RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 ZSWIM6Q9HCJ5 1215 aa11.25□□□□□ -0.61
EPHA4-206ENST00000424339 CLIP1P30622 1438 aa11.24□□□□□ -0.61
EPHA4-206ENST00000424339 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
EPHA4-206ENST00000424339 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
EPHA4-206ENST00000424339 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
EPHA4-206ENST00000424339 CEP162Q5TB80 1403 aa11.23□□□□□ -0.61
EPHA4-206ENST00000424339 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
EPHA4-206ENST00000424339 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.61
EPHA4-206ENST00000424339 PTPRGP23470 1445 aa11.21□□□□□ -0.61
EPHA4-206ENST00000424339 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
EPHA4-206ENST00000424339 PTGER2P43116 358 aa11.2□□□□□ -0.62
EPHA4-206ENST00000424339 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
EPHA4-206ENST00000424339 ANKRD13DQ6ZTN6 518 aa11.19□□□□□ -0.62
EPHA4-206ENST00000424339 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
EPHA4-206ENST00000424339 MICALL2Q8IY33 904 aa11.19□□□□□ -0.62
EPHA4-206ENST00000424339 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
EPHA4-206ENST00000424339 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
EPHA4-206ENST00000424339 TMEM92Q6UXU6 159 aa11.16□□□□□ -0.62
EPHA4-206ENST00000424339 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
EPHA4-206ENST00000424339 UHRF1BP1LA0JNW5 1464 aa11.15□□□□□ -0.62
EPHA4-206ENST00000424339 RANGAP1P46060 587 aaPredicted RBP11.15□□□□□ -0.62
EPHA4-206ENST00000424339 ARSIQ5FYB1 569 aa11.14□□□□□ -0.63
EPHA4-206ENST00000424339 UACAQ9BZF9 1416 aa11.14□□□□□ -0.63
EPHA4-206ENST00000424339 ABCA8O94911 1581 aa11.13□□□□□ -0.63
EPHA4-206ENST00000424339 SOX12O15370 315 aa11.13□□□□□ -0.63
EPHA4-206ENST00000424339 ABCC2Q92887 1545 aa11.13□□□□□ -0.63
EPHA4-206ENST00000424339 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
EPHA4-206ENST00000424339 RAPGEF6Q8TEU7 1601 aa11.12□□□□□ -0.63
EPHA4-206ENST00000424339 HECW1Q76N89 1606 aa11.11□□□□□ -0.63
EPHA4-206ENST00000424339 CYB5RLQ6IPT4 315 aa11.11□□□□□ -0.63
EPHA4-206ENST00000424339 FYCO1Q9BQS8 1478 aa11.11□□□□□ -0.63
EPHA4-206ENST00000424339 VPS8Q8N3P4 1428 aa11.1□□□□□ -0.63
EPHA4-206ENST00000424339 CASKIN1Q8WXD9 1431 aa11.1□□□□□ -0.63
EPHA4-206ENST00000424339 PLB1Q6P1J6 1458 aa11.1□□□□□ -0.63
EPHA4-206ENST00000424339 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
EPHA4-206ENST00000424339 CCDC18Q5T9S5 1454 aa11.08□□□□□ -0.64
EPHA4-206ENST00000424339 KDM5BQ9UGL1 1544 aa11.08□□□□□ -0.64
EPHA4-206ENST00000424339 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
EPHA4-206ENST00000424339 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
EPHA4-206ENST00000424339 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
EPHA4-206ENST00000424339 TTBK1Q5TCY1 1321 aaPredicted RBP11.06□□□□□ -0.64
EPHA4-206ENST00000424339 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
EPHA4-206ENST00000424339 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
EPHA4-206ENST00000424339 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
EPHA4-206ENST00000424339 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
EPHA4-206ENST00000424339 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
EPHA4-206ENST00000424339 MAPKBP1O60336 1514 aa11.04□□□□□ -0.64
EPHA4-206ENST00000424339 EPRSP07814 1512 aaKnown RBP11.04□□□□□ -0.64
EPHA4-206ENST00000424339 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
EPHA4-206ENST00000424339 ZCCHC11Q5TAX3 1644 aaKnown RBP11.02□□□□□ -0.64
EPHA4-206ENST00000424339 ATP10BO94823 1461 aa11.02□□□□□ -0.65
EPHA4-206ENST00000424339 RIOK3O14730 519 aaKnown RBP11.01□□□□□ -0.65
EPHA4-206ENST00000424339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
EPHA4-206ENST00000424339 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
EPHA4-206ENST00000424339 ATP1B4Q9UN42 357 aaPredicted RBP10.99□□□□□ -0.65
EPHA4-206ENST00000424339 WDR7Q9Y4E6 1490 aa10.99□□□□□ -0.65
EPHA4-206ENST00000424339 CFAP43Q8NDM7 1665 aa10.98□□□□□ -0.65
EPHA4-206ENST00000424339 PLEKHD1A6NEE1 506 aa10.98□□□□□ -0.65
EPHA4-206ENST00000424339 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
EPHA4-206ENST00000424339 VGFO15240 615 aaPredicted RBP10.97□□□□□ -0.65
EPHA4-206ENST00000424339 ASXL2Q76L83 1435 aa10.97□□□□□ -0.65
EPHA4-206ENST00000424339 CDK13Q14004 1512 aaKnown RBP10.97□□□□□ -0.65
EPHA4-206ENST00000424339 TIAM1Q13009 1591 aa10.97□□□□□ -0.65
EPHA4-206ENST00000424339 LRRIQ1Q96JM4 1722 aa10.97□□□□□ -0.65
EPHA4-206ENST00000424339 PBX2P40425 430 aa10.96□□□□□ -0.65
EPHA4-206ENST00000424339 HCSTQ9UBK5 93 aa10.96□□□□□ -0.65
EPHA4-206ENST00000424339 EHBP1L1Q8N3D4 1523 aa10.95□□□□□ -0.66
EPHA4-206ENST00000424339 TROQ12816 1431 aaPredicted RBP10.95□□□□□ -0.66
EPHA4-206ENST00000424339 NLRP6P59044 892 aa10.95□□□□□ -0.66
EPHA4-206ENST00000424339 MTUS2Q5JR59 1369 aa10.94□□□□□ -0.66
EPHA4-206ENST00000424339 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
EPHA4-206ENST00000424339 NUDT7P0C024 238 aa10.93□□□□□ -0.66
EPHA4-206ENST00000424339 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
EPHA4-206ENST00000424339 KIF14Q15058 1648 aa10.93□□□□□ -0.66
EPHA4-206ENST00000424339 GLI2P10070 1586 aa10.93□□□□□ -0.66
EPHA4-206ENST00000424339 LRRC9Q6ZRR7 1453 aa10.92□□□□□ -0.66
EPHA4-206ENST00000424339 ARID3CA6NKF2 412 aa10.91□□□□□ -0.66
EPHA4-206ENST00000424339 DIP2BQ9P265 1576 aa10.9□□□□□ -0.66
EPHA4-206ENST00000424339 ABCA9Q8IUA7 1624 aa10.9□□□□□ -0.66
EPHA4-206ENST00000424339 SUPT6HQ7KZ85 1726 aaKnown RBP10.89□□□□□ -0.67
EPHA4-206ENST00000424339 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
EPHA4-206ENST00000424339 LHX6Q9UPM6 363 aa10.89□□□□□ -0.67
EPHA4-206ENST00000424339 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
EPHA4-206ENST00000424339 ARAP3Q8WWN8 1544 aa10.88□□□□□ -0.67
EPHA4-206ENST00000424339 MAP3K4Q9Y6R4 1608 aa10.87□□□□□ -0.67
EPHA4-206ENST00000424339 KIF13AQ9H1H9 1805 aa10.86□□□□□ -0.67
EPHA4-206ENST00000424339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.86□□□□□ -0.67
EPHA4-206ENST00000424339 C2orf72A6NCS6 295 aa10.86□□□□□ -0.67
EPHA4-206ENST00000424339 TAOK2Q9UL54 1235 aa10.86□□□□□ -0.67
EPHA4-206ENST00000424339 MYO5CQ9NQX4 1742 aa10.85□□□□□ -0.67
EPHA4-206ENST00000424339 FAM69CQ0P6D2 419 aa10.85□□□□□ -0.67
EPHA4-206ENST00000424339 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
EPHA4-206ENST00000424339 KCNH8Q96L42 1107 aa10.85□□□□□ -0.67
EPHA4-206ENST00000424339 PCDHGA4Q9Y5G9 962 aa10.85□□□□□ -0.67
EPHA4-206ENST00000424339 TEX14Q8IWB6 1497 aa10.85□□□□□ -0.67
EPHA4-206ENST00000424339 ITSN2Q9NZM3 1697 aa10.85□□□□□ -0.67
EPHA4-206ENST00000424339 CD109Q6YHK3 1445 aa10.84□□□□□ -0.67
EPHA4-206ENST00000424339 POTEEQ6S8J3 1075 aa10.84□□□□□ -0.67
EPHA4-206ENST00000424339 PHLDB1Q86UU1 1377 aa10.84□□□□□ -0.67
EPHA4-206ENST00000424339 NCOA2Q15596 1464 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms