RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 IGSF3O75054 1194 aa8.81□□□□□ -1
LINC00240-202ENST00000424968 PHF12Q96QT6 1004 aa8.8□□□□□ -1
LINC00240-202ENST00000424968 USTQ9Y2C2 406 aa8.8□□□□□ -1
LINC00240-202ENST00000424968 MS4A1P11836 297 aa8.79□□□□□ -1
LINC00240-202ENST00000424968 IRF5Q13568 498 aa8.79□□□□□ -1
LINC00240-202ENST00000424968 MS4A4AQ96JQ5 239 aa8.79□□□□□ -1
LINC00240-202ENST00000424968 CALR3Q96L12 384 aaKnown RBP8.79□□□□□ -1
LINC00240-202ENST00000424968 COG6Q9Y2V7 657 aa8.79□□□□□ -1
LINC00240-202ENST00000424968 MAP3K9P80192 1104 aa8.78□□□□□ -1
LINC00240-202ENST00000424968 DIXDC1Q155Q3 683 aa8.78□□□□□ -1
LINC00240-202ENST00000424968 TMEM259Q4ZIN3 620 aa8.78□□□□□ -1
LINC00240-202ENST00000424968 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
LINC00240-202ENST00000424968 TMC2Q8TDI7 906 aa8.77□□□□□ -1.01
LINC00240-202ENST00000424968 POM121Q96HA1 1249 aa8.77□□□□□ -1.01
LINC00240-202ENST00000424968 PUS7Q96PZ0 661 aaKnown RBP8.77□□□□□ -1.01
LINC00240-202ENST00000424968 EMILIN3Q9NT22 766 aa8.77□□□□□ -1.01
LINC00240-202ENST00000424968 CLCN6P51797 869 aa8.76□□□□□ -1.01
LINC00240-202ENST00000424968 CCDC27Q2M243 656 aa8.76□□□□□ -1.01
LINC00240-202ENST00000424968 GPCPD1Q9NPB8 672 aa8.76□□□□□ -1.01
LINC00240-202ENST00000424968 RSPH4AQ5TD94 716 aa8.75□□□□□ -1.01
LINC00240-202ENST00000424968 GABBR2O75899 941 aa8.74□□□□□ -1.01
LINC00240-202ENST00000424968 FOXK1P85037 733 aa8.73□□□□□ -1.01
LINC00240-202ENST00000424968 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
LINC00240-202ENST00000424968 MAP3K13O43283 966 aa8.72□□□□□ -1.01
LINC00240-202ENST00000424968 OXER1Q8TDS5 423 aa8.72□□□□□ -1.01
LINC00240-202ENST00000424968 USP35Q9P2H5 1018 aa8.72□□□□□ -1.01
LINC00240-202ENST00000424968 SOCS7O14512 581 aa8.71□□□□□ -1.02
LINC00240-202ENST00000424968 OSBPP22059 807 aa8.71□□□□□ -1.02
LINC00240-202ENST00000424968 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
LINC00240-202ENST00000424968 PTGER2P43116 358 aa8.71□□□□□ -1.02
LINC00240-202ENST00000424968 DSG2Q14126 1118 aa8.71□□□□□ -1.02
LINC00240-202ENST00000424968 KIF12Q96FN5 646 aa8.71□□□□□ -1.02
LINC00240-202ENST00000424968 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
LINC00240-202ENST00000424968 PTGDRQ13258 359 aa8.69□□□□□ -1.02
LINC00240-202ENST00000424968 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
LINC00240-202ENST00000424968 DCBLD2Q96PD2 775 aa8.69□□□□□ -1.02
LINC00240-202ENST00000424968 TBC1D12O60347 775 aa8.68□□□□□ -1.02
LINC00240-202ENST00000424968 FECHP22830 423 aa8.68□□□□□ -1.02
LINC00240-202ENST00000424968 B4GALNT3Q6L9W6 998 aa8.68□□□□□ -1.02
LINC00240-202ENST00000424968 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
LINC00240-202ENST00000424968 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
LINC00240-202ENST00000424968 GALR2O43603 387 aaPredicted RBP8.67□□□□□ -1.02
LINC00240-202ENST00000424968 CLK2P49760 499 aaKnown RBP8.67□□□□□ -1.02
LINC00240-202ENST00000424968 SND1Q7KZF4 910 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC00240-202ENST00000424968 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC00240-202ENST00000424968 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
LINC00240-202ENST00000424968 RFC5P40937 340 aa8.66□□□□□ -1.02
LINC00240-202ENST00000424968 MDM2Q00987 491 aaPredicted RBP8.66□□□□□ -1.02
LINC00240-202ENST00000424968 PROCA1Q8NCQ7 364 aaPredicted RBP8.66□□□□□ -1.02
LINC00240-202ENST00000424968 GLMNQ92990 594 aa8.65□□□□□ -1.02
LINC00240-202ENST00000424968 PLPP6Q8IY26 295 aa8.64□□□□□ -1.03
LINC00240-202ENST00000424968 TMEM106CQ9BVX2 250 aa8.64□□□□□ -1.03
LINC00240-202ENST00000424968 CANXP27824 592 aaKnown RBP8.63□□□□□ -1.03
LINC00240-202ENST00000424968 REPIN1Q9BWE0 567 aaKnown RBP8.63□□□□□ -1.03
LINC00240-202ENST00000424968 GDPD2Q9HCC8 539 aa8.63□□□□□ -1.03
LINC00240-202ENST00000424968 OATP04181 439 aa8.62□□□□□ -1.03
LINC00240-202ENST00000424968 ERCC3P19447 782 aa8.62□□□□□ -1.03
LINC00240-202ENST00000424968 ABL2P42684 1182 aa8.62□□□□□ -1.03
LINC00240-202ENST00000424968 MYSM1Q5VVJ2 828 aa8.62□□□□□ -1.03
LINC00240-202ENST00000424968 SNRKQ9NRH2 765 aa8.62□□□□□ -1.03
LINC00240-202ENST00000424968 WASHC4Q2M389 1173 aa8.61□□□□□ -1.03
LINC00240-202ENST00000424968 PPP2R2DQ66LE6 453 aa8.61□□□□□ -1.03
LINC00240-202ENST00000424968 DDX12PQ92771 950 aa8.61□□□□□ -1.03
LINC00240-202ENST00000424968 FAM217BQ9NTX9 383 aaPredicted RBP8.61□□□□□ -1.03
LINC00240-202ENST00000424968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC00240-202ENST00000424968 G3V3G9 751 aa8.59□□□□□ -1.03
LINC00240-202ENST00000424968 IVNS1ABPQ9Y6Y0 642 aa8.59□□□□□ -1.03
LINC00240-202ENST00000424968 VRTNQ9H8Y1 702 aa8.58□□□□□ -1.04
LINC00240-202ENST00000424968 TUSC1Q2TAM9 212 aa8.57□□□□□ -1.04
LINC00240-202ENST00000424968 RBM47A0AV96 593 aaKnown RBP8.55□□□□□ -1.04
LINC00240-202ENST00000424968 TIE1P35590 1138 aa8.55□□□□□ -1.04
LINC00240-202ENST00000424968 ILDR1Q86SU0 546 aaPredicted RBP8.55□□□□□ -1.04
LINC00240-202ENST00000424968 MTMR14Q8NCE2 650 aa8.55□□□□□ -1.04
LINC00240-202ENST00000424968 EPAS1Q99814 870 aa8.55□□□□□ -1.04
LINC00240-202ENST00000424968 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
LINC00240-202ENST00000424968 HDGFL1Q5TGJ6 251 aa8.54□□□□□ -1.04
LINC00240-202ENST00000424968 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
LINC00240-202ENST00000424968 TRPC6Q9Y210 931 aa8.54□□□□□ -1.04
LINC00240-202ENST00000424968 RFX1P22670 979 aa8.53□□□□□ -1.04
LINC00240-202ENST00000424968 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
LINC00240-202ENST00000424968 BMP2KQ9NSY1 1161 aaPredicted RBP8.53□□□□□ -1.04
LINC00240-202ENST00000424968 GNEQ9Y223 722 aaKnown RBP8.53□□□□□ -1.04
LINC00240-202ENST00000424968 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.52□□□□□ -1.05
LINC00240-202ENST00000424968 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
LINC00240-202ENST00000424968 UPF1Q92900 1129 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC00240-202ENST00000424968 BCL11AQ9H165 835 aa8.52□□□□□ -1.05
LINC00240-202ENST00000424968 NDUFB9Q9Y6M9 179 aa8.52□□□□□ -1.05
LINC00240-202ENST00000424968 TTLL13PA6NNM8 815 aa8.51□□□□□ -1.05
LINC00240-202ENST00000424968 ATMINO43313 823 aaPredicted RBP8.51□□□□□ -1.05
LINC00240-202ENST00000424968 EVI5O60447 810 aa8.51□□□□□ -1.05
LINC00240-202ENST00000424968 EIF5BO60841 1220 aaKnown RBP8.51□□□□□ -1.05
LINC00240-202ENST00000424968 PPP1R12CQ9BZL4 782 aa8.51□□□□□ -1.05
LINC00240-202ENST00000424968 POM121CA8CG34 1229 aa8.5□□□□□ -1.05
LINC00240-202ENST00000424968 MAP3K7O43318 606 aa8.5□□□□□ -1.05
LINC00240-202ENST00000424968 POTEIP0CG38 1075 aa8.5□□□□□ -1.05
LINC00240-202ENST00000424968 GJA5P36382 358 aa8.5□□□□□ -1.05
LINC00240-202ENST00000424968 CERKQ8TCT0 537 aa8.5□□□□□ -1.05
LINC00240-202ENST00000424968 TBC1D2BQ9UPU7 963 aa8.5□□□□□ -1.05
LINC00240-202ENST00000424968 C2orf72A6NCS6 295 aa8.49□□□□□ -1.05
LINC00240-202ENST00000424968 ATG7O95352 703 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms