RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ZNF518AQ6AHZ1 1483 aa23.28■■□□□ 1.32
CMTM3-202ENST00000424011 EIF4G2P78344 907 aaKnown RBP eCLIP23.27■■□□□ 1.32
CMTM3-202ENST00000424011 MAGI2Q86UL8 1455 aa23.26■■□□□ 1.31
CMTM3-202ENST00000424011 POGZQ7Z3K3 1410 aa23.25■■□□□ 1.31
CMTM3-202ENST00000424011 IQGAP3Q86VI3 1631 aa23.25■■□□□ 1.31
CMTM3-202ENST00000424011 ATP7AQ04656 1500 aa23.25■■□□□ 1.31
CMTM3-202ENST00000424011 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
CMTM3-202ENST00000424011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.31
CMTM3-202ENST00000424011 NBPF8Q3BBV2 869 aa23.22■■□□□ 1.31
CMTM3-202ENST00000424011 HSPA5P11021 654 aaKnown RBP23.21■■□□□ 1.31
CMTM3-202ENST00000424011 MYT1LQ9UL68 1186 aa23.21■■□□□ 1.31
CMTM3-202ENST00000424011 KDM5CP41229 1560 aa23.2■■□□□ 1.31
CMTM3-202ENST00000424011 CCDC144AA2RUR9 1427 aa23.18■■□□□ 1.3
CMTM3-202ENST00000424011 RAPGEF3O95398 923 aa23.18■■□□□ 1.3
CMTM3-202ENST00000424011 MLH3Q9UHC1 1453 aa23.18■■□□□ 1.3
CMTM3-202ENST00000424011 UHRF1BP1Q6BDS2 1440 aa23.16■■□□□ 1.3
CMTM3-202ENST00000424011 KIDINS220Q9ULH0 1771 aa23.16■■□□□ 1.3
CMTM3-202ENST00000424011 DHX29Q7Z478 1369 aaKnown RBP23.16■■□□□ 1.3
CMTM3-202ENST00000424011 ATP10AO60312 1499 aa23.14■■□□□ 1.3
CMTM3-202ENST00000424011 PPRC1Q5VV67 1664 aaKnown RBP23.13■■□□□ 1.29
CMTM3-202ENST00000424011 ANP32EQ9BTT0 268 aa23.13■■□□□ 1.29
CMTM3-202ENST00000424011 KIF13AQ9H1H9 1805 aa23.13■■□□□ 1.29
CMTM3-202ENST00000424011 TSPOAP1O95153 1857 aa23.11■■□□□ 1.29
CMTM3-202ENST00000424011 HECW2Q9P2P5 1572 aa23.11■■□□□ 1.29
CMTM3-202ENST00000424011 DNAJC5Q9H3Z4 198 aa23.11■■□□□ 1.29
CMTM3-202ENST00000424011 KANK1Q14678 1352 aa23.11■■□□□ 1.29
CMTM3-202ENST00000424011 PLA2R1Q13018 1463 aa23.1■■□□□ 1.29
CMTM3-202ENST00000424011 EIF2AK4Q9P2K8 1649 aaKnown RBP23.1■■□□□ 1.29
CMTM3-202ENST00000424011 SPATA31E1Q6ZUB1 1445 aa23.1■■□□□ 1.29
CMTM3-202ENST00000424011 DEPDC5O75140 1603 aa23.09■■□□□ 1.29
CMTM3-202ENST00000424011 RICTORQ6R327 1708 aa23.09■■□□□ 1.29
CMTM3-202ENST00000424011 ANP32CO43423 234 aa23.09■■□□□ 1.29
CMTM3-202ENST00000424011 A2MP01023 1474 aa23.08■■□□□ 1.28
CMTM3-202ENST00000424011 RALGAPBQ86X10 1494 aa23.07■■□□□ 1.28
CMTM3-202ENST00000424011 KIF3BO15066 747 aa23.07■■□□□ 1.28
CMTM3-202ENST00000424011 ZNF326Q5BKZ1 582 aaKnown RBP23.07■■□□□ 1.28
CMTM3-202ENST00000424011 WASHC2AQ641Q2 1341 aa23.07■■□□□ 1.28
CMTM3-202ENST00000424011 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
CMTM3-202ENST00000424011 FRMPD1Q5SYB0 1578 aa23.04■■□□□ 1.28
CMTM3-202ENST00000424011 ABCA6Q8N139 1617 aa23.02■■□□□ 1.28
CMTM3-202ENST00000424011 VWDEQ8N2E2 1590 aa23.02■■□□□ 1.28
CMTM3-202ENST00000424011 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
CMTM3-202ENST00000424011 USP47Q96K76 1375 aa23.01■■□□□ 1.27
CMTM3-202ENST00000424011 PRDM15P57071 1507 aaPredicted RBP23.01■■□□□ 1.27
CMTM3-202ENST00000424011 CCER2I3L3R5 266 aa23■■□□□ 1.27
CMTM3-202ENST00000424011 CCDC7Q96M83 1385 aa23■■□□□ 1.27
CMTM3-202ENST00000424011 TET3O43151 1660 aa23■■□□□ 1.27
CMTM3-202ENST00000424011 ZMYM4Q5VZL5 1548 aa22.99■■□□□ 1.27
CMTM3-202ENST00000424011 YEATS2Q9ULM3 1422 aa22.98■■□□□ 1.27
CMTM3-202ENST00000424011 DIP2CQ9Y2E4 1556 aa22.98■■□□□ 1.27
CMTM3-202ENST00000424011 E9PCH4 1651 aa22.98■■□□□ 1.27
CMTM3-202ENST00000424011 CARD11Q9BXL7 1154 aa22.98■■□□□ 1.27
CMTM3-202ENST00000424011 PTPRTO14522 1441 aa22.97■■□□□ 1.27
CMTM3-202ENST00000424011 TRPM2O94759 1503 aa22.97■■□□□ 1.27
CMTM3-202ENST00000424011 PRAG1Q86YV5 1406 aa22.96■■□□□ 1.27
CMTM3-202ENST00000424011 COL17A1Q9UMD9 1497 aaPredicted RBP22.96■■□□□ 1.27
CMTM3-202ENST00000424011 RGL3Q3MIN7 710 aa22.96■■□□□ 1.27
CMTM3-202ENST00000424011 MROH1Q8NDA8 1641 aa22.96■■□□□ 1.27
CMTM3-202ENST00000424011 ARID4BQ4LE39 1312 aaPredicted RBP22.95■■□□□ 1.26
CMTM3-202ENST00000424011 CNTLNQ9NXG0 1405 aa22.95■■□□□ 1.26
CMTM3-202ENST00000424011 C11orf95C9JLR9 678 aaPredicted RBP22.93■■□□□ 1.26
CMTM3-202ENST00000424011 ROCK2O75116 1388 aaKnown RBP22.93■■□□□ 1.26
CMTM3-202ENST00000424011 STAC3Q96MF2 364 aa22.93■■□□□ 1.26
CMTM3-202ENST00000424011 POLR1AO95602 1720 aaPredicted RBP22.93■■□□□ 1.26
CMTM3-202ENST00000424011 RNF17Q9BXT8 1623 aaKnown RBP22.92■■□□□ 1.26
CMTM3-202ENST00000424011 KIF7Q2M1P5 1343 aa22.92■■□□□ 1.26
CMTM3-202ENST00000424011 BCORL1Q5H9F3 1711 aa22.92■■□□□ 1.26
CMTM3-202ENST00000424011 LMTK2Q8IWU2 1503 aa22.91■■□□□ 1.26
CMTM3-202ENST00000424011 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
CMTM3-202ENST00000424011 GGT6Q6P531 493 aa22.9■■□□□ 1.26
CMTM3-202ENST00000424011 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
CMTM3-202ENST00000424011 TRPM1Q7Z4N2 1603 aa22.88■■□□□ 1.25
CMTM3-202ENST00000424011 EFCAB6Q5THR3 1501 aa22.87■■□□□ 1.25
CMTM3-202ENST00000424011 GPRASP1Q5JY77 1395 aa22.87■■□□□ 1.25
CMTM3-202ENST00000424011 NEURL4Q96JN8 1562 aa22.85■■□□□ 1.25
CMTM3-202ENST00000424011 CEP152O94986 1710 aa22.84■■□□□ 1.25
CMTM3-202ENST00000424011 TSHZ2Q9NRE2 1034 aa22.84■■□□□ 1.25
CMTM3-202ENST00000424011 LAMC1P11047 1609 aa22.83■■□□□ 1.25
CMTM3-202ENST00000424011 SUPT16HQ9Y5B9 1047 aaKnown RBP22.83■■□□□ 1.25
CMTM3-202ENST00000424011 CLTCL1P53675 1640 aa22.83■■□□□ 1.24
CMTM3-202ENST00000424011 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
CMTM3-202ENST00000424011 REREQ9P2R6 1566 aa22.82■■□□□ 1.24
CMTM3-202ENST00000424011 ST20-MTHFSA0A0A6YYL1 179 aa22.81■■□□□ 1.24
CMTM3-202ENST00000424011 ABCC3O15438 1527 aa22.78■■□□□ 1.24
CMTM3-202ENST00000424011 AGLP35573 1532 aa22.77■■□□□ 1.24
CMTM3-202ENST00000424011 NBPF1Q3BBV0 1214 aa22.77■■□□□ 1.24
CMTM3-202ENST00000424011 ARHGEF40Q8TER5 1519 aa22.76■■□□□ 1.23
CMTM3-202ENST00000424011 NPATQ14207 1427 aa22.75■■□□□ 1.23
CMTM3-202ENST00000424011 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
CMTM3-202ENST00000424011 MADDQ8WXG6 1647 aa22.73■■□□□ 1.23
CMTM3-202ENST00000424011 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
CMTM3-202ENST00000424011 PPP6R1Q9UPN7 881 aa22.72■■□□□ 1.23
CMTM3-202ENST00000424011 ARHGAP31Q2M1Z3 1444 aa22.7■■□□□ 1.22
CMTM3-202ENST00000424011 MYOM2P54296 1465 aa22.69■■□□□ 1.22
CMTM3-202ENST00000424011 ZC3H13Q5T200 1668 aaKnown RBP22.69■■□□□ 1.22
CMTM3-202ENST00000424011 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
CMTM3-202ENST00000424011 KIF1BO60333 1816 aa22.68■■□□□ 1.22
CMTM3-202ENST00000424011 SIGLEC1Q9BZZ2 1709 aa22.68■■□□□ 1.22
CMTM3-202ENST00000424011 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
CMTM3-202ENST00000424011 CCDC184Q52MB2 194 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms