RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 PLA2R1Q13018 1463 aa18.61■□□□□ 0.57
TRBV22-1-201ENST00000424543 KANK4Q5T7N3 995 aaPredicted RBP18.61■□□□□ 0.57
TRBV22-1-201ENST00000424543 CFAP65Q6ZU64 1925 aaKnown RBP18.61■□□□□ 0.57
TRBV22-1-201ENST00000424543 A2ML1A8K2U0 1454 aa18.6■□□□□ 0.57
TRBV22-1-201ENST00000424543 NEURL4Q96JN8 1562 aa18.59■□□□□ 0.57
TRBV22-1-201ENST00000424543 PZPP20742 1482 aa18.58■□□□□ 0.57
TRBV22-1-201ENST00000424543 CEP152O94986 1710 aa18.58■□□□□ 0.57
TRBV22-1-201ENST00000424543 TNRQ92752 1358 aa18.57■□□□□ 0.56
TRBV22-1-201ENST00000424543 RNF17Q9BXT8 1623 aaKnown RBP18.57■□□□□ 0.56
TRBV22-1-201ENST00000424543 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
TRBV22-1-201ENST00000424543 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
TRBV22-1-201ENST00000424543 MROH1Q8NDA8 1641 aa18.55■□□□□ 0.56
TRBV22-1-201ENST00000424543 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
TRBV22-1-201ENST00000424543 IQSEC2Q5JU85 1478 aa18.54■□□□□ 0.56
TRBV22-1-201ENST00000424543 CROCC2H7BZ55 1655 aa18.54■□□□□ 0.56
TRBV22-1-201ENST00000424543 PKD2Q13563 968 aa18.53■□□□□ 0.56
TRBV22-1-201ENST00000424543 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
TRBV22-1-201ENST00000424543 SPATA31D1Q6ZQQ2 1576 aa18.53■□□□□ 0.56
TRBV22-1-201ENST00000424543 ABCC3O15438 1527 aa18.53■□□□□ 0.56
TRBV22-1-201ENST00000424543 FAM135AQ9P2D6 1515 aa18.53■□□□□ 0.56
TRBV22-1-201ENST00000424543 DISP3Q9P2K9 1392 aa18.53■□□□□ 0.56
TRBV22-1-201ENST00000424543 TSPY4P0CV99 314 aa18.52■□□□□ 0.56
TRBV22-1-201ENST00000424543 TSPY10P0CW01 314 aa18.52■□□□□ 0.56
TRBV22-1-201ENST00000424543 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.55
TRBV22-1-201ENST00000424543 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
TRBV22-1-201ENST00000424543 MAP3K1Q13233 1512 aa18.51■□□□□ 0.55
TRBV22-1-201ENST00000424543 RSPH4AQ5TD94 716 aa18.51■□□□□ 0.55
TRBV22-1-201ENST00000424543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRBV22-1-201ENST00000424543 ILDR2Q71H61 639 aa18.49■□□□□ 0.55
TRBV22-1-201ENST00000424543 PTPN23Q9H3S7 1636 aa18.49■□□□□ 0.55
TRBV22-1-201ENST00000424543 UGGT1Q9NYU2 1555 aa18.48■□□□□ 0.55
TRBV22-1-201ENST00000424543 UBAP1LF5GYI3 381 aa18.48■□□□□ 0.55
TRBV22-1-201ENST00000424543 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
TRBV22-1-201ENST00000424543 STRCP1A6NGW2 1772 aa18.45■□□□□ 0.54
TRBV22-1-201ENST00000424543 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
TRBV22-1-201ENST00000424543 ERVK-7P63135 1459 aa18.45■□□□□ 0.54
TRBV22-1-201ENST00000424543 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
TRBV22-1-201ENST00000424543 IQGAP1P46940 1657 aa18.44■□□□□ 0.54
TRBV22-1-201ENST00000424543 DUOX2Q9NRD8 1548 aa18.44■□□□□ 0.54
TRBV22-1-201ENST00000424543 UBR1Q8IWV7 1749 aa18.43■□□□□ 0.54
TRBV22-1-201ENST00000424543 ABCC5O15440 1437 aa18.43■□□□□ 0.54
TRBV22-1-201ENST00000424543 DEPDC5O75140 1603 aa18.42■□□□□ 0.54
TRBV22-1-201ENST00000424543 SHANK2Q9UPX8 1470 aa18.42■□□□□ 0.54
TRBV22-1-201ENST00000424543 NPHP4O75161 1426 aaPredicted RBP18.41■□□□□ 0.54
TRBV22-1-201ENST00000424543 KIF15Q9NS87 1388 aa18.41■□□□□ 0.54
TRBV22-1-201ENST00000424543 PRDM15P57071 1507 aaPredicted RBP18.4■□□□□ 0.54
TRBV22-1-201ENST00000424543 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
TRBV22-1-201ENST00000424543 RRP7BPQ9NSQ0 103 aa18.39■□□□□ 0.53
TRBV22-1-201ENST00000424543 DAPK1P53355 1430 aa18.39■□□□□ 0.53
TRBV22-1-201ENST00000424543 CPS1P31327 1500 aa18.39■□□□□ 0.53
TRBV22-1-201ENST00000424543 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
TRBV22-1-201ENST00000424543 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
TRBV22-1-201ENST00000424543 THEMISQ8N1K5 641 aaPredicted RBP18.37■□□□□ 0.53
TRBV22-1-201ENST00000424543 FGD6Q6ZV73 1430 aa18.37■□□□□ 0.53
TRBV22-1-201ENST00000424543 MED14O60244 1454 aa18.37■□□□□ 0.53
TRBV22-1-201ENST00000424543 ALKQ9UM73 1620 aa18.37■□□□□ 0.53
TRBV22-1-201ENST00000424543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRBV22-1-201ENST00000424543 PIK3C2BO00750 1634 aa18.35■□□□□ 0.53
TRBV22-1-201ENST00000424543 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
TRBV22-1-201ENST00000424543 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
TRBV22-1-201ENST00000424543 APLP2Q06481 763 aa18.33■□□□□ 0.52
TRBV22-1-201ENST00000424543 HSPA1LP34931 641 aa18.31■□□□□ 0.52
TRBV22-1-201ENST00000424543 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
TRBV22-1-201ENST00000424543 XIRP1Q702N8 1843 aaKnown RBP18.3■□□□□ 0.52
TRBV22-1-201ENST00000424543 SCAF11Q99590 1463 aaKnown RBP18.3■□□□□ 0.52
TRBV22-1-201ENST00000424543 SYNMO15061 1565 aa18.29■□□□□ 0.52
TRBV22-1-201ENST00000424543 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
TRBV22-1-201ENST00000424543 ARHGAP31Q2M1Z3 1444 aa18.28■□□□□ 0.52
TRBV22-1-201ENST00000424543 MED1Q15648 1581 aaPredicted RBP18.28■□□□□ 0.52
TRBV22-1-201ENST00000424543 ARHGAP23Q9P227 1491 aa18.27■□□□□ 0.52
TRBV22-1-201ENST00000424543 LTKP29376 864 aa18.27■□□□□ 0.52
TRBV22-1-201ENST00000424543 SLIT1O75093 1534 aa18.27■□□□□ 0.51
TRBV22-1-201ENST00000424543 MYO5BQ9ULV0 1848 aa18.26■□□□□ 0.51
TRBV22-1-201ENST00000424543 SOCS7O14512 581 aa18.26■□□□□ 0.51
TRBV22-1-201ENST00000424543 TOM1O60784 492 aa18.25■□□□□ 0.51
TRBV22-1-201ENST00000424543 ANKRD30AQ9BXX3 1397 aa18.25■□□□□ 0.51
TRBV22-1-201ENST00000424543 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
TRBV22-1-201ENST00000424543 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
TRBV22-1-201ENST00000424543 KANK1Q14678 1352 aa18.23■□□□□ 0.51
TRBV22-1-201ENST00000424543 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
TRBV22-1-201ENST00000424543 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
TRBV22-1-201ENST00000424543 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
TRBV22-1-201ENST00000424543 TMEM2Q9UHN6 1383 aa18.19■□□□□ 0.5
TRBV22-1-201ENST00000424543 ADGRB3O60242 1522 aa18.19■□□□□ 0.5
TRBV22-1-201ENST00000424543 KDM5AP29375 1690 aaKnown RBP18.19■□□□□ 0.5
TRBV22-1-201ENST00000424543 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
TRBV22-1-201ENST00000424543 IDI1Q13907 227 aa18.18■□□□□ 0.5
TRBV22-1-201ENST00000424543 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
TRBV22-1-201ENST00000424543 NOS1P29475 1434 aa18.16■□□□□ 0.5
TRBV22-1-201ENST00000424543 TET3O43151 1660 aa18.15■□□□□ 0.5
TRBV22-1-201ENST00000424543 EID1Q9Y6B2 187 aa18.15■□□□□ 0.5
TRBV22-1-201ENST00000424543 ANKRD50Q9ULJ7 1429 aa18.15■□□□□ 0.5
TRBV22-1-201ENST00000424543 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
TRBV22-1-201ENST00000424543 UNC13BO14795 1591 aa18.13■□□□□ 0.49
TRBV22-1-201ENST00000424543 SLC26A8Q96RN1 970 aa18.13■□□□□ 0.49
TRBV22-1-201ENST00000424543 E9PCH4 1651 aa18.12■□□□□ 0.49
TRBV22-1-201ENST00000424543 PPARGC1BQ86YN6 1023 aaKnown RBP18.11■□□□□ 0.49
TRBV22-1-201ENST00000424543 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
TRBV22-1-201ENST00000424543 TMEM94Q12767 1356 aa18.08■□□□□ 0.49
TRBV22-1-201ENST00000424543 NWD1Q149M9 1564 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms