RNA–Protein interactions for RNA: ENST00000425346.5

CYB561D2-205, Transcript of cytochrome b561 family member D2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561D2, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561D2-205	ENST00000425346	TCOF1	Q13428	1488 aa	Known RBP	33.85	■■■■□ 3.01
CYB561D2-205	ENST00000425346	PKD2	Q13563	968 aa		33.83	■■■■□ 3.01
CYB561D2-205	ENST00000425346	TSPY4	P0CV99	314 aa		33.82	■■■■□ 3.01
CYB561D2-205	ENST00000425346	TSPY10	P0CW01	314 aa		33.82	■■■■□ 3.01
CYB561D2-205	ENST00000425346	A2ML1	A8K2U0	1454 aa		33.81	■■■■□ 3
CYB561D2-205	ENST00000425346	WASHC2C	Q9Y4E1	1318 aa		33.81	■■■■□ 3
CYB561D2-205	ENST00000425346	DNMT1	P26358	1616 aa	Known RBP	33.79	■■■■□ 3
CYB561D2-205	ENST00000425346	KDM5D	Q9BY66	1539 aa		33.78	■■■■□ 3
CYB561D2-205	ENST00000425346	TNR	Q92752	1358 aa		33.77	■■■■□ 3
CYB561D2-205	ENST00000425346	PZP	P20742	1482 aa		33.77	■■■■□ 3
CYB561D2-205	ENST00000425346	MAP3K1	Q13233	1512 aa		33.75	■■■□□ 2.99
CYB561D2-205	ENST00000425346	IQSEC2	Q5JU85	1478 aa		33.73	■■■□□ 2.99
CYB561D2-205	ENST00000425346	MYOM3	Q5VTT5	1437 aa		33.71	■■■□□ 2.99
CYB561D2-205	ENST00000425346	FAM135A	Q9P2D6	1515 aa		33.69	■■■□□ 2.98
CYB561D2-205	ENST00000425346	MAST1	Q9Y2H9	1570 aa		33.68	■■■□□ 2.98
CYB561D2-205	ENST00000425346	MIA2	Q96PC5	1412 aa		33.68	■■■□□ 2.98
CYB561D2-205	ENST00000425346	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.64	■■■□□ 2.98
CYB561D2-205	ENST00000425346	NEURL4	Q96JN8	1562 aa		33.64	■■■□□ 2.98
CYB561D2-205	ENST00000425346	RNF17	Q9BXT8	1623 aa	Known RBP	33.63	■■■□□ 2.97
CYB561D2-205	ENST00000425346	ABCC3	O15438	1527 aa		33.61	■■■□□ 2.97
CYB561D2-205	ENST00000425346	DISP3	Q9P2K9	1392 aa		33.59	■■■□□ 2.97
CYB561D2-205	ENST00000425346	UBAP1L	F5GYI3	381 aa		33.59	■■■□□ 2.97
CYB561D2-205	ENST00000425346	MROH1	Q8NDA8	1641 aa		33.59	■■■□□ 2.97
CYB561D2-205	ENST00000425346	ILDR2	Q71H61	639 aa		33.58	■■■□□ 2.97
CYB561D2-205	ENST00000425346	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.56	■■■□□ 2.96
CYB561D2-205	ENST00000425346	NLRP1	Q9C000	1473 aa		33.56	■■■□□ 2.96
CYB561D2-205	ENST00000425346	POLR1A	O95602	1720 aa	Predicted RBP	33.56	■■■□□ 2.96
CYB561D2-205	ENST00000425346	ANKLE2	Q86XL3	938 aa		33.55	■■■□□ 2.96
CYB561D2-205	ENST00000425346	ABCC5	O15440	1437 aa		33.54	■■■□□ 2.96
CYB561D2-205	ENST00000425346	UGGT1	Q9NYU2	1555 aa		33.54	■■■□□ 2.96
CYB561D2-205	ENST00000425346	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.53	■■■□□ 2.96
CYB561D2-205	ENST00000425346	RRP7BP	Q9NSQ0	103 aa		33.51	■■■□□ 2.95
CYB561D2-205	ENST00000425346	SPATA31D1	Q6ZQQ2	1576 aa		33.5	■■■□□ 2.95
CYB561D2-205	ENST00000425346	DUOX2	Q9NRD8	1548 aa		33.49	■■■□□ 2.95
CYB561D2-205	ENST00000425346	ERVK-7	P63135	1459 aa		33.49	■■■□□ 2.95
CYB561D2-205	ENST00000425346	SHANK2	Q9UPX8	1470 aa		33.48	■■■□□ 2.95
CYB561D2-205	ENST00000425346	KIF15	Q9NS87	1388 aa		33.48	■■■□□ 2.95
CYB561D2-205	ENST00000425346	ZC3H13	Q5T200	1668 aa	Known RBP	33.47	■■■□□ 2.95
CYB561D2-205	ENST00000425346	CEP152	O94986	1710 aa		33.46	■■■□□ 2.95
CYB561D2-205	ENST00000425346	PTPN23	Q9H3S7	1636 aa		33.46	■■■□□ 2.95
CYB561D2-205	ENST00000425346	MED14	O60244	1454 aa		33.45	■■■□□ 2.95
CYB561D2-205	ENST00000425346	NPHP4	O75161	1426 aa	Predicted RBP	33.45	■■■□□ 2.95
CYB561D2-205	ENST00000425346	CFAP65	Q6ZU64	1925 aa	Known RBP	33.45	■■■□□ 2.94
CYB561D2-205	ENST00000425346	VWDE	Q8N2E2	1590 aa		33.44	■■■□□ 2.94
CYB561D2-205	ENST00000425346	APLP2	Q06481	763 aa		33.44	■■■□□ 2.94
CYB561D2-205	ENST00000425346	DEPDC5	O75140	1603 aa		33.42	■■■□□ 2.94
CYB561D2-205	ENST00000425346	CROCC2	H7BZ55	1655 aa		33.42	■■■□□ 2.94
CYB561D2-205	ENST00000425346	DAPK1	P53355	1430 aa		33.41	■■■□□ 2.94
CYB561D2-205	ENST00000425346	FGD6	Q6ZV73	1430 aa		33.41	■■■□□ 2.94
CYB561D2-205	ENST00000425346	CPS1	P31327	1500 aa		33.39	■■■□□ 2.94
CYB561D2-205	ENST00000425346	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.38	■■■□□ 2.93
CYB561D2-205	ENST00000425346	CHIC2	Q9UKJ5	165 aa		33.38	■■■□□ 2.93
CYB561D2-205	ENST00000425346	ERBIN	Q96RT1	1412 aa		33.37	■■■□□ 2.93
CYB561D2-205	ENST00000425346	PRDM15	P57071	1507 aa	Predicted RBP	33.36	■■■□□ 2.93
CYB561D2-205	ENST00000425346	PIP4K2B	P78356	416 aa		33.34	■■■□□ 2.93
CYB561D2-205	ENST00000425346	ARHGAP31	Q2M1Z3	1444 aa		33.34	■■■□□ 2.93
CYB561D2-205	ENST00000425346	IQGAP1	P46940	1657 aa		33.33	■■■□□ 2.93
CYB561D2-205	ENST00000425346	UBR1	Q8IWV7	1749 aa		33.32	■■■□□ 2.92
CYB561D2-205	ENST00000425346	LTK	P29376	864 aa		33.31	■■■□□ 2.92
CYB561D2-205	ENST00000425346	HSPA1L	P34931	641 aa		33.3	■■■□□ 2.92
CYB561D2-205	ENST00000425346	STRCP1	A6NGW2	1772 aa		33.3	■■■□□ 2.92
CYB561D2-205	ENST00000425346	SCAF1	Q9H7N4	1312 aa	Known RBP	33.3	■■■□□ 2.92
CYB561D2-205	ENST00000425346	ALK	Q9UM73	1620 aa		33.28	■■■□□ 2.92
CYB561D2-205	ENST00000425346	TOM1	O60784	492 aa		33.28	■■■□□ 2.92
CYB561D2-205	ENST00000425346	ANKRD30A	Q9BXX3	1397 aa		33.25	■■■□□ 2.91
CYB561D2-205	ENST00000425346	ARHGAP23	Q9P227	1491 aa		33.24	■■■□□ 2.91
CYB561D2-205	ENST00000425346	SOCS7	O14512	581 aa		33.24	■■■□□ 2.91
CYB561D2-205	ENST00000425346	TXNDC2	Q86VQ3	553 aa		33.24	■■■□□ 2.91
CYB561D2-205	ENST00000425346	SCAF11	Q99590	1463 aa	Known RBP	33.22	■■■□□ 2.91
CYB561D2-205	ENST00000425346	LRRC7	Q96NW7	1537 aa		33.22	■■■□□ 2.91
CYB561D2-205	ENST00000425346	SLIT1	O75093	1534 aa		33.21	■■■□□ 2.91
CYB561D2-205	ENST00000425346	KANK1	Q14678	1352 aa		33.18	■■■□□ 2.9
CYB561D2-205	ENST00000425346	IDI1	Q13907	227 aa		33.18	■■■□□ 2.9
CYB561D2-205	ENST00000425346	PIK3C2B	O00750	1634 aa		33.18	■■■□□ 2.9
CYB561D2-205	ENST00000425346	LMTK2	Q8IWU2	1503 aa		33.17	■■■□□ 2.9
CYB561D2-205	ENST00000425346	FAM50A	Q14320	339 aa	Known RBP	33.16	■■■□□ 2.9
CYB561D2-205	ENST00000425346	TMEM2	Q9UHN6	1383 aa		33.14	■■■□□ 2.9
CYB561D2-205	ENST00000425346	ADGRL2	O95490	1459 aa		33.13	■■■□□ 2.89
CYB561D2-205	ENST00000425346	SYNM	O15061	1565 aa		33.11	■■■□□ 2.89
CYB561D2-205	ENST00000425346	EID1	Q9Y6B2	187 aa		33.09	■■■□□ 2.89
CYB561D2-205	ENST00000425346	NOS1	P29475	1434 aa		33.09	■■■□□ 2.89
CYB561D2-205	ENST00000425346	STAG3	Q9UJ98	1225 aa		33.08	■■■□□ 2.89
CYB561D2-205	ENST00000425346	SENP3	Q9H4L4	574 aa	Predicted RBP	33.06	■■■□□ 2.88
CYB561D2-205	ENST00000425346	EFCAB6	Q5THR3	1501 aa		33.06	■■■□□ 2.88
CYB561D2-205	ENST00000425346	ANKRD50	Q9ULJ7	1429 aa		33.04	■■■□□ 2.88
CYB561D2-205	ENST00000425346	MED1	Q15648	1581 aa	Predicted RBP	33.01	■■■□□ 2.88
CYB561D2-205	ENST00000425346	XIRP1	Q702N8	1843 aa	Known RBP	33	■■■□□ 2.87
CYB561D2-205	ENST00000425346	SLC26A8	Q96RN1	970 aa		33	■■■□□ 2.87
CYB561D2-205	ENST00000425346	KDM5A	P29375	1690 aa	Known RBP	32.98	■■■□□ 2.87
CYB561D2-205	ENST00000425346	TET3	O43151	1660 aa		32.98	■■■□□ 2.87
CYB561D2-205	ENST00000425346	SLC52A1	Q9NWF4	448 aa		32.96	■■■□□ 2.87
CYB561D2-205	ENST00000425346	RBM33	Q96EV2	1170 aa	Known RBP	32.94	■■■□□ 2.86
CYB561D2-205	ENST00000425346	ADGRB3	O60242	1522 aa		32.94	■■■□□ 2.86
CYB561D2-205	ENST00000425346	KCNA6	P17658	529 aa		32.91	■■■□□ 2.86
CYB561D2-205	ENST00000425346	TMEM94	Q12767	1356 aa		32.9	■■■□□ 2.86
CYB561D2-205	ENST00000425346	RPRD2	Q5VT52	1461 aa	Known RBP	32.9	■■■□□ 2.86
CYB561D2-205	ENST00000425346	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.89	■■■□□ 2.86
CYB561D2-205	ENST00000425346	ZFYVE9	O95405	1425 aa		32.85	■■■□□ 2.85
CYB561D2-205	ENST00000425346	MYO5B	Q9ULV0	1848 aa		32.83	■■■□□ 2.85
CYB561D2-205	ENST00000425346	PROSER2	Q86WR7	435 aa	Predicted RBP	32.83	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms