RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 MYOM3Q5VTT5 1437 aa31.59■■■□□ 2.65
CCDC107-206ENST00000426546 MIA2Q96PC5 1412 aa31.59■■■□□ 2.65
CCDC107-206ENST00000426546 ILDR2Q71H61 639 aa31.59■■■□□ 2.65
CCDC107-206ENST00000426546 FAM135AQ9P2D6 1515 aa31.57■■■□□ 2.64
CCDC107-206ENST00000426546 MAST1Q9Y2H9 1570 aa31.56■■■□□ 2.64
CCDC107-206ENST00000426546 TCOF1Q13428 1488 aaKnown RBP31.56■■■□□ 2.64
CCDC107-206ENST00000426546 ZNF335Q9H4Z2 1342 aaPredicted RBP31.55■■■□□ 2.64
CCDC107-206ENST00000426546 TSPY4P0CV99 314 aa31.55■■■□□ 2.64
CCDC107-206ENST00000426546 TSPY10P0CW01 314 aa31.55■■■□□ 2.64
CCDC107-206ENST00000426546 PKD2Q13563 968 aa31.55■■■□□ 2.64
CCDC107-206ENST00000426546 KIF3BO15066 747 aa31.51■■■□□ 2.63
CCDC107-206ENST00000426546 SPATA31D1Q6ZQQ2 1576 aa31.51■■■□□ 2.63
CCDC107-206ENST00000426546 KDM5DQ9BY66 1539 aa31.5■■■□□ 2.63
CCDC107-206ENST00000426546 APLP2Q06481 763 aa31.49■■■□□ 2.63
CCDC107-206ENST00000426546 A2ML1A8K2U0 1454 aa31.47■■■□□ 2.63
CCDC107-206ENST00000426546 DNMT1P26358 1616 aaKnown RBP31.45■■■□□ 2.62
CCDC107-206ENST00000426546 RNF17Q9BXT8 1623 aaKnown RBP31.43■■■□□ 2.62
CCDC107-206ENST00000426546 EIF2AK4Q9P2K8 1649 aaKnown RBP31.43■■■□□ 2.62
CCDC107-206ENST00000426546 SOCS7O14512 581 aa31.42■■■□□ 2.62
CCDC107-206ENST00000426546 PZPP20742 1482 aa31.41■■■□□ 2.62
CCDC107-206ENST00000426546 CROCC2H7BZ55 1655 aa31.41■■■□□ 2.62
CCDC107-206ENST00000426546 PTPN23Q9H3S7 1636 aa31.4■■■□□ 2.62
CCDC107-206ENST00000426546 UBAP1LF5GYI3 381 aa31.4■■■□□ 2.62
CCDC107-206ENST00000426546 FBXO31Q5XUX0 539 aaPredicted RBP31.39■■■□□ 2.62
CCDC107-206ENST00000426546 WASHC2CQ9Y4E1 1318 aa31.38■■■□□ 2.61
CCDC107-206ENST00000426546 TNRQ92752 1358 aa31.38■■■□□ 2.61
CCDC107-206ENST00000426546 SHANK2Q9UPX8 1470 aa31.37■■■□□ 2.61
CCDC107-206ENST00000426546 ZC3H13Q5T200 1668 aaKnown RBP31.37■■■□□ 2.61
CCDC107-206ENST00000426546 DUOX2Q9NRD8 1548 aa31.34■■■□□ 2.61
CCDC107-206ENST00000426546 FGD6Q6ZV73 1430 aa31.33■■■□□ 2.61
CCDC107-206ENST00000426546 POLR1AO95602 1720 aaPredicted RBP31.33■■■□□ 2.61
CCDC107-206ENST00000426546 NEURL4Q96JN8 1562 aa31.33■■■□□ 2.61
CCDC107-206ENST00000426546 ABCC5O15440 1437 aa31.31■■■□□ 2.6
CCDC107-206ENST00000426546 MROH1Q8NDA8 1641 aa31.3■■■□□ 2.6
CCDC107-206ENST00000426546 ABCC3O15438 1527 aa31.29■■■□□ 2.6
CCDC107-206ENST00000426546 DAPK1P53355 1430 aa31.27■■■□□ 2.6
CCDC107-206ENST00000426546 KIF15Q9NS87 1388 aa31.25■■■□□ 2.59
CCDC107-206ENST00000426546 NLRP1Q9C000 1473 aa31.24■■■□□ 2.59
CCDC107-206ENST00000426546 CPS1P31327 1500 aa31.24■■■□□ 2.59
CCDC107-206ENST00000426546 ERBINQ96RT1 1412 aa31.24■■■□□ 2.59
CCDC107-206ENST00000426546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.23■■■□□ 2.59
CCDC107-206ENST00000426546 CEP152O94986 1710 aa31.22■■■□□ 2.59
CCDC107-206ENST00000426546 PRDM15P57071 1507 aaPredicted RBP31.21■■■□□ 2.59
CCDC107-206ENST00000426546 ANKLE2Q86XL3 938 aa31.2■■■□□ 2.59
CCDC107-206ENST00000426546 UGGT1Q9NYU2 1555 aa31.19■■■□□ 2.58
CCDC107-206ENST00000426546 THEMISQ8N1K5 641 aaPredicted RBP31.19■■■□□ 2.58
CCDC107-206ENST00000426546 VWDEQ8N2E2 1590 aa31.17■■■□□ 2.58
CCDC107-206ENST00000426546 DEPDC5O75140 1603 aa31.16■■■□□ 2.58
CCDC107-206ENST00000426546 RRP7BPQ9NSQ0 103 aa31.16■■■□□ 2.58
CCDC107-206ENST00000426546 MED14O60244 1454 aa31.15■■■□□ 2.58
CCDC107-206ENST00000426546 ERVK-7P63135 1459 aa31.14■■■□□ 2.58
CCDC107-206ENST00000426546 NPHP4O75161 1426 aaPredicted RBP31.14■■■□□ 2.58
CCDC107-206ENST00000426546 ANKRD30AQ9BXX3 1397 aa31.13■■■□□ 2.57
CCDC107-206ENST00000426546 PIP4K2BP78356 416 aa31.12■■■□□ 2.57
CCDC107-206ENST00000426546 TOM1O60784 492 aa31.11■■■□□ 2.57
CCDC107-206ENST00000426546 HSPA1LP34931 641 aa31.11■■■□□ 2.57
CCDC107-206ENST00000426546 SCAF1Q9H7N4 1312 aaKnown RBP31.11■■■□□ 2.57
CCDC107-206ENST00000426546 ARHGAP31Q2M1Z3 1444 aa31.09■■■□□ 2.57
CCDC107-206ENST00000426546 ADGRL2O95490 1459 aa31.08■■■□□ 2.57
CCDC107-206ENST00000426546 CFAP65Q6ZU64 1925 aaKnown RBP31.08■■■□□ 2.57
CCDC107-206ENST00000426546 IQGAP1P46940 1657 aa31.07■■■□□ 2.56
CCDC107-206ENST00000426546 CHIC2Q9UKJ5 165 aa31.06■■■□□ 2.56
CCDC107-206ENST00000426546 ALKQ9UM73 1620 aa31.03■■■□□ 2.56
CCDC107-206ENST00000426546 KANK1Q14678 1352 aa31.03■■■□□ 2.56
CCDC107-206ENST00000426546 MED1Q15648 1581 aaPredicted RBP31.01■■■□□ 2.56
CCDC107-206ENST00000426546 FAM50AQ14320 339 aaKnown RBP31.01■■■□□ 2.55
CCDC107-206ENST00000426546 UBR1Q8IWV7 1749 aa31.01■■■□□ 2.55
CCDC107-206ENST00000426546 LMTK2Q8IWU2 1503 aa31■■■□□ 2.55
CCDC107-206ENST00000426546 STRCP1A6NGW2 1772 aa31■■■□□ 2.55
CCDC107-206ENST00000426546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.98■■■□□ 2.55
CCDC107-206ENST00000426546 LRRC7Q96NW7 1537 aa30.95■■■□□ 2.55
CCDC107-206ENST00000426546 EFCAB6Q5THR3 1501 aa30.91■■■□□ 2.54
CCDC107-206ENST00000426546 SYNMO15061 1565 aa30.91■■■□□ 2.54
CCDC107-206ENST00000426546 ANKRD50Q9ULJ7 1429 aa30.9■■■□□ 2.54
CCDC107-206ENST00000426546 SCAF11Q99590 1463 aaKnown RBP30.89■■■□□ 2.54
CCDC107-206ENST00000426546 SLIT1O75093 1534 aa30.88■■■□□ 2.53
CCDC107-206ENST00000426546 PIK3C2BO00750 1634 aa30.88■■■□□ 2.53
CCDC107-206ENST00000426546 KDM5AP29375 1690 aaKnown RBP30.88■■■□□ 2.53
CCDC107-206ENST00000426546 ARHGAP23Q9P227 1491 aa30.88■■■□□ 2.53
CCDC107-206ENST00000426546 LTKP29376 864 aa30.86■■■□□ 2.53
CCDC107-206ENST00000426546 TXNDC2Q86VQ3 553 aa30.82■■■□□ 2.52
CCDC107-206ENST00000426546 NOS1P29475 1434 aa30.81■■■□□ 2.52
CCDC107-206ENST00000426546 ROCK1Q13464 1354 aa30.81■■■□□ 2.52
CCDC107-206ENST00000426546 UNC13BO14795 1591 aa30.8■■■□□ 2.52
CCDC107-206ENST00000426546 RPRD2Q5VT52 1461 aaKnown RBP30.8■■■□□ 2.52
CCDC107-206ENST00000426546 TET3O43151 1660 aa30.8■■■□□ 2.52
CCDC107-206ENST00000426546 SENP3Q9H4L4 574 aaPredicted RBP30.76■■■□□ 2.51
CCDC107-206ENST00000426546 GCC2Q8IWJ2 1684 aa30.76■■■□□ 2.51
CCDC107-206ENST00000426546 TMEM2Q9UHN6 1383 aa30.76■■■□□ 2.51
CCDC107-206ENST00000426546 IDI1Q13907 227 aa30.74■■■□□ 2.51
CCDC107-206ENST00000426546 PHF23Q9BUL5 403 aaPredicted RBP30.74■■■□□ 2.51
CCDC107-206ENST00000426546 STAG3Q9UJ98 1225 aa30.74■■■□□ 2.51
CCDC107-206ENST00000426546 EID1Q9Y6B2 187 aa30.74■■■□□ 2.51
CCDC107-206ENST00000426546 XIRP1Q702N8 1843 aaKnown RBP30.74■■■□□ 2.51
CCDC107-206ENST00000426546 ADGRB3O60242 1522 aa30.73■■■□□ 2.51
CCDC107-206ENST00000426546 SLC52A1Q9NWF4 448 aa30.7■■■□□ 2.51
CCDC107-206ENST00000426546 IQGAP3Q86VI3 1631 aa30.68■■■□□ 2.5
CCDC107-206ENST00000426546 PPARGC1BQ86YN6 1023 aaKnown RBP30.67■■■□□ 2.5
CCDC107-206ENST00000426546 E9PCH4 1651 aa30.64■■■□□ 2.5
CCDC107-206ENST00000426546 ITGAEP38570 1179 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms