□□ 2.43
CNEP1R1-202ENST00000427478 GPRASP1Q5JY77 1395 aa30.2■■■□□ 2.42
CNEP1R1-202ENST00000427478 POLR3GLQ9BT43 218 aa30.19■■■□□ 2.42
CNEP1R1-202ENST00000427478 GGT6Q6P531 493 aa30.19■■■□□ 2.42
CNEP1R1-202ENST00000427478 KIF1BO60333 1816 aa30.18■■■□□ 2.42
CNEP1R1-202ENST00000427478 ARID4BQ4LE39 1312 aaPredicted RBP30.17■■■□□ 2.42
CNEP1R1-202ENST00000427478 YEATS2Q9ULM3 1422 aa30.14■■■□□ 2.42
CNEP1R1-202ENST00000427478 NEURL4Q96JN8 1562 aa30.14■■■□□ 2.42
CNEP1R1-202ENST00000427478 ABCC3O15438 1527 aa30.14■■■□□ 2.42
CNEP1R1-202ENST00000427478 CFAP65Q6ZU64 1925 aaKnown RBP30.13■■■□□ 2.41
CNEP1R1-202ENST00000427478 MROH2AA6NES4 1674 aa30.12■■■□□ 2.41
CNEP1R1-202ENST00000427478 CAMSAP1Q5T5Y3 1602 aa30.12■■■□□ 2.41
CNEP1R1-202ENST00000427478 NPATQ14207 1427 aa30.11■■■□□ 2.41
CNEP1R1-202ENST00000427478 ZMYM4Q5VZL5 1548 aa30.1■■■□□ 2.41
CNEP1R1-202ENST00000427478 PRKRIP1Q9H875 184 aaPredicted RBP30.08■■■□□ 2.41
CNEP1R1-202ENST00000427478 WASHC2CQ9Y4E1 1318 aa30.07■■■□□ 2.4
CNEP1R1-202ENST00000427478 IFT172Q9UG01 1749 aa30.06■■■□□ 2.4
CNEP1R1-202ENST00000427478 KIF13AQ9H1H9 1805 aa30.05■■■□□ 2.4
CNEP1R1-202ENST00000427478 STAC3Q96MF2 364 aa30.04■■■□□ 2.4
CNEP1R1-202ENST00000427478 IQGAP1P46940 1657 aa30.03■■■□□ 2.4
CNEP1R1-202ENST00000427478 ZC3H13Q5T200 1668 aaKnown RBP30.03■■■□□ 2.4
CNEP1R1-202ENST00000427478 SIGLEC1Q9BZZ2 1709 aa30.02■■■□□ 2.4
CNEP1R1-202ENST00000427478 ADGRB3O60242 1522 aa30.01■■■□□ 2.39
CNEP1R1-202ENST00000427478 KIAA1210Q9ULL0 1709 aa30■■■□□ 2.39
CNEP1R1-202ENST00000427478 MYOM2P54296 1465 aa29.99■■■□□ 2.39
CNEP1R1-202ENST00000427478 COL17A1Q9UMD9 1497 aaPredicted RBP29.98■■■□□ 2.39
CNEP1R1-202ENST00000427478 CCDC184Q52MB2 194 aa29.95■■■□□ 2.39
CNEP1R1-202ENST00000427478 TESK2Q96S53 571 aa29.95■■■□□ 2.38
CNEP1R1-202ENST00000427478 CHGAP10645 457 aaKnown RBP29.93■■■□□ 2.38
CNEP1R1-202ENST00000427478 DISP3Q9P2K9 1392 aa29.93■■■□□ 2.38
CNEP1R1-202ENST00000427478 SYNMO15061 1565 aa29.92■■■□□ 2.38
CNEP1R1-202ENST00000427478 NOS1P29475 1434 aa29.92■■■□□ 2.38
CNEP1R1-202ENST00000427478 PPLO60437 1756 aa29.91■■■□□ 2.38
CNEP1R1-202ENST00000427478 SCAF11Q99590 1463 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms