RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 IPO8O15397 1037 aaKnown RBP13.79□□□□□ -0.2
TNC-203ENST00000423613 RDXP35241 583 aaKnown RBP13.78□□□□□ -0.2
TNC-203ENST00000423613 KIAA1211Q6ZU35 1233 aa13.78□□□□□ -0.2
TNC-203ENST00000423613 NOL8Q76FK4 1167 aaKnown RBP13.78□□□□□ -0.2
TNC-203ENST00000423613 KANK4Q5T7N3 995 aaPredicted RBP13.78□□□□□ -0.2
TNC-203ENST00000423613 PHF14O94880 888 aa13.78□□□□□ -0.2
TNC-203ENST00000423613 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
TNC-203ENST00000423613 VPS8Q8N3P4 1428 aa13.77□□□□□ -0.21
TNC-203ENST00000423613 ROCK2O75116 1388 aaKnown RBP13.77□□□□□ -0.21
TNC-203ENST00000423613 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
TNC-203ENST00000423613 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
TNC-203ENST00000423613 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
TNC-203ENST00000423613 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
TNC-203ENST00000423613 TCERG1O14776 1098 aaKnown RBP13.76□□□□□ -0.21
TNC-203ENST00000423613 SLC4A3P48751 1232 aa13.76□□□□□ -0.21
TNC-203ENST00000423613 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
TNC-203ENST00000423613 RASSF8Q8NHQ8 419 aa13.75□□□□□ -0.21
TNC-203ENST00000423613 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
TNC-203ENST00000423613 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.75□□□□□ -0.21
TNC-203ENST00000423613 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
TNC-203ENST00000423613 RALBP1Q15311 655 aa13.75□□□□□ -0.21
TNC-203ENST00000423613 MARCH6O60337 910 aa13.74□□□□□ -0.21
TNC-203ENST00000423613 CCDC70Q6NSX1 233 aa13.74□□□□□ -0.21
TNC-203ENST00000423613 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
TNC-203ENST00000423613 RAB3GAP2Q9H2M9 1393 aa13.74□□□□□ -0.21
TNC-203ENST00000423613 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
TNC-203ENST00000423613 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
TNC-203ENST00000423613 LTV1Q96GA3 475 aaPredicted RBP13.73□□□□□ -0.21
TNC-203ENST00000423613 H0YHG0 523 aa13.73□□□□□ -0.21
TNC-203ENST00000423613 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
TNC-203ENST00000423613 TOMM22Q9NS69 142 aa13.73□□□□□ -0.21
TNC-203ENST00000423613 EVA1CP58658 441 aa13.73□□□□□ -0.21
TNC-203ENST00000423613 WWC1Q8IX03 1113 aa13.73□□□□□ -0.21
TNC-203ENST00000423613 FAM43AQ8N2R8 423 aa13.73□□□□□ -0.21
TNC-203ENST00000423613 CNKSR2Q8WXI2 1034 aa13.73□□□□□ -0.21
TNC-203ENST00000423613 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
TNC-203ENST00000423613 PES1O00541 588 aaKnown RBP13.72□□□□□ -0.21
TNC-203ENST00000423613 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
TNC-203ENST00000423613 R3HCC1Q9Y3T6 440 aaKnown RBP13.72□□□□□ -0.21
TNC-203ENST00000423613 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
TNC-203ENST00000423613 CWC15Q9P013 229 aaKnown RBP13.72□□□□□ -0.21
TNC-203ENST00000423613 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
TNC-203ENST00000423613 CWC22Q9HCG8 908 aaKnown RBP13.72□□□□□ -0.21
TNC-203ENST00000423613 NUTM2DQ5VT03 806 aaPredicted RBP13.71□□□□□ -0.21
TNC-203ENST00000423613 NUTM2FA1L443 756 aa13.71□□□□□ -0.21
TNC-203ENST00000423613 RAD21O60216 631 aa13.71□□□□□ -0.21
TNC-203ENST00000423613 CCDC191Q8NCU4 936 aa13.71□□□□□ -0.22
TNC-203ENST00000423613 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
TNC-203ENST00000423613 NUP155O75694 1391 aa13.7□□□□□ -0.22
TNC-203ENST00000423613 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
TNC-203ENST00000423613 DDX49Q9Y6V7 483 aaKnown RBP13.69□□□□□ -0.22
TNC-203ENST00000423613 PMFBP1Q8TBY8 1022 aa13.69□□□□□ -0.22
TNC-203ENST00000423613 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
TNC-203ENST00000423613 AK7Q96M32 723 aa13.68□□□□□ -0.22
TNC-203ENST00000423613 FOXD4L6Q3SYB3 417 aaPredicted RBP13.68□□□□□ -0.22
TNC-203ENST00000423613 FOXD4L3Q6VB84 417 aaPredicted RBP13.68□□□□□ -0.22
TNC-203ENST00000423613 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
TNC-203ENST00000423613 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
TNC-203ENST00000423613 SPAG9O60271 1321 aaKnown RBP13.68□□□□□ -0.22
TNC-203ENST00000423613 GOLGA6L19H0YKK7 550 aa13.67□□□□□ -0.22
TNC-203ENST00000423613 SMC4Q9NTJ3 1288 aa13.67□□□□□ -0.22
TNC-203ENST00000423613 STK31Q9BXU1 1019 aa13.67□□□□□ -0.22
TNC-203ENST00000423613 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
TNC-203ENST00000423613 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
TNC-203ENST00000423613 GPATCH3Q96I76 525 aa13.66□□□□□ -0.22
TNC-203ENST00000423613 ABCC8Q09428 1581 aa13.66□□□□□ -0.22
TNC-203ENST00000423613 HOMER1Q86YM7 354 aa13.66□□□□□ -0.22
TNC-203ENST00000423613 AMPHP49418 695 aa13.66□□□□□ -0.22
TNC-203ENST00000423613 TPD52L1Q16890 204 aaPredicted RBP13.66□□□□□ -0.22
TNC-203ENST00000423613 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
TNC-203ENST00000423613 CLUAP1Q96AJ1 413 aa13.65□□□□□ -0.22
TNC-203ENST00000423613 ANKRD30AQ9BXX3 1397 aa13.65□□□□□ -0.22
TNC-203ENST00000423613 HMMRO75330 724 aa13.65□□□□□ -0.22
TNC-203ENST00000423613 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
TNC-203ENST00000423613 EIF3AQ14152 1382 aaKnown RBP13.64□□□□□ -0.23
TNC-203ENST00000423613 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
TNC-203ENST00000423613 ARGLU1Q9NWB6 273 aaPredicted RBP13.64□□□□□ -0.23
TNC-203ENST00000423613 SKIDA1Q1XH10 827 aa13.64□□□□□ -0.23
TNC-203ENST00000423613 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
TNC-203ENST00000423613 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
TNC-203ENST00000423613 L3MBTL2Q969R5 705 aa13.63□□□□□ -0.23
TNC-203ENST00000423613 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
TNC-203ENST00000423613 SKOR2Q2VWA4 1001 aaPredicted RBP13.63□□□□□ -0.23
TNC-203ENST00000423613 BECN2A8MW95 431 aa13.62□□□□□ -0.23
TNC-203ENST00000423613 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
TNC-203ENST00000423613 CCDC34Q96HJ3 373 aa13.62□□□□□ -0.23
TNC-203ENST00000423613 FMN1Q68DA7 1419 aa13.62□□□□□ -0.23
TNC-203ENST00000423613 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.62□□□□□ -0.23
TNC-203ENST00000423613 SYTL4Q96C24 671 aaPredicted RBP13.62□□□□□ -0.23
TNC-203ENST00000423613 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
TNC-203ENST00000423613 TPM2P07951 284 aa13.61□□□□□ -0.23
TNC-203ENST00000423613 HSP90B2PQ58FF3 399 aa13.61□□□□□ -0.23
TNC-203ENST00000423613 MTERF4Q7Z6M4 381 aaKnown RBP13.61□□□□□ -0.23
TNC-203ENST00000423613 ACBD3Q9H3P7 528 aa13.61□□□□□ -0.23
TNC-203ENST00000423613 MNS1Q8NEH6 495 aa13.61□□□□□ -0.23
TNC-203ENST00000423613 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
TNC-203ENST00000423613 NLRP13Q86W25 1043 aa13.6□□□□□ -0.23
TNC-203ENST00000423613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
TNC-203ENST00000423613 IFT57Q9NWB7 429 aa13.6□□□□□ -0.23
TNC-203ENST00000423613 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms