RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 SUPT16HQ9Y5B9 1047 aaKnown RBP6.77□□□□□ -1.33
CKS1BP6-201ENST00000424932 NUP155O75694 1391 aa6.77□□□□□ -1.33
CKS1BP6-201ENST00000424932 PRDM15P57071 1507 aaPredicted RBP6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 TSPY4P0CV99 314 aa6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 TSPY10P0CW01 314 aa6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 PKD2Q13563 968 aa6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 ROCK2O75116 1388 aaKnown RBP6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 USP47Q96K76 1375 aa6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 VWDEQ8N2E2 1590 aa6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 CFAP74Q9C0B2 1584 aa6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 KIAA1210Q9ULL0 1709 aa6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 RTEL1-TNFRSF6BF6WH68 1400 aa6.76□□□□□ -1.33
CKS1BP6-201ENST00000424932 IQGAP1P46940 1657 aa6.75□□□□□ -1.33
CKS1BP6-201ENST00000424932 TRPM2O94759 1503 aa6.75□□□□□ -1.33
CKS1BP6-201ENST00000424932 KIF7Q2M1P5 1343 aa6.75□□□□□ -1.33
CKS1BP6-201ENST00000424932 GPRASP1Q5JY77 1395 aa6.74□□□□□ -1.33
CKS1BP6-201ENST00000424932 MADDQ8WXG6 1647 aa6.74□□□□□ -1.33
CKS1BP6-201ENST00000424932 ATP7AQ04656 1500 aa6.74□□□□□ -1.33
CKS1BP6-201ENST00000424932 PRAG1Q86YV5 1406 aa6.74□□□□□ -1.33
CKS1BP6-201ENST00000424932 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
CKS1BP6-201ENST00000424932 IFT172Q9UG01 1749 aa6.73□□□□□ -1.33
CKS1BP6-201ENST00000424932 DHX29Q7Z478 1369 aaKnown RBP6.73□□□□□ -1.33
CKS1BP6-201ENST00000424932 CCDC144AA2RUR9 1427 aa6.73□□□□□ -1.33
CKS1BP6-201ENST00000424932 A2MP01023 1474 aa6.73□□□□□ -1.33
CKS1BP6-201ENST00000424932 MROH1Q8NDA8 1641 aa6.72□□□□□ -1.33
CKS1BP6-201ENST00000424932 C11orf95C9JLR9 678 aaPredicted RBP6.72□□□□□ -1.33
CKS1BP6-201ENST00000424932 HNRNPMP52272 730 aaKnown RBP eCLIP6.72□□□□□ -1.33
CKS1BP6-201ENST00000424932 PRKRIP1Q9H875 184 aaPredicted RBP6.72□□□□□ -1.33
CKS1BP6-201ENST00000424932 KTN1Q86UP2 1357 aaKnown RBP6.71□□□□□ -1.33
CKS1BP6-201ENST00000424932 KIDINS220Q9ULH0 1771 aa6.71□□□□□ -1.34
CKS1BP6-201ENST00000424932 CLTCL1P53675 1640 aa6.71□□□□□ -1.34
CKS1BP6-201ENST00000424932 COL17A1Q9UMD9 1497 aaPredicted RBP6.71□□□□□ -1.34
CKS1BP6-201ENST00000424932 KIF1BO60333 1816 aa6.71□□□□□ -1.34
CKS1BP6-201ENST00000424932 TRAPPC8Q9Y2L5 1435 aa6.7□□□□□ -1.34
CKS1BP6-201ENST00000424932 EFCAB2Q5VUJ9 269 aa6.7□□□□□ -1.34
CKS1BP6-201ENST00000424932 ZMYM4Q5VZL5 1548 aa6.7□□□□□ -1.34
CKS1BP6-201ENST00000424932 PTPRTO14522 1441 aa6.69□□□□□ -1.34
CKS1BP6-201ENST00000424932 FANCAO15360 1455 aa6.69□□□□□ -1.34
CKS1BP6-201ENST00000424932 EFCAB6Q5THR3 1501 aa6.69□□□□□ -1.34
CKS1BP6-201ENST00000424932 LMTK2Q8IWU2 1503 aa6.68□□□□□ -1.34
CKS1BP6-201ENST00000424932 ZBED9Q6R2W3 1325 aa6.68□□□□□ -1.34
CKS1BP6-201ENST00000424932 MYO3AQ8NEV4 1616 aa6.68□□□□□ -1.34
CKS1BP6-201ENST00000424932 MYOM1P52179 1685 aa6.68□□□□□ -1.34
CKS1BP6-201ENST00000424932 HECW2Q9P2P5 1572 aa6.67□□□□□ -1.34
CKS1BP6-201ENST00000424932 NEFLP07196 543 aa6.67□□□□□ -1.34
CKS1BP6-201ENST00000424932 PPRC1Q5VV67 1664 aaKnown RBP6.67□□□□□ -1.34
CKS1BP6-201ENST00000424932 ADGRL1O94910 1474 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 MYOM2P54296 1465 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 SYNMO15061 1565 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 MAP3K4Q9Y6R4 1608 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 MROH2AA6NES4 1674 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 ZC3H13Q5T200 1668 aaKnown RBP6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 HNRNPUQ00839 825 aaKnown RBP eCLIP6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 ERICH6BQ5W0A0 696 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 STAC3Q96MF2 364 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 ASXL2Q76L83 1435 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 SCAPERQ9BY12 1400 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 ZNF518AQ6AHZ1 1483 aa6.66□□□□□ -1.34
CKS1BP6-201ENST00000424932 ABCA6Q8N139 1617 aa6.65□□□□□ -1.34
CKS1BP6-201ENST00000424932 KDM5AP29375 1690 aaKnown RBP6.65□□□□□ -1.34
CKS1BP6-201ENST00000424932 PPLO60437 1756 aa6.65□□□□□ -1.34
CKS1BP6-201ENST00000424932 CARD11Q9BXL7 1154 aa6.65□□□□□ -1.34
CKS1BP6-201ENST00000424932 MRS2Q9HD23 443 aa6.65□□□□□ -1.34
CKS1BP6-201ENST00000424932 SPAG9O60271 1321 aaKnown RBP6.65□□□□□ -1.35
CKS1BP6-201ENST00000424932 INSRP06213 1382 aa6.65□□□□□ -1.35
CKS1BP6-201ENST00000424932 LRPPRCP42704 1394 aaKnown RBP6.65□□□□□ -1.35
CKS1BP6-201ENST00000424932 FKBP8Q14318 412 aa6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 DCAF11Q8TEB1 546 aa6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 BRD4O60885 1362 aaPredicted RBP6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 PARD3Q8TEW0 1356 aa6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 SMG6Q86US8 1419 aaKnown RBP6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 ADGRB3O60242 1522 aa6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 FRMPD1Q5SYB0 1578 aa6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 SETBP1Q9Y6X0 1596 aa6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 RICTORQ6R327 1708 aa6.64□□□□□ -1.35
CKS1BP6-201ENST00000424932 PIK3C2BO00750 1634 aa6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 KANK1Q14678 1352 aa6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 CAMSAP1Q5T5Y3 1602 aa6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 POGZQ7Z3K3 1410 aa6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 MLH3Q9UHC1 1453 aa6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 NRXN1Q9ULB1 1477 aa6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 WASHC2CQ9Y4E1 1318 aa6.63□□□□□ -1.35
CKS1BP6-201ENST00000424932 NEO1Q92859 1461 aa6.62□□□□□ -1.35
CKS1BP6-201ENST00000424932 ST20-MTHFSA0A0A6YYL1 179 aa6.62□□□□□ -1.35
CKS1BP6-201ENST00000424932 RALBP1Q15311 655 aa6.62□□□□□ -1.35
CKS1BP6-201ENST00000424932 SCAF11Q99590 1463 aaKnown RBP6.61□□□□□ -1.35
CKS1BP6-201ENST00000424932 MYBBP1AQ9BQG0 1328 aaKnown RBP6.61□□□□□ -1.35
CKS1BP6-201ENST00000424932 GLI2P10070 1586 aa6.61□□□□□ -1.35
CKS1BP6-201ENST00000424932 DISP3Q9P2K9 1392 aa6.6□□□□□ -1.35
CKS1BP6-201ENST00000424932 TESK2Q96S53 571 aa6.6□□□□□ -1.35
CKS1BP6-201ENST00000424932 TSHZ2Q9NRE2 1034 aa6.6□□□□□ -1.35
CKS1BP6-201ENST00000424932 DIP2CQ9Y2E4 1556 aa6.6□□□□□ -1.35
CKS1BP6-201ENST00000424932 BLMP54132 1417 aaPredicted RBP6.59□□□□□ -1.35
CKS1BP6-201ENST00000424932 SIGLEC1Q9BZZ2 1709 aa6.59□□□□□ -1.35
CKS1BP6-201ENST00000424932 QRICH2Q9H0J4 1663 aa6.59□□□□□ -1.35
CKS1BP6-201ENST00000424932 RNF123Q5XPI4 1314 aa6.59□□□□□ -1.35
CKS1BP6-201ENST00000424932 USP32Q8NFA0 1604 aa6.59□□□□□ -1.35
CKS1BP6-201ENST00000424932 PNISRQ8TF01 805 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms