RNA–Protein interactions for RNA: ENST00000425731.7

ZIC4-202, Transcript of Zic family member 4, humanhuman

TSL 2 BASIC

Gene ZIC4, Length 3,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-202ENST00000425731 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
ZIC4-202ENST00000425731 MRE11P49959 708 aa13.69□□□□□ -0.22
ZIC4-202ENST00000425731 PANK2Q9BZ23 570 aa13.69□□□□□ -0.22
ZIC4-202ENST00000425731 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
ZIC4-202ENST00000425731 RRAGDQ9NQL2 400 aaPredicted RBP13.68□□□□□ -0.22
ZIC4-202ENST00000425731 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
ZIC4-202ENST00000425731 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
ZIC4-202ENST00000425731 UACAQ9BZF9 1416 aa13.67□□□□□ -0.22
ZIC4-202ENST00000425731 PANK3Q9H999 370 aa13.67□□□□□ -0.22
ZIC4-202ENST00000425731 DDX11L8A8MPP1 907 aa13.67□□□□□ -0.22
ZIC4-202ENST00000425731 TMF1P82094 1093 aa13.67□□□□□ -0.22
ZIC4-202ENST00000425731 CHMP5Q9NZZ3 219 aa13.67□□□□□ -0.22
ZIC4-202ENST00000425731 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
ZIC4-202ENST00000425731 KIAA1211Q6ZU35 1233 aa13.66□□□□□ -0.22
ZIC4-202ENST00000425731 RWDD1Q9H446 243 aaPredicted RBP13.66□□□□□ -0.22
ZIC4-202ENST00000425731 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
ZIC4-202ENST00000425731 PANK1Q8TE04 598 aa13.66□□□□□ -0.22
ZIC4-202ENST00000425731 APAF1O14727 1248 aa13.65□□□□□ -0.22
ZIC4-202ENST00000425731 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.22
ZIC4-202ENST00000425731 ROCK2O75116 1388 aaKnown RBP13.65□□□□□ -0.22
ZIC4-202ENST00000425731 CFTRP13569 1480 aa13.64□□□□□ -0.23
ZIC4-202ENST00000425731 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
ZIC4-202ENST00000425731 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
ZIC4-202ENST00000425731 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
ZIC4-202ENST00000425731 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
ZIC4-202ENST00000425731 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
ZIC4-202ENST00000425731 LRRC9Q6ZRR7 1453 aa13.63□□□□□ -0.23
ZIC4-202ENST00000425731 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
ZIC4-202ENST00000425731 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
ZIC4-202ENST00000425731 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
ZIC4-202ENST00000425731 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
ZIC4-202ENST00000425731 APBB1O00213 710 aa13.62□□□□□ -0.23
ZIC4-202ENST00000425731 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
ZIC4-202ENST00000425731 CUX1P39880 1505 aa13.62□□□□□ -0.23
ZIC4-202ENST00000425731 MCM4P33991 863 aa13.62□□□□□ -0.23
ZIC4-202ENST00000425731 FOXD4L6Q3SYB3 417 aaPredicted RBP13.62□□□□□ -0.23
ZIC4-202ENST00000425731 GGT6Q6P531 493 aa13.62□□□□□ -0.23
ZIC4-202ENST00000425731 FOXD4L3Q6VB84 417 aaPredicted RBP13.62□□□□□ -0.23
ZIC4-202ENST00000425731 BCAR3O75815 825 aa13.61□□□□□ -0.23
ZIC4-202ENST00000425731 XRCC6P12956 609 aaKnown RBP eCLIP13.61□□□□□ -0.23
ZIC4-202ENST00000425731 MPNDQ8N594 471 aa13.6□□□□□ -0.23
ZIC4-202ENST00000425731 NASPP49321 788 aaPredicted RBP13.6□□□□□ -0.23
ZIC4-202ENST00000425731 C22orf23Q9BZE7 217 aa13.6□□□□□ -0.23
ZIC4-202ENST00000425731 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
ZIC4-202ENST00000425731 TPM2P07951 284 aa13.59□□□□□ -0.23
ZIC4-202ENST00000425731 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
ZIC4-202ENST00000425731 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
ZIC4-202ENST00000425731 FGD5Q6ZNL6 1462 aa13.59□□□□□ -0.23
ZIC4-202ENST00000425731 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.23
ZIC4-202ENST00000425731 CHAF1AQ13111 956 aaPredicted RBP13.57□□□□□ -0.24
ZIC4-202ENST00000425731 ZHX1Q9UKY1 873 aaPredicted RBP13.57□□□□□ -0.24
ZIC4-202ENST00000425731 NUP155O75694 1391 aa13.57□□□□□ -0.24
ZIC4-202ENST00000425731 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
ZIC4-202ENST00000425731 BCL11BQ9C0K0 894 aaPredicted RBP13.57□□□□□ -0.24
ZIC4-202ENST00000425731 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
ZIC4-202ENST00000425731 HNRNPMP52272 730 aaKnown RBP eCLIP13.56□□□□□ -0.24
ZIC4-202ENST00000425731 RNF214Q8ND24 703 aa13.56□□□□□ -0.24
ZIC4-202ENST00000425731 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
ZIC4-202ENST00000425731 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
ZIC4-202ENST00000425731 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
ZIC4-202ENST00000425731 SMC4Q9NTJ3 1288 aa13.54□□□□□ -0.24
ZIC4-202ENST00000425731 CLCN1P35523 988 aa13.54□□□□□ -0.24
ZIC4-202ENST00000425731 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
ZIC4-202ENST00000425731 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
ZIC4-202ENST00000425731 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
ZIC4-202ENST00000425731 PDZRN3Q9UPQ7 1066 aa13.53□□□□□ -0.24
ZIC4-202ENST00000425731 MCTP1Q6DN14 999 aa13.52□□□□□ -0.24
ZIC4-202ENST00000425731 TBC1D2Q9BYX2 928 aa13.52□□□□□ -0.24
ZIC4-202ENST00000425731 IGF1RP08069 1367 aa13.52□□□□□ -0.24
ZIC4-202ENST00000425731 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
ZIC4-202ENST00000425731 CAVIN1Q6NZI2 390 aaKnown RBP13.52□□□□□ -0.25
ZIC4-202ENST00000425731 PDCL3Q9H2J4 239 aa13.52□□□□□ -0.25
ZIC4-202ENST00000425731 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
ZIC4-202ENST00000425731 SAFB2Q14151 953 aaKnown RBP eCLIP13.51□□□□□ -0.25
ZIC4-202ENST00000425731 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
ZIC4-202ENST00000425731 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
ZIC4-202ENST00000425731 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
ZIC4-202ENST00000425731 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
ZIC4-202ENST00000425731 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
ZIC4-202ENST00000425731 UQCRHLA0A096LP55 91 aa13.5□□□□□ -0.25
ZIC4-202ENST00000425731 UQCRHP07919 91 aa13.5□□□□□ -0.25
ZIC4-202ENST00000425731 PTMSP20962 102 aa13.5□□□□□ -0.25
ZIC4-202ENST00000425731 ZNF771Q7L3S4 317 aaPredicted RBP13.5□□□□□ -0.25
ZIC4-202ENST00000425731 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
ZIC4-202ENST00000425731 E9PSI1 815 aa13.5□□□□□ -0.25
ZIC4-202ENST00000425731 DRC7Q8IY82 874 aa13.49□□□□□ -0.25
ZIC4-202ENST00000425731 CASC1Q6TDU7 716 aa13.49□□□□□ -0.25
ZIC4-202ENST00000425731 SEC24BO95487 1268 aa13.49□□□□□ -0.25
ZIC4-202ENST00000425731 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
ZIC4-202ENST00000425731 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
ZIC4-202ENST00000425731 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
ZIC4-202ENST00000425731 MAP7D2Q96T17 732 aa13.47□□□□□ -0.25
ZIC4-202ENST00000425731 NCOA1Q15788 1441 aa13.47□□□□□ -0.25
ZIC4-202ENST00000425731 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.25
ZIC4-202ENST00000425731 PRXQ9BXM0 1461 aa13.46□□□□□ -0.25
ZIC4-202ENST00000425731 ZSCAN30Q86W11 494 aa13.46□□□□□ -0.25
ZIC4-202ENST00000425731 IGHDP01880 384 aa13.46□□□□□ -0.26
ZIC4-202ENST00000425731 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.26
ZIC4-202ENST00000425731 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
ZIC4-202ENST00000425731 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms