RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 EHBP1L1Q8N3D4 1523 aa8.94□□□□□ -0.98
HERPUD2-204ENST00000426180 ABCA9Q8IUA7 1624 aa8.94□□□□□ -0.98
HERPUD2-204ENST00000426180 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
HERPUD2-204ENST00000426180 FAM163AQ96GL9 167 aaPredicted RBP8.93□□□□□ -0.98
HERPUD2-204ENST00000426180 TRIM35Q9UPQ4 493 aa8.93□□□□□ -0.98
HERPUD2-204ENST00000426180 COLQQ9Y215 455 aaPredicted RBP8.93□□□□□ -0.98
HERPUD2-204ENST00000426180 PPRC1Q5VV67 1664 aaKnown RBP8.92□□□□□ -0.98
HERPUD2-204ENST00000426180 NCOA2Q15596 1464 aa8.92□□□□□ -0.98
HERPUD2-204ENST00000426180 IFNL1Q8IU54 200 aa8.92□□□□□ -0.98
HERPUD2-204ENST00000426180 IER5LQ5T953 404 aa8.91□□□□□ -0.98
HERPUD2-204ENST00000426180 FBXO3Q9UK99 471 aa8.91□□□□□ -0.98
HERPUD2-204ENST00000426180 PLCH2O75038 1416 aa8.9□□□□□ -0.98
HERPUD2-204ENST00000426180 DCAF8Q5TAQ9 597 aa8.9□□□□□ -0.98
HERPUD2-204ENST00000426180 GPATCH8Q9UKJ3 1502 aaKnown RBP8.9□□□□□ -0.99
HERPUD2-204ENST00000426180 TSPOAP1O95153 1857 aa8.89□□□□□ -0.99
HERPUD2-204ENST00000426180 PHLDB1Q86UU1 1377 aa8.89□□□□□ -0.99
HERPUD2-204ENST00000426180 CCNB3Q8WWL7 1395 aa8.89□□□□□ -0.99
HERPUD2-204ENST00000426180 PCDH10Q9P2E7 1040 aa8.89□□□□□ -0.99
HERPUD2-204ENST00000426180 SUPT6HQ7KZ85 1726 aaKnown RBP8.88□□□□□ -0.99
HERPUD2-204ENST00000426180 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
HERPUD2-204ENST00000426180 COL17A1Q9UMD9 1497 aaPredicted RBP8.88□□□□□ -0.99
HERPUD2-204ENST00000426180 ZNF644Q9H582 1327 aaPredicted RBP8.87□□□□□ -0.99
HERPUD2-204ENST00000426180 FANCAO15360 1455 aa8.87□□□□□ -0.99
HERPUD2-204ENST00000426180 ARHGAP5Q13017 1502 aa8.86□□□□□ -0.99
HERPUD2-204ENST00000426180 CDC42BPAQ5VT25 1732 aa8.86□□□□□ -0.99
HERPUD2-204ENST00000426180 TEX14Q8IWB6 1497 aa8.86□□□□□ -0.99
HERPUD2-204ENST00000426180 EFCAB2Q5VUJ9 269 aa8.86□□□□□ -0.99
HERPUD2-204ENST00000426180 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
HERPUD2-204ENST00000426180 ZNF777Q9ULD5 760 aaPredicted RBP8.86□□□□□ -0.99
HERPUD2-204ENST00000426180 PREX2Q70Z35 1606 aa8.86□□□□□ -0.99
HERPUD2-204ENST00000426180 AKNAQ7Z591 1439 aa8.86□□□□□ -0.99
HERPUD2-204ENST00000426180 MYO5CQ9NQX4 1742 aa8.85□□□□□ -0.99
HERPUD2-204ENST00000426180 CDC42BPBQ9Y5S2 1711 aa8.85□□□□□ -0.99
HERPUD2-204ENST00000426180 ARAP3Q8WWN8 1544 aa8.85□□□□□ -0.99
HERPUD2-204ENST00000426180 NEO1Q92859 1461 aa8.85□□□□□ -0.99
HERPUD2-204ENST00000426180 MYOM3Q5VTT5 1437 aa8.85□□□□□ -0.99
HERPUD2-204ENST00000426180 ARHGEF12Q9NZN5 1544 aa8.85□□□□□ -0.99
HERPUD2-204ENST00000426180 RAPGEF3O95398 923 aa8.84□□□□□ -0.99
HERPUD2-204ENST00000426180 PYGBP11216 843 aa8.84□□□□□ -0.99
HERPUD2-204ENST00000426180 LCE2DQ5TA82 110 aaPredicted RBP8.84□□□□□ -0.99
HERPUD2-204ENST00000426180 SAMD9LQ8IVG5 1584 aa8.84□□□□□ -0.99
HERPUD2-204ENST00000426180 SCAPERQ9BY12 1400 aa8.83□□□□□ -1
HERPUD2-204ENST00000426180 HNRNPMP52272 730 aaKnown RBP eCLIP8.83□□□□□ -12e-6■■■■■ 28.7
HERPUD2-204ENST00000426180 ADGRL1O94910 1474 aa8.83□□□□□ -1
HERPUD2-204ENST00000426180 FGD6Q6ZV73 1430 aa8.82□□□□□ -1
HERPUD2-204ENST00000426180 PLCG2P16885 1265 aa8.82□□□□□ -1
HERPUD2-204ENST00000426180 CAMSAP2Q08AD1 1489 aa8.82□□□□□ -1
HERPUD2-204ENST00000426180 TRAPPC8Q9Y2L5 1435 aa8.81□□□□□ -1
HERPUD2-204ENST00000426180 ABCC1P33527 1531 aa8.81□□□□□ -1
HERPUD2-204ENST00000426180 KLHL34Q8N239 644 aa8.81□□□□□ -1
HERPUD2-204ENST00000426180 AFAP1Q8N556 730 aa8.81□□□□□ -1
HERPUD2-204ENST00000426180 MBD5Q9P267 1494 aa8.81□□□□□ -1
HERPUD2-204ENST00000426180 FRMPD1Q5SYB0 1578 aa8.81□□□□□ -1
HERPUD2-204ENST00000426180 CFAP74Q9C0B2 1584 aa8.81□□□□□ -1
HERPUD2-204ENST00000426180 ITSN2Q9NZM3 1697 aa8.81□□□□□ -1
HERPUD2-204ENST00000426180 POGZQ7Z3K3 1410 aa8.8□□□□□ -1
HERPUD2-204ENST00000426180 MIA2Q96PC5 1412 aa8.8□□□□□ -1
HERPUD2-204ENST00000426180 SYCP2Q9BX26 1530 aa8.8□□□□□ -1
HERPUD2-204ENST00000426180 KDM6BO15054 1643 aa8.8□□□□□ -1
HERPUD2-204ENST00000426180 DENND4BO75064 1496 aaPredicted RBP8.8□□□□□ -1
HERPUD2-204ENST00000426180 KIAA1107Q9UPP5 1409 aa8.8□□□□□ -1
HERPUD2-204ENST00000426180 TCOF1Q13428 1488 aaKnown RBP8.79□□□□□ -1
HERPUD2-204ENST00000426180 SLAIN1Q8ND83 568 aa8.79□□□□□ -1
HERPUD2-204ENST00000426180 PTPN23Q9H3S7 1636 aa8.79□□□□□ -1
HERPUD2-204ENST00000426180 IRX5P78411 483 aaPredicted RBP8.78□□□□□ -1
HERPUD2-204ENST00000426180 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
HERPUD2-204ENST00000426180 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
HERPUD2-204ENST00000426180 PLEKHH2Q8IVE3 1493 aa8.77□□□□□ -1
HERPUD2-204ENST00000426180 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
HERPUD2-204ENST00000426180 RICTORQ6R327 1708 aa8.77□□□□□ -1.01
HERPUD2-204ENST00000426180 GSE1Q14687 1217 aa8.76□□□□□ -1.01
HERPUD2-204ENST00000426180 ABCC5O15440 1437 aa8.76□□□□□ -1.01
HERPUD2-204ENST00000426180 RRBP1Q9P2E9 1410 aaKnown RBP8.76□□□□□ -1.01
HERPUD2-204ENST00000426180 YEATS2Q9ULM3 1422 aa8.76□□□□□ -1.01
HERPUD2-204ENST00000426180 ZNF518AQ6AHZ1 1483 aa8.76□□□□□ -1.01
HERPUD2-204ENST00000426180 KDM5CP41229 1560 aa8.75□□□□□ -1.01
HERPUD2-204ENST00000426180 PTPRKQ15262 1439 aa8.75□□□□□ -1.01
HERPUD2-204ENST00000426180 VASPP50552 380 aaPredicted RBP8.75□□□□□ -1.01
HERPUD2-204ENST00000426180 CCDC141Q6ZP82 1450 aa8.75□□□□□ -1.01
HERPUD2-204ENST00000426180 SPAG9O60271 1321 aaKnown RBP8.75□□□□□ -1.01
HERPUD2-204ENST00000426180 ARHGEF5Q12774 1597 aa8.74□□□□□ -1.01
HERPUD2-204ENST00000426180 DAPK1P53355 1430 aa8.74□□□□□ -1.01
HERPUD2-204ENST00000426180 ITGAEP38570 1179 aa8.74□□□□□ -1.01
HERPUD2-204ENST00000426180 ZMYM4Q5VZL5 1548 aa8.74□□□□□ -1.01
HERPUD2-204ENST00000426180 MLH3Q9UHC1 1453 aa8.73□□□□□ -1.01
HERPUD2-204ENST00000426180 CHIC2Q9UKJ5 165 aa8.73□□□□□ -1.01
HERPUD2-204ENST00000426180 MYT1LQ9UL68 1186 aa8.73□□□□□ -1.01
HERPUD2-204ENST00000426180 DNMT1P26358 1616 aaKnown RBP8.72□□□□□ -1.01
HERPUD2-204ENST00000426180 ZFYVE16Q7Z3T8 1539 aa8.72□□□□□ -1.01
HERPUD2-204ENST00000426180 RSPH4AQ5TD94 716 aa8.72□□□□□ -1.01
HERPUD2-204ENST00000426180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.72□□□□□ -1.01
HERPUD2-204ENST00000426180 C9orf84Q5VXU9 1444 aa8.71□□□□□ -1.01
HERPUD2-204ENST00000426180 ATP7AQ04656 1500 aa8.71□□□□□ -1.01
HERPUD2-204ENST00000426180 HECW2Q9P2P5 1572 aa8.71□□□□□ -1.02
HERPUD2-204ENST00000426180 INO80Q9ULG1 1556 aaPredicted RBP8.71□□□□□ -1.02
HERPUD2-204ENST00000426180 TSPY4P0CV99 314 aa8.71□□□□□ -1.02
HERPUD2-204ENST00000426180 TSPY10P0CW01 314 aa8.71□□□□□ -1.02
HERPUD2-204ENST00000426180 ZNF467Q7Z7K2 595 aaPredicted RBP8.71□□□□□ -1.02
HERPUD2-204ENST00000426180 ABCA6Q8N139 1617 aa8.71□□□□□ -1.02
HERPUD2-204ENST00000426180 KIDINS220Q9ULH0 1771 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms