RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MS4A1P11836 297 aa14.82□□□□□ -0.04
SEC61A1-202ENST00000424880 SUPT6HQ7KZ85 1726 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-202ENST00000424880 DHX29Q7Z478 1369 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-202ENST00000424880 GZF1Q9H116 711 aaPredicted RBP14.81□□□□□ -0.04
SEC61A1-202ENST00000424880 DENND4BO75064 1496 aaPredicted RBP14.8□□□□□ -0.04
SEC61A1-202ENST00000424880 PLB1Q6P1J6 1458 aa14.8□□□□□ -0.04
SEC61A1-202ENST00000424880 SPRYD3Q8NCJ5 442 aa14.79□□□□□ -0.04
SEC61A1-202ENST00000424880 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
SEC61A1-202ENST00000424880 RAPGEF6Q8TEU7 1601 aa14.77□□□□□ -0.05
SEC61A1-202ENST00000424880 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
SEC61A1-202ENST00000424880 PANK2Q9BZ23 570 aa14.75□□□□□ -0.05
SEC61A1-202ENST00000424880 C8orf34Q49A92 452 aa14.75□□□□□ -0.05
SEC61A1-202ENST00000424880 HSP90AA2PQ14568 343 aaPredicted RBP14.75□□□□□ -0.05
SEC61A1-202ENST00000424880 KDM2AQ9Y2K7 1162 aa14.75□□□□□ -0.05
SEC61A1-202ENST00000424880 KDM6BO15054 1643 aa14.74□□□□□ -0.05
SEC61A1-202ENST00000424880 CARMIL2Q6F5E8 1435 aa14.73□□□□□ -0.05
SEC61A1-202ENST00000424880 PRG4Q92954 1404 aaPredicted RBP14.72□□□□□ -0.05
SEC61A1-202ENST00000424880 CC2D1BQ5T0F9 858 aaKnown RBP14.71□□□□□ -0.05
SEC61A1-202ENST00000424880 TCOF1Q13428 1488 aaKnown RBP14.71□□□□□ -0.06
SEC61A1-202ENST00000424880 SPATA31E1Q6ZUB1 1445 aa14.7□□□□□ -0.06
SEC61A1-202ENST00000424880 USP47Q96K76 1375 aa14.7□□□□□ -0.06
SEC61A1-202ENST00000424880 SEC24BO95487 1268 aa14.7□□□□□ -0.06
SEC61A1-202ENST00000424880 FAM161AQ3B820 660 aa14.7□□□□□ -0.06
SEC61A1-202ENST00000424880 ZNF644Q9H582 1327 aaPredicted RBP14.7□□□□□ -0.06
SEC61A1-202ENST00000424880 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
SEC61A1-202ENST00000424880 ST20-MTHFSA0A0A6YYL1 179 aa14.68□□□□□ -0.06
SEC61A1-202ENST00000424880 MIA2Q96PC5 1412 aa14.68□□□□□ -0.06
SEC61A1-202ENST00000424880 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
SEC61A1-202ENST00000424880 XRCC6P12956 609 aaKnown RBP eCLIP14.66□□□□□ -0.06
SEC61A1-202ENST00000424880 PODXL2Q9NZ53 605 aa14.66□□□□□ -0.06
SEC61A1-202ENST00000424880 CARD11Q9BXL7 1154 aa14.66□□□□□ -0.06
SEC61A1-202ENST00000424880 TROQ12816 1431 aaPredicted RBP14.66□□□□□ -0.06
SEC61A1-202ENST00000424880 ABCA8O94911 1581 aa14.65□□□□□ -0.06
SEC61A1-202ENST00000424880 ATP10BO94823 1461 aa14.64□□□□□ -0.07
SEC61A1-202ENST00000424880 MYBBP1AQ9BQG0 1328 aaKnown RBP14.64□□□□□ -0.07
SEC61A1-202ENST00000424880 ARID3AQ99856 593 aa14.63□□□□□ -0.07
SEC61A1-202ENST00000424880 ANKRD30BQ9BXX2 1392 aa14.63□□□□□ -0.07
SEC61A1-202ENST00000424880 BCORL1Q5H9F3 1711 aa14.63□□□□□ -0.07
SEC61A1-202ENST00000424880 PTPRGP23470 1445 aa14.63□□□□□ -0.07
SEC61A1-202ENST00000424880 KIF14Q15058 1648 aa14.63□□□□□ -0.07
SEC61A1-202ENST00000424880 RRP9O43818 475 aaKnown RBP14.62□□□□□ -0.07
SEC61A1-202ENST00000424880 KDM2BQ8NHM5 1336 aa14.62□□□□□ -0.07
SEC61A1-202ENST00000424880 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
SEC61A1-202ENST00000424880 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
SEC61A1-202ENST00000424880 LRPPRCP42704 1394 aaKnown RBP14.62□□□□□ -0.07
SEC61A1-202ENST00000424880 KTN1Q86UP2 1357 aaKnown RBP14.61□□□□□ -0.07
SEC61A1-202ENST00000424880 A0A0U1RQG5 324 aaPredicted RBP14.6□□□□□ -0.07
SEC61A1-202ENST00000424880 GPATCH8Q9UKJ3 1502 aaKnown RBP14.6□□□□□ -0.07
SEC61A1-202ENST00000424880 ABCC5O15440 1437 aa14.6□□□□□ -0.07
SEC61A1-202ENST00000424880 CENPQQ7L2Z9 268 aaPredicted RBP14.59□□□□□ -0.07
SEC61A1-202ENST00000424880 PLEKHD1A6NEE1 506 aa14.59□□□□□ -0.07
SEC61A1-202ENST00000424880 DAPK1P53355 1430 aa14.58□□□□□ -0.07
SEC61A1-202ENST00000424880 CFDP1Q9UEE9 299 aaPredicted RBP14.58□□□□□ -0.07
SEC61A1-202ENST00000424880 TEX14Q8IWB6 1497 aa14.58□□□□□ -0.08
SEC61A1-202ENST00000424880 KIF15Q9NS87 1388 aa14.58□□□□□ -0.08
SEC61A1-202ENST00000424880 KIF13AQ9H1H9 1805 aa14.58□□□□□ -0.08
SEC61A1-202ENST00000424880 GOLGA6L3A6NEY3 463 aa14.58□□□□□ -0.08
SEC61A1-202ENST00000424880 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
SEC61A1-202ENST00000424880 RPRD2Q5VT52 1461 aaKnown RBP14.58□□□□□ -0.08
SEC61A1-202ENST00000424880 IGHDP01880 384 aa14.57□□□□□ -0.08
SEC61A1-202ENST00000424880 USP19O94966 1318 aa14.57□□□□□ -0.08
SEC61A1-202ENST00000424880 ZNF777Q9ULD5 760 aaPredicted RBP14.56□□□□□ -0.08
SEC61A1-202ENST00000424880 NLRP13Q86W25 1043 aa14.56□□□□□ -0.08
SEC61A1-202ENST00000424880 BRD4O60885 1362 aaPredicted RBP14.56□□□□□ -0.08
SEC61A1-202ENST00000424880 ERBB4Q15303 1308 aa14.56□□□□□ -0.08
SEC61A1-202ENST00000424880 L1TD1Q5T7N2 865 aaKnown RBP14.55□□□□□ -0.08
SEC61A1-202ENST00000424880 ADAMTS8Q9UP79 889 aa14.55□□□□□ -0.08
SEC61A1-202ENST00000424880 ADCY10Q96PN6 1610 aa14.55□□□□□ -0.08
SEC61A1-202ENST00000424880 BCAR3O75815 825 aa14.55□□□□□ -0.08
SEC61A1-202ENST00000424880 UHRF1BP1LA0JNW5 1464 aa14.55□□□□□ -0.08
SEC61A1-202ENST00000424880 PKD2Q13563 968 aa14.54□□□□□ -0.08
SEC61A1-202ENST00000424880 RALBP1Q15311 655 aa14.54□□□□□ -0.08
SEC61A1-202ENST00000424880 DNMT1P26358 1616 aaKnown RBP14.54□□□□□ -0.08
SEC61A1-202ENST00000424880 PDE3BQ13370 1112 aa14.54□□□□□ -0.08
SEC61A1-202ENST00000424880 CAMSAP2Q08AD1 1489 aa14.54□□□□□ -0.08
SEC61A1-202ENST00000424880 ABCC10Q5T3U5 1492 aa14.54□□□□□ -0.08
SEC61A1-202ENST00000424880 GCC2Q8IWJ2 1684 aa14.53□□□□□ -0.08
SEC61A1-202ENST00000424880 CLCN1P35523 988 aa14.53□□□□□ -0.08
SEC61A1-202ENST00000424880 CCDC146Q8IYE0 955 aa14.53□□□□□ -0.08
SEC61A1-202ENST00000424880 RBM10P98175 930 aaKnown RBP14.52□□□□□ -0.08
SEC61A1-202ENST00000424880 ROCK1Q13464 1354 aa14.51□□□□□ -0.09
SEC61A1-202ENST00000424880 RGL3Q3MIN7 710 aa14.5□□□□□ -0.09
SEC61A1-202ENST00000424880 GLI2P10070 1586 aa14.49□□□□□ -0.09
SEC61A1-202ENST00000424880 CDC42BPAQ5VT25 1732 aa14.49□□□□□ -0.09
SEC61A1-202ENST00000424880 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
SEC61A1-202ENST00000424880 BECN1Q14457 450 aa14.49□□□□□ -0.09
SEC61A1-202ENST00000424880 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
SEC61A1-202ENST00000424880 TBC1D2Q9BYX2 928 aa14.49□□□□□ -0.09
SEC61A1-202ENST00000424880 ITSN2Q9NZM3 1697 aa14.48□□□□□ -0.09
SEC61A1-202ENST00000424880 DUSP27Q5VZP5 1158 aa14.48□□□□□ -0.09
SEC61A1-202ENST00000424880 ANTXR1Q9H6X2 564 aa14.48□□□□□ -0.09
SEC61A1-202ENST00000424880 MYH16Q9H6N6 1097 aa14.47□□□□□ -0.09
SEC61A1-202ENST00000424880 ESPNB1AK53 854 aa14.47□□□□□ -0.09
SEC61A1-202ENST00000424880 COG6Q9Y2V7 657 aa14.47□□□□□ -0.09
SEC61A1-202ENST00000424880 TRAK2O60296 914 aa14.46□□□□□ -0.09
SEC61A1-202ENST00000424880 PANK1Q8TE04 598 aa14.46□□□□□ -0.09
SEC61A1-202ENST00000424880 PANK3Q9H999 370 aa14.46□□□□□ -0.09
SEC61A1-202ENST00000424880 DIP2BQ9P265 1576 aa14.46□□□□□ -0.09
SEC61A1-202ENST00000424880 PLEKHH1Q9ULM0 1364 aa14.46□□□□□ -0.09
SEC61A1-202ENST00000424880 NBPF1Q3BBV0 1214 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms