RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 RBM33Q96EV2 1170 aaKnown RBP11.67□□□□□ -0.54
SSBP3-207ENST00000426150 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.67□□□□□ -0.54
SSBP3-207ENST00000426150 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
SSBP3-207ENST00000426150 MS4A1P11836 297 aa11.65□□□□□ -0.54
SSBP3-207ENST00000426150 TSR1Q2NL82 804 aaKnown RBP11.65□□□□□ -0.54
SSBP3-207ENST00000426150 TYW1BQ6NUM6 668 aa11.65□□□□□ -0.54
SSBP3-207ENST00000426150 HOMEZQ8IX15 550 aa11.65□□□□□ -0.54
SSBP3-207ENST00000426150 REPIN1Q9BWE0 567 aaKnown RBP11.65□□□□□ -0.54
SSBP3-207ENST00000426150 ZMYND15Q9H091 742 aa11.65□□□□□ -0.54
SSBP3-207ENST00000426150 GOPCQ9HD26 462 aa11.65□□□□□ -0.54
SSBP3-207ENST00000426150 ABCC9O60706 1549 aa11.64□□□□□ -0.55
SSBP3-207ENST00000426150 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
SSBP3-207ENST00000426150 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
SSBP3-207ENST00000426150 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
SSBP3-207ENST00000426150 TMUB1Q9BVT8 246 aa11.62□□□□□ -0.55
SSBP3-207ENST00000426150 CLCN1P35523 988 aa11.61□□□□□ -0.55
SSBP3-207ENST00000426150 PHOX2BQ99453 314 aa11.6□□□□□ -0.55
SSBP3-207ENST00000426150 MDM2Q00987 491 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-207ENST00000426150 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
SSBP3-207ENST00000426150 FOSBP53539 338 aa11.58□□□□□ -0.56
SSBP3-207ENST00000426150 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
SSBP3-207ENST00000426150 PCMTD1Q96MG8 357 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-207ENST00000426150 FLIIQ13045 1269 aa11.55□□□□□ -0.56
SSBP3-207ENST00000426150 CERKQ8TCT0 537 aa11.55□□□□□ -0.56
SSBP3-207ENST00000426150 SSTR3P32745 418 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-207ENST00000426150 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
SSBP3-207ENST00000426150 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
SSBP3-207ENST00000426150 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
SSBP3-207ENST00000426150 METTL3Q86U44 580 aaKnown RBP11.54□□□□□ -0.56
SSBP3-207ENST00000426150 OATP04181 439 aa11.53□□□□□ -0.56
SSBP3-207ENST00000426150 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
SSBP3-207ENST00000426150 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
SSBP3-207ENST00000426150 ZDHHC16Q969W1 377 aa11.52□□□□□ -0.57
SSBP3-207ENST00000426150 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-207ENST00000426150 ADGRG1Q9Y653 693 aa11.51□□□□□ -0.57
SSBP3-207ENST00000426150 FAM217BQ9NTX9 383 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-207ENST00000426150 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
SSBP3-207ENST00000426150 NUDT7P0C024 238 aa11.49□□□□□ -0.57
SSBP3-207ENST00000426150 HOXB3P14651 431 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-207ENST00000426150 TTC13Q8NBP0 860 aa11.49□□□□□ -0.57
SSBP3-207ENST00000426150 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
SSBP3-207ENST00000426150 NLRP7Q8WX94 980 aa11.49□□□□□ -0.57
SSBP3-207ENST00000426150 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
SSBP3-207ENST00000426150 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
SSBP3-207ENST00000426150 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.571e-6■■□□□ 12.4
SSBP3-207ENST00000426150 ADAM33Q9BZ11 813 aa11.48□□□□□ -0.57
SSBP3-207ENST00000426150 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
SSBP3-207ENST00000426150 ARSIQ5FYB1 569 aa11.47□□□□□ -0.57
SSBP3-207ENST00000426150 PRSS12P56730 875 aa11.45□□□□□ -0.58
SSBP3-207ENST00000426150 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
SSBP3-207ENST00000426150 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
SSBP3-207ENST00000426150 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
SSBP3-207ENST00000426150 MAMSTRQ6ZN01 415 aa11.42□□□□□ -0.58
SSBP3-207ENST00000426150 OTUD5Q96G74 571 aa11.42□□□□□ -0.58
SSBP3-207ENST00000426150 CDCA7LQ96GN5 454 aa11.42□□□□□ -0.58
SSBP3-207ENST00000426150 SCUBE2Q9NQ36 999 aa11.42□□□□□ -0.58
SSBP3-207ENST00000426150 PROCA1Q8NCQ7 364 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-207ENST00000426150 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
SSBP3-207ENST00000426150 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
SSBP3-207ENST00000426150 MCM6Q14566 821 aa11.4□□□□□ -0.58
SSBP3-207ENST00000426150 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
SSBP3-207ENST00000426150 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
SSBP3-207ENST00000426150 A6NJR5 290 aa11.38□□□□□ -0.59
SSBP3-207ENST00000426150 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-207ENST00000426150 UBTFP17480 764 aaKnown RBP11.37□□□□□ -0.59
SSBP3-207ENST00000426150 CLUAP1Q96AJ1 413 aa11.37□□□□□ -0.59
SSBP3-207ENST00000426150 FAM198AQ9UFP1 575 aa11.37□□□□□ -0.59
SSBP3-207ENST00000426150 LHX6Q9UPM6 363 aa11.37□□□□□ -0.59
SSBP3-207ENST00000426150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.36□□□□□ -0.59
SSBP3-207ENST00000426150 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
SSBP3-207ENST00000426150 COL9A1P20849 921 aa11.36□□□□□ -0.59
SSBP3-207ENST00000426150 PPP4R3BQ5MIZ7 849 aa11.36□□□□□ -0.59
SSBP3-207ENST00000426150 ZNF710Q8N1W2 664 aa11.36□□□□□ -0.59
SSBP3-207ENST00000426150 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
SSBP3-207ENST00000426150 APBB1O00213 710 aa11.35□□□□□ -0.59
SSBP3-207ENST00000426150 CLK2P49760 499 aaKnown RBP11.35□□□□□ -0.59
SSBP3-207ENST00000426150 TBC1D2Q9BYX2 928 aa11.35□□□□□ -0.59
SSBP3-207ENST00000426150 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
SSBP3-207ENST00000426150 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-207ENST00000426150 RCCD1A6NED2 376 aa11.34□□□□□ -0.59
SSBP3-207ENST00000426150 EYA1Q99502 592 aa11.34□□□□□ -0.59
SSBP3-207ENST00000426150 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
SSBP3-207ENST00000426150 ARID3AQ99856 593 aa11.33□□□□□ -0.6
SSBP3-207ENST00000426150 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
SSBP3-207ENST00000426150 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
SSBP3-207ENST00000426150 TRAK2O60296 914 aa11.31□□□□□ -0.6
SSBP3-207ENST00000426150 LHX8Q68G74 356 aa11.31□□□□□ -0.6
SSBP3-207ENST00000426150 PTPREP23469 700 aa11.3□□□□□ -0.6
SSBP3-207ENST00000426150 C3orf80F5H4A9 247 aa11.28□□□□□ -0.6
SSBP3-207ENST00000426150 CD46P15529 392 aa11.28□□□□□ -0.6
SSBP3-207ENST00000426150 NUDT18Q6ZVK8 323 aa11.28□□□□□ -0.6
SSBP3-207ENST00000426150 SPIRE2Q8WWL2 714 aa11.28□□□□□ -0.6
SSBP3-207ENST00000426150 LIMD1Q9UGP4 676 aa11.28□□□□□ -0.6
SSBP3-207ENST00000426150 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
SSBP3-207ENST00000426150 RFC5P40937 340 aa11.27□□□□□ -0.61
SSBP3-207ENST00000426150 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
SSBP3-207ENST00000426150 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
SSBP3-207ENST00000426150 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
SSBP3-207ENST00000426150 DNAJB2P25686 324 aa11.26□□□□□ -0.61
SSBP3-207ENST00000426150 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms