RNA–Protein interactions for RNA: ENST00000424649.6

PXN-204, Transcript of paxillin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PXN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-204ENST00000424649 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.2
PXN-204ENST00000424649 MAGI3Q5TCQ9 1506 aa16.32■□□□□ 0.2
PXN-204ENST00000424649 EPRSP07814 1512 aaKnown RBP16.31■□□□□ 0.2
PXN-204ENST00000424649 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
PXN-204ENST00000424649 SMG6Q86US8 1419 aaKnown RBP16.31■□□□□ 0.2
PXN-204ENST00000424649 ANKRD30AQ9BXX3 1397 aa16.31■□□□□ 0.2
PXN-204ENST00000424649 DAPK1P53355 1430 aa16.31■□□□□ 0.2
PXN-204ENST00000424649 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
PXN-204ENST00000424649 NUP160Q12769 1436 aa16.29■□□□□ 0.2
PXN-204ENST00000424649 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
PXN-204ENST00000424649 ABCC5O15440 1437 aa16.29■□□□□ 0.2
PXN-204ENST00000424649 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
PXN-204ENST00000424649 CLUAP1Q96AJ1 413 aa16.28■□□□□ 0.2
PXN-204ENST00000424649 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
PXN-204ENST00000424649 TMF1P82094 1093 aa16.27■□□□□ 0.2
PXN-204ENST00000424649 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
PXN-204ENST00000424649 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.2
PXN-204ENST00000424649 BACH2Q9BYV9 841 aa16.26■□□□□ 0.19
PXN-204ENST00000424649 ANKRD50Q9ULJ7 1429 aa16.25■□□□□ 0.19
PXN-204ENST00000424649 RPRD2Q5VT52 1461 aaKnown RBP16.25■□□□□ 0.19
PXN-204ENST00000424649 DDRGK1Q96HY6 314 aa16.25■□□□□ 0.19
PXN-204ENST00000424649 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.24■□□□□ 0.19
PXN-204ENST00000424649 APAF1O14727 1248 aa16.24■□□□□ 0.19
PXN-204ENST00000424649 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
PXN-204ENST00000424649 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
PXN-204ENST00000424649 GZF1Q9H116 711 aaPredicted RBP16.22■□□□□ 0.19
PXN-204ENST00000424649 NFKBIBQ15653 356 aa16.22■□□□□ 0.19
PXN-204ENST00000424649 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
PXN-204ENST00000424649 DENND4BO75064 1496 aaPredicted RBP16.21■□□□□ 0.18
PXN-204ENST00000424649 BCAR3O75815 825 aa16.2■□□□□ 0.18
PXN-204ENST00000424649 CHD1O14646 1710 aa16.2■□□□□ 0.18
PXN-204ENST00000424649 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
PXN-204ENST00000424649 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
PXN-204ENST00000424649 COG6Q9Y2V7 657 aa16.2■□□□□ 0.18
PXN-204ENST00000424649 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
PXN-204ENST00000424649 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
PXN-204ENST00000424649 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
PXN-204ENST00000424649 PLB1Q6P1J6 1458 aa16.17■□□□□ 0.18
PXN-204ENST00000424649 MIA2Q96PC5 1412 aa16.17■□□□□ 0.18
PXN-204ENST00000424649 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
PXN-204ENST00000424649 GSE1Q14687 1217 aa16.16■□□□□ 0.18
PXN-204ENST00000424649 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
PXN-204ENST00000424649 PANK1Q8TE04 598 aa16.16■□□□□ 0.18
PXN-204ENST00000424649 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
PXN-204ENST00000424649 KDM5BQ9UGL1 1544 aa16.15■□□□□ 0.18
PXN-204ENST00000424649 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
PXN-204ENST00000424649 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
PXN-204ENST00000424649 UPF2Q9HAU5 1272 aaKnown RBP16.12■□□□□ 0.17
PXN-204ENST00000424649 FAM161AQ3B820 660 aa16.12■□□□□ 0.17
PXN-204ENST00000424649 TEX14Q8IWB6 1497 aa16.11■□□□□ 0.17
PXN-204ENST00000424649 SPATA31E1Q6ZUB1 1445 aa16.1■□□□□ 0.17
PXN-204ENST00000424649 ABCA8O94911 1581 aa16.1■□□□□ 0.17
PXN-204ENST00000424649 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
PXN-204ENST00000424649 MS4A1P11836 297 aa16.09■□□□□ 0.17
PXN-204ENST00000424649 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
PXN-204ENST00000424649 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.17
PXN-204ENST00000424649 CAMSAP2Q08AD1 1489 aa16.08■□□□□ 0.17
PXN-204ENST00000424649 CENPQQ7L2Z9 268 aaPredicted RBP16.08■□□□□ 0.16
PXN-204ENST00000424649 ADCY10Q96PN6 1610 aa16.08■□□□□ 0.16
PXN-204ENST00000424649 TROQ12816 1431 aaPredicted RBP16.08■□□□□ 0.16
PXN-204ENST00000424649 GCC2Q8IWJ2 1684 aa16.08■□□□□ 0.16
PXN-204ENST00000424649 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
PXN-204ENST00000424649 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
PXN-204ENST00000424649 ROCK1Q13464 1354 aa16.07■□□□□ 0.16
PXN-204ENST00000424649 HSP90AA1P07900 732 aaKnown RBP16.06■□□□□ 0.16
PXN-204ENST00000424649 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
PXN-204ENST00000424649 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
PXN-204ENST00000424649 ITSN2Q9NZM3 1697 aa16.05■□□□□ 0.16
PXN-204ENST00000424649 PZPP20742 1482 aa16.05■□□□□ 0.16
PXN-204ENST00000424649 KIF14Q15058 1648 aa16.05■□□□□ 0.16
PXN-204ENST00000424649 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
PXN-204ENST00000424649 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
PXN-204ENST00000424649 MORC1Q86VD1 984 aa16.05■□□□□ 0.16
PXN-204ENST00000424649 MFAP1P55081 439 aaKnown RBP16.04■□□□□ 0.16
PXN-204ENST00000424649 RNF123Q5XPI4 1314 aa16.03■□□□□ 0.16
PXN-204ENST00000424649 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
PXN-204ENST00000424649 BECN1Q14457 450 aa16.03■□□□□ 0.16
PXN-204ENST00000424649 KIF3BO15066 747 aa16.03■□□□□ 0.16
PXN-204ENST00000424649 AFAP1Q8N556 730 aa16.03■□□□□ 0.16
PXN-204ENST00000424649 USP35Q9P2H5 1018 aa16.03■□□□□ 0.16
PXN-204ENST00000424649 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.16
PXN-204ENST00000424649 DNMT1P26358 1616 aaKnown RBP16.02■□□□□ 0.16
PXN-204ENST00000424649 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.15
PXN-204ENST00000424649 STK26Q9P289 416 aa16.02■□□□□ 0.15
PXN-204ENST00000424649 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
PXN-204ENST00000424649 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
PXN-204ENST00000424649 CENPJQ9HC77 1338 aaPredicted RBP16.01■□□□□ 0.15
PXN-204ENST00000424649 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
PXN-204ENST00000424649 POGKQ9P215 609 aa16■□□□□ 0.15
PXN-204ENST00000424649 TNNQ9UQP3 1299 aa16■□□□□ 0.15
PXN-204ENST00000424649 ATP10BO94823 1461 aa16■□□□□ 0.15
PXN-204ENST00000424649 IGHDP01880 384 aa16■□□□□ 0.15
PXN-204ENST00000424649 PTPRGP23470 1445 aa16■□□□□ 0.15
PXN-204ENST00000424649 TPRNQ4KMQ1 711 aa15.99■□□□□ 0.15
PXN-204ENST00000424649 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
PXN-204ENST00000424649 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
PXN-204ENST00000424649 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
PXN-204ENST00000424649 GGT6Q6P531 493 aa15.99■□□□□ 0.15
PXN-204ENST00000424649 SEC24BO95487 1268 aa15.99■□□□□ 0.15
PXN-204ENST00000424649 TMEM132EQ6IEE7 984 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms