RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 WASHC2CQ9Y4E1 1318 aa25.42■■□□□ 1.66
DDR1-234ENST00000424544 PLA2R1Q13018 1463 aa25.41■■□□□ 1.66
DDR1-234ENST00000424544 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
DDR1-234ENST00000424544 ZNF142P52746 1687 aaPredicted RBP25.41■■□□□ 1.66
DDR1-234ENST00000424544 MYO3AQ8NEV4 1616 aa25.41■■□□□ 1.66
DDR1-234ENST00000424544 CEP170BQ9Y4F5 1589 aaPredicted RBP25.4■■□□□ 1.66
DDR1-234ENST00000424544 PKD2Q13563 968 aa25.4■■□□□ 1.66
DDR1-234ENST00000424544 KDM5DQ9BY66 1539 aa25.39■■□□□ 1.66
DDR1-234ENST00000424544 LTBP4Q8N2S1 1624 aa25.39■■□□□ 1.66
DDR1-234ENST00000424544 PZPP20742 1482 aa25.39■■□□□ 1.65
DDR1-234ENST00000424544 TCOF1Q13428 1488 aaKnown RBP25.39■■□□□ 1.65
DDR1-234ENST00000424544 APLP2Q06481 763 aa25.38■■□□□ 1.65
DDR1-234ENST00000424544 A2ML1A8K2U0 1454 aa25.37■■□□□ 1.65
DDR1-234ENST00000424544 TNRQ92752 1358 aa25.35■■□□□ 1.65
DDR1-234ENST00000424544 ABCC5O15440 1437 aa25.35■■□□□ 1.65
DDR1-234ENST00000424544 DNMT1P26358 1616 aaKnown RBP25.33■■□□□ 1.65
DDR1-234ENST00000424544 RNF17Q9BXT8 1623 aaKnown RBP25.33■■□□□ 1.65
DDR1-234ENST00000424544 EIF2AK4Q9P2K8 1649 aaKnown RBP25.3■■□□□ 1.64
DDR1-234ENST00000424544 FGD6Q6ZV73 1430 aa25.29■■□□□ 1.64
DDR1-234ENST00000424544 SHANK2Q9UPX8 1470 aa25.28■■□□□ 1.64
DDR1-234ENST00000424544 DUOX2Q9NRD8 1548 aa25.28■■□□□ 1.64
DDR1-234ENST00000424544 PTPN23Q9H3S7 1636 aa25.28■■□□□ 1.64
DDR1-234ENST00000424544 ABCC3O15438 1527 aa25.27■■□□□ 1.64
DDR1-234ENST00000424544 MROH1Q8NDA8 1641 aa25.27■■□□□ 1.64
DDR1-234ENST00000424544 IQSEC2Q5JU85 1478 aa25.26■■□□□ 1.63
DDR1-234ENST00000424544 ZNF335Q9H4Z2 1342 aaPredicted RBP25.25■■□□□ 1.63
DDR1-234ENST00000424544 DAPK1P53355 1430 aa25.25■■□□□ 1.63
DDR1-234ENST00000424544 NLRP1Q9C000 1473 aa25.25■■□□□ 1.63
DDR1-234ENST00000424544 KIF15Q9NS87 1388 aa25.24■■□□□ 1.63
DDR1-234ENST00000424544 THEMISQ8N1K5 641 aaPredicted RBP25.24■■□□□ 1.63
DDR1-234ENST00000424544 RRP7BPQ9NSQ0 103 aa25.24■■□□□ 1.63
DDR1-234ENST00000424544 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
DDR1-234ENST00000424544 ZC3H13Q5T200 1668 aaKnown RBP25.21■■□□□ 1.63
DDR1-234ENST00000424544 ERBINQ96RT1 1412 aa25.2■■□□□ 1.63
DDR1-234ENST00000424544 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.62
DDR1-234ENST00000424544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.19■■□□□ 1.62
DDR1-234ENST00000424544 ANKLE2Q86XL3 938 aa25.19■■□□□ 1.62
DDR1-234ENST00000424544 ARHGAP31Q2M1Z3 1444 aa25.18■■□□□ 1.62
DDR1-234ENST00000424544 NEURL4Q96JN8 1562 aa25.17■■□□□ 1.62
DDR1-234ENST00000424544 UGGT1Q9NYU2 1555 aa25.17■■□□□ 1.62
DDR1-234ENST00000424544 ERVK-7P63135 1459 aa25.16■■□□□ 1.62
DDR1-234ENST00000424544 PRDM15P57071 1507 aaPredicted RBP25.15■■□□□ 1.62
DDR1-234ENST00000424544 MED14O60244 1454 aa25.15■■□□□ 1.62
DDR1-234ENST00000424544 CHIC2Q9UKJ5 165 aa25.14■■□□□ 1.62
DDR1-234ENST00000424544 ANKRD30AQ9BXX3 1397 aa25.14■■□□□ 1.61
DDR1-234ENST00000424544 DEPDC5O75140 1603 aa25.12■■□□□ 1.61
DDR1-234ENST00000424544 CEP152O94986 1710 aa25.11■■□□□ 1.61
DDR1-234ENST00000424544 POLR1AO95602 1720 aaPredicted RBP25.1■■□□□ 1.61
DDR1-234ENST00000424544 ADGRL2O95490 1459 aa25.09■■□□□ 1.61
DDR1-234ENST00000424544 CFAP65Q6ZU64 1925 aaKnown RBP25.08■■□□□ 1.61
DDR1-234ENST00000424544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.08■■□□□ 1.61
DDR1-234ENST00000424544 VWDEQ8N2E2 1590 aa25.07■■□□□ 1.6
DDR1-234ENST00000424544 NPHP4O75161 1426 aaPredicted RBP25.06■■□□□ 1.6
DDR1-234ENST00000424544 LMTK2Q8IWU2 1503 aa25.06■■□□□ 1.6
DDR1-234ENST00000424544 FAM50AQ14320 339 aaKnown RBP25.04■■□□□ 1.6
DDR1-234ENST00000424544 KANK1Q14678 1352 aa25.03■■□□□ 1.6
DDR1-234ENST00000424544 UBAP1LF5GYI3 381 aa25.02■■□□□ 1.6
DDR1-234ENST00000424544 UBR1Q8IWV7 1749 aa25.01■■□□□ 1.59
DDR1-234ENST00000424544 LTKP29376 864 aa25.01■■□□□ 1.59
DDR1-234ENST00000424544 ARHGAP23Q9P227 1491 aa25.01■■□□□ 1.59
DDR1-234ENST00000424544 CPS1P31327 1500 aa25.01■■□□□ 1.59
DDR1-234ENST00000424544 SLIT1O75093 1534 aa24.99■■□□□ 1.59
DDR1-234ENST00000424544 ANKRD50Q9ULJ7 1429 aa24.98■■□□□ 1.59
DDR1-234ENST00000424544 IDI1Q13907 227 aa24.98■■□□□ 1.59
DDR1-234ENST00000424544 NOS1P29475 1434 aa24.96■■□□□ 1.59
DDR1-234ENST00000424544 TXNDC2Q86VQ3 553 aa24.96■■□□□ 1.59
DDR1-234ENST00000424544 IQGAP1P46940 1657 aa24.96■■□□□ 1.59
DDR1-234ENST00000424544 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
DDR1-234ENST00000424544 TMEM2Q9UHN6 1383 aa24.93■■□□□ 1.58
DDR1-234ENST00000424544 ROCK1Q13464 1354 aa24.91■■□□□ 1.58
DDR1-234ENST00000424544 PIK3C2BO00750 1634 aa24.9■■□□□ 1.58
DDR1-234ENST00000424544 SLC52A1Q9NWF4 448 aa24.9■■□□□ 1.58
DDR1-234ENST00000424544 EFCAB6Q5THR3 1501 aa24.9■■□□□ 1.58
DDR1-234ENST00000424544 TOM1O60784 492 aa24.89■■□□□ 1.58
DDR1-234ENST00000424544 STRCP1A6NGW2 1772 aa24.89■■□□□ 1.57
DDR1-234ENST00000424544 SYNMO15061 1565 aa24.88■■□□□ 1.57
DDR1-234ENST00000424544 KDM5AP29375 1690 aaKnown RBP24.88■■□□□ 1.57
DDR1-234ENST00000424544 EID1Q9Y6B2 187 aa24.88■■□□□ 1.57
DDR1-234ENST00000424544 RPRD2Q5VT52 1461 aaKnown RBP24.87■■□□□ 1.57
DDR1-234ENST00000424544 LRRC7Q96NW7 1537 aa24.86■■□□□ 1.57
DDR1-234ENST00000424544 ALKQ9UM73 1620 aa24.85■■□□□ 1.57
DDR1-234ENST00000424544 STAG3Q9UJ98 1225 aa24.84■■□□□ 1.57
DDR1-234ENST00000424544 DISP3Q9P2K9 1392 aa24.83■■□□□ 1.57
DDR1-234ENST00000424544 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
DDR1-234ENST00000424544 HSPA1LP34931 641 aa24.8■■□□□ 1.56
DDR1-234ENST00000424544 ILDR2Q71H61 639 aa24.8■■□□□ 1.56
DDR1-234ENST00000424544 TET3O43151 1660 aa24.8■■□□□ 1.56
DDR1-234ENST00000424544 UNC13BO14795 1591 aa24.8■■□□□ 1.56
DDR1-234ENST00000424544 PIP4K2BP78356 416 aa24.79■■□□□ 1.56
DDR1-234ENST00000424544 ADGRB3O60242 1522 aa24.76■■□□□ 1.55
DDR1-234ENST00000424544 ZFYVE9O95405 1425 aa24.73■■□□□ 1.55
DDR1-234ENST00000424544 KCNA6P17658 529 aa24.73■■□□□ 1.55
DDR1-234ENST00000424544 ITGAEP38570 1179 aa24.72■■□□□ 1.55
DDR1-234ENST00000424544 SLC26A8Q96RN1 970 aa24.72■■□□□ 1.55
DDR1-234ENST00000424544 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
DDR1-234ENST00000424544 NUP155O75694 1391 aa24.71■■□□□ 1.55
DDR1-234ENST00000424544 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
DDR1-234ENST00000424544 IQGAP3Q86VI3 1631 aa24.7■■□□□ 1.54
DDR1-234ENST00000424544 RRBP1Q9P2E9 1410 aaKnown RBP24.69■■□□□ 1.54
DDR1-234ENST00000424544 E9PCH4 1651 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms